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Author SHA1 Message Date
Massimiliano Culpo
c14c0d8e74
python: dbm module + version 3.6.4 (#7520) 
A build of python@3.X had the following in the logs:
```
The necessary bits to build these optional modules were not found:
_dbm                  _gdbm                 _tkinter
```
As Tkinter is already a variant, we adopt the same strategy for dbm.
 2018-03-19 22:19:26 +01:00
Adam J. Stewart
3874871512
Add latest version of py-six (#7524) 2018-03-19 16:19:19 -05:00
Adam J. Stewart
aea0b84e90
Add latest version of py-packaging (#7522) 2018-03-19 16:19:05 -05:00
Adam J. Stewart
a84cfb9ad4
Add latest version of GLPK (#7521) 2018-03-19 16:18:42 -05:00
Federico Ficarelli
72fae99a9e modern-wheel: new package (#7514) 
#Fix imports
 2018-03-19 10:43:22 -05:00
Adam J. Stewart
2e9f158a79
Add latest version of libjpeg-turbo (#7518) 2018-03-19 10:41:37 -05:00
Adam J. Stewart
9e4bd6267f
Add latest version of libjpeg (#7517) 2018-03-19 10:41:17 -05:00
Adam J. Stewart
967194ce26
Add latest version of libpng (#7516) 2018-03-19 10:40:56 -05:00
Adam J. Stewart
bb591e675c
Add latest version of nasm (#7515) 2018-03-19 08:50:02 -05:00
Massimiliano Culpo
b2822b2582
glib: updated package and fixed issues with dtrace (#7493) 
fixes #6965
closes #6968
 2018-03-19 06:38:42 +01:00
Jimmy Tang
ba1b3fdc9d Update the patches to work with bazel 0.9.0 (#7013) 
Some code got moved around so the patches needed to be updated
 2018-03-18 08:53:57 -05:00
Hans Pabst
e61b239a8a LIBXSMM 1.9 (#7495) 2018-03-17 18:29:17 -05:00
jthies
e064927fab gmp: add oldish version 5.1.3 with checksum (#7510) 2018-03-17 18:22:42 -05:00
Eric
5a04ad1273 py-multiqc: Add version 1.5 (#7506) 2018-03-17 18:22:12 -05:00
Massimiliano Culpo
49feddf71e
py-performance: added package (#7500) 2018-03-17 20:33:13 +01:00
Massimiliano Culpo
e1290b438b
hwloc: constrain dependency on numactl (#7509) 
fixes #7505
 2018-03-17 18:18:35 +01:00
Massimiliano Culpo
cf4b3f2af6
hwloc: updated package (#7483) 
This includes:

* Added latest available versions (1.11.9, 2.0.0)
* Added variants to enable graphical output from lstopo
* Enabled build of the bundled netloc package if @2.0.0:
* Added dependency from numactl if @:1.11.9
* Added a constraint to avoid using  hwloc@2.0.0 with openmpi
 2018-03-15 10:16:33 +01:00
Robert Pavel
30b8dfbeba Added Tagged Release of ExaMiniMD (#7485) 2018-03-14 18:37:21 -06:00
Michael Kuhn
423f2341bc cube: Fix qt detection (#7242) 
cube's configure only recognizes qt versions with single digit version
components and breaks with qt 5.10. Patch the configure files directly
to avoid having to regenerate them.
 2018-03-14 09:01:11 +01:00
Levi Baber
1cde74656b phylip: new version (#7467) 2018-03-14 08:56:15 +01:00
Sinan
e378044f16 postgresql: add newest version 10.3 (#7455) 2018-03-14 08:54:02 +01:00
Federico Ficarelli
b5879d7d07 Fix extends('tcl') environment (#7473) 2018-03-14 07:02:50 +01:00
Matthias Diener
73dd58b68a Xterm: Fix URL (#7476) 2018-03-14 06:58:42 +01:00
Kelly (KT) Thompson
86f9c9fc73 Provide new package: mscgen. (#7477) 
Mscgen is a small program that parses Message Sequence Chart descriptions and
produces PNG, SVG, EPS or server side image maps (ismaps) as the output.

