Commit graph

6958 commits

Author SHA1 Message Date
dependabot[bot]
be48f762a9
build(deps): bump pytest from 8.1.1 to 8.2.0 in /lib/spack/docs (#43908)
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.1.1 to 8.2.0.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](https://github.com/pytest-dev/pytest/compare/8.1.1...8.2.0)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-01 13:29:22 +02:00
Wouter Deconinck
f2d0ba8fcc
PackageStillNeededError: add pkg that needs spec to exception msg (#43845)
* PackageStillNeededError: add pkg that needs spec to exception msg
* PackageStillNeededError: f-string with short fmt and hash