健美猞猁
0ed2fa3b9b
miniforge3: a new package. ( #16644 )
2020-05-14 19:50:11 -05:00
Michael Kuhn
c168e1b85e
at-spi2-core: Add 2.36.0 ( #16645 )
...
The pkg-config file of newer versions of at-spi2-core includes
dependencies for xtst, recordproto, inputproto and fixesproto, so they
have to be available at runtime as well.
2020-05-14 19:49:02 -05:00
Michael Kuhn
670a5e8766
atk: Add 2.36.0 ( #16646 )
2020-05-14 19:48:21 -05:00
Michael Kuhn
232aa9ff2e
at-spi2-atk: Add 2.34.2 ( #16647 )
2020-05-14 19:47:55 -05:00
Amjad Kotobi
0844e56d6d
r-hmisc: new version and updated dependency ( #16649 )
2020-05-14 19:46:02 -05:00
Amjad Kotobi
1eb5a12019
r-survival: new version and updated dependency ( #16650 )
2020-05-14 19:44:35 -05:00
Greg Becker
445cae5c81
Feature: Allow lmod configuration to set core specs ( #16517 )
...
Packages built with lmod core_compiler are placed in `Core`.
Other packages may belong in `Core`. For example, python may be built with a proprietary compiler for performance, but belong on the `Core` directory.
With this PR, lmod config can include a `core_specs` list. Any package that satisfies a spec in that list is placed in `Core`, regardless of its compiler or dependencies.
2020-05-14 11:27:37 -07:00
Michael Kuhn
20b3e41831
adios2: Fix build with gcc@10: ( #16570 )
2020-05-13 19:46:13 -07:00
Nathan
48a35409e0
Spack Package for ns-3 ( #16630 )
...
* Adding ns3 spack
* Format and cleanup of ns3 spack package
* Removing comments and fixing boost variant
* Fixing formating
2020-05-13 21:16:17 -05:00
Adam J. Stewart
bc948c4418
py-horovod: add new version ( #16635 )
2020-05-13 17:52:27 -05:00
Nathan
c50b586e06
Helics: add python variant ( #16625 )
...
* Adding varient for python interface in HELICS
* Append python interface to pythonpath
* cleaning up blank lines
* Update var/spack/repos/builtin/packages/helics/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-13 17:25:07 -05:00
Greg Becker
7411fe2d43
cmake build system: filter system paths from rpaths ( #16612 )
2020-05-13 14:31:33 -07:00
Ben Bergen
37e307e8cd
Added alias and bash completion for spacktivate ( #16472 )
2020-05-13 12:02:38 -06:00
Nick Booher
f294c264a1
revbayes: Update checksum ( #16628 )
2020-05-13 12:54:21 -05:00
Toyohisa Kameyama
66b896d286
conda4aarch64:New Package. ( #16617 )
2020-05-13 12:49:42 -05:00
Michael Kuhn
a9ee4da670
ncl: Fix build with gcc@10: ( #16624 )
2020-05-13 12:45:12 -05:00
Amjad Kotobi
9b8082ecf3
r-exactextractr: new package ( #16626 )
2020-05-13 12:42:16 -05:00
Nichols A. Romero
fa57f1da29
QE Update May 2020 ( #16627 )
...
* Clarify comments about QMCPACK-to-QE converter.
* Allow hdf5=serial with QE 6.4.1 + qmcpack, but apply filter_file.
* Ammend comments about the use of the filter_file.
2020-05-13 12:41:16 -05:00
lpritch-lanl
043d507540
py-pint: added versions up to v0.11 ( #16537 )
...
Co-authored-by: Lori Pritchett-Sheats <lpritch@pn2002926.lanl.gov>
2020-05-13 16:47:01 +02:00
Michael Kuhn
308f016f31
parallel-netcdf: fix build with gcc@10: ( #16620 )
2020-05-13 16:44:50 +02:00
Amjad Kotobi
f6fbf8b8d3
r-xml2: new version & updated dependencies ( #16604 )
...
* r-xml2: new version & updated dependencies
* r-xml2: updated dependencies
2020-05-13 09:22:53 -05:00
Tomoki, Karatsu
a740c361cd
ppopen-appl-fdm: added support to Fujitsu compilers. ( #16616 )
2020-05-13 15:10:07 +02:00
Toyohisa Kameyama
4777284f08
charmpp: support for aarch64. ( #16619 )
2020-05-13 15:06:25 +02:00
Michael Kuhn
b4052eb3b8
tcsh: fix build with gcc@10: ( #16621 )
2020-05-13 14:57:12 +02:00
Michael Kuhn
aaf3388cfe
esmf: fix build with gcc@10: ( #16622 )
2020-05-13 14:53:49 +02:00
Peter Scheibel
701fc1fdb1
Update docs on "spack external find" ( #16482 )
...
This improves the documentation for `spack external find` in several ways:
* Provide a code example of implementing `determine_spec_details` for a package
* Explain how to define executables to look for (and also e.g. that they are treated as regular expressions and so can pull in unexpected files).
* Add the "why" for a couple of constraints (i.e. explain that this logic only works for build/run deps because it examines `PATH` for executables)
* Spread the docs between build customization and packaging sections
* Add cross-references
* Add a label so that `spack external find` is linked from the command reference.