See http://www.mcternan.me.uk/mscgen/
 2018-03-14 06:56:11 +01:00
Yifan Zhu
5bd8ec8160 r-tfbstools: new package (#7243) 2018-03-13 12:40:41 +01:00
Stephen McDowell
6f76c2124a llvm 6.0.0 released as stable (#7459) 
Relase notes: http://releases.llvm.org/6.0.0/docs/ReleaseNotes.html
 2018-03-13 11:34:19 +01:00
Cyrus Harrison
f8d3a0225f add an option to build tbb statically (#7407) 2018-03-13 08:08:02 +01:00
f-sim
1329f3baca Fix dependency conflict in FEniCS. (#7404) 2018-03-13 08:04:09 +01:00
Federico Ficarelli
b594f89d5e Treat tcl as extendable (#7410) 
* Make tcl package extendable

* Let tk extend tcl

* Fix environment for Tcl extensions
 2018-03-13 10:31:03 +09:00
Denis Davydov
a4ed76c207 arpack-ng: add develop (#7458) 2018-03-12 09:06:37 +01:00
Levi Baber
39bfa12f22 astral: needs zip (#7443) 2018-03-10 10:56:59 +09:00
Patrick Gartung
82aa54151a Fix bug in lua package instroduced by PR #7434 (#7450) 
Fixes issue #7449
 2018-03-09 16:57:46 -08:00
Levi Baber
3945b2adb4 Augustus hash (#7447) 
* augustus: 3.3 package hash changed

* augustus: bamtools libraries now seem to be in lib64

* augustus: fix lib problem with older bamtools
 2018-03-09 16:05:39 -08:00
sknigh
9d3d7d3216 new package: tcptrace (#6993) 
Also added missing deps for libpcap: bison and flex
 2018-03-09 10:46:57 -08:00
Levi Baber
1eeb918f0d new package: cistem (#7438) 2018-03-09 10:19:10 -08:00
Eric
d2f0e57771 new package: py-bcbio-gff (#7129) 2018-03-09 10:14:53 -08:00
Eric
2f97aea4e4 new package: deconseq-standalone (#7290) 2018-03-09 10:13:41 -08:00
Axel Huebl
869c654c37 Boost: More Bintray (#7389) 
There are two additional releases moved to bintray.
Change to bintray for 1.64 and 1.65 as well since SF downloads are
too instable.
 2018-03-09 09:57:41 -08:00
Federico Ficarelli
8ad40babd6 cmake: new version (#7429) 2018-03-09 09:18:58 +01:00
Yifan Zhu
b6440fd10e r-cner: new package (#7228) 2018-03-09 08:36:26 +01:00
Patrick Gartung
331f5f27eb lua package: add lib64 to LUA_PATH and LUA_CPATH (#7434) 
This is needed when using system lua on RHEL and clones where lua
is installed in /usr/lib64. Note that the path entry for lua in
packages.yaml should specify the major/minor version of lua (since
this is used to calculate the lua lib directory)
 2018-03-08 20:18:55 -08:00
Michael Kuhn
74bb15285b json-c: Update to 0.13.1 (#7419) 
* json-c: Update to 0.13.1

0.12.1 does not compile with GCC 7.

* json-c: Add patch to make 0.12.1 build with gcc 7
 2018-03-08 14:25:29 -08:00
jthies
bcde37633d Added new package: ghost (#7362) 2018-03-08 11:16:51 +01:00
Brock Palen
732432df50 hoomd-blue version bump and compiler updated (#7021) 
updated hoomd-blue to latest tagged release in repo.  This version also supports newer gcc6 compilers, so added constraint for older version to avoid breaking existing installs.
 2018-03-08 09:35:59 +01:00
zenln
ad183f652f Added compiler conflict to prank (#7168) 2018-03-08 08:47:46 +01:00
Kelly (KT) Thompson
ac7fef3253 Help newer versions of trilinos/zoltan2 successfully configure. (#7059) 
+ Newer versions of zoltan2 are doing test compiles that link to parmetis.  If
  these checks don't find `metis.h`, the check fails.
+ This small tweak ensures that the zoltan2 configure step can find `metis.h`
  that is provided by spack.
 2018-03-08 08:39:35 +01:00
Yifan Zhu
66c46ae655 New package r-phangorn and its dependencies (#7034) 2018-03-08 08:30:02 +01:00
Levi Baber
98808196cb star: needs zlib (#7418) 2018-03-08 08:27:41 +01:00
Yifan Zhu
64f1fbb2e2 dislin: new package (#7305) 2018-03-08 06:38:17 +01:00
Robert Pavel
1cf451b62c Generalized ExaSP2 Install (#7422) 
Generalized ExaSP2 Install to use glob due to changes in naming
convention between previous release and current development branch
 2018-03-07 15:46:53 -08:00