2020-05-12 17:08:08 -07:00
Chris White
fdf38ec991
Fix axom install target ( #16613 )
2020-05-12 16:57:25 -07:00
Pariksheet Nanda
f43b7824ca
py-plotly: unfix dependency versions ( fixes #16544 ) ( #16546 )
...
* py-plotly: unfix dependency versions (fixes #16544 )
* py-plotly: add missing dependencies for #16546
* py-plotly: match setup.py instead of requirements.txt for #16546
2020-05-12 17:06:18 -05:00
Justin S
0f2a581276
velvetoptimiser: new package at 2.2.6 ( #16611 )
2020-05-12 17:05:19 -05:00
Amjad Kotobi
ab92407940
r-testthat : dependencies and version updated ( #16576 )
...
* r-testthat : dependencies and version updated
* Adding version conditions for dependencies
* r-testthat: Fix dependecies condition
2020-05-12 17:05:01 -05:00
Adam J. Stewart
b4e587bd0b
py-scikit-learn: add new version ( #16607 )
2020-05-12 16:43:56 -05:00
Justin S
1d76067d7a
zstd: add 1.4.4 ( #16608 )
2020-05-12 16:43:43 -05:00
Massimiliano Culpo
11fa61665f
travis: use bionic as default for Linux ( #16521 )
...
Modifications:
- [x] Travis now uses `bionic` as a default (`xenial` used for Python 3.5, `trusty` for Python 2.6)
- [x] Shell unit tests have been factored into their own run
- [x] `kcov` is built only for tests that upload coverage results
Overall with this we shave 3-4 mins. on each run and add an additional run of about 3 min. For some reason `kcov` 38 fails forwarding output when used with Python unit tests, so I used v34 for that and v38 (latest) for shell testing. Previously we were using v25.
2020-05-12 13:56:01 -07:00
Adam J. Stewart
6b41fb88a9
py-threadpoolctl: add new package ( #16606 )
2020-05-12 14:33:10 -05:00
Nick Booher
9bdf4564db
revbayes: update for 1.1.0 ( #16603 )
...
* revbayes: update for 1.1.0
* revbayes: Fix flake8
2020-05-12 14:26:44 -05:00
Greg Becker
0307111dd8
bugfix: reorder variants in Spec strings ( #16462 )
...
* change print order for variants to avoid zsh parsing bugs
* change tests for new variant parse order
2020-05-12 10:23:42 -07:00
Amjad Kotobi
154c0f5771
new version r-rcurl ( #16550 )
...
* new version r-rcurl
* RCurl dependency R version updated
* Adding version conditions
2020-05-12 11:42:58 -05:00
Amjad Kotobi
78d8dd0815
new version r-cli ( #16553 )
...
* new version r-cli
* r-cli : dependencies updated
* Adding version conditions for dependencies
2020-05-12 11:42:20 -05:00
Amjad Kotobi
bfa707dfc4
new version r-ellipsis ( #16556 )
...
* new version r-ellipsis
* r-ellipsis : R dependency updated
* Adding version conditions for dependencies
2020-05-12 11:41:41 -05:00
Amjad Kotobi
d4c8c8b80d
r-rematch2 : new package ( #16563 )
...
* r-rematch2 : new package
* Updating URL
2020-05-12 11:41:20 -05:00
Amjad Kotobi
b99a5369ce
r-roxygen : dependencies and version updated ( #16565 )
...
* r-roxygen : dependencies and version updated
* Dependencies updated for condition
2020-05-12 11:40:55 -05:00
Amjad Kotobi
7528e1eb45
r-purrr : dependencies and version update ( #16566 )
...
* r-purrr : dependencies and version update
* Dependencies updated for condition
2020-05-12 11:39:39 -05:00
Amjad Kotobi
173823e77d
r-rversions : new package ( #16572 )
...
* r-rversions : new package
* URL updated r-rversions
2020-05-12 11:39:08 -05:00
Amjad Kotobi
14b80ecaf2
r-withr : dependencies and version updated ( #16577 )
...
* r-withr : dependencies and version updated
* Adding version conditions for dependencies
2020-05-12 11:36:25 -05:00
Amjad Kotobi
7c327ed447
r-knitr : dependencies and version updated ( #16579 )
...
* r-knitr : dependencies and version updated
* Adding version conditions for dependencies
2020-05-12 11:35:41 -05:00
Tomoki, Karatsu
278f8eb7fe
modylas: Add flag to use preprocessor when building with Fujitsu compiler. ( #16598 )
2020-05-12 11:34:28 -05:00
Jose E. Roman
8b06bd7198
New patch release SLEPc 3.13.2 ( #16601 )
2020-05-12 11:33:46 -05:00
Andrew W Elble
e36aa96392
py-horovod: link dependency for py-torch ( #16600 )
...
fix for same reasons as #16495 .
2020-05-12 11:24:30 -05:00
Toyohisa Kameyama
7813e41464
caffe: fixed build error ( #16520 )
...
* opencv 3.2 requires cmake 3.11 or older.
caffe dependency is changed.
* revert opencv variant to caffe.
backport to opencv errors.
2020-05-12 09:39:19 -05:00
Sergey Kosukhin
d1a5dc792e
py-dask: new version ( #16531 )
...
* py-dask: new version
* py-dask: update the constraints.
* py-dask: add a list of maintainers.
2020-05-12 09:35:11 -05:00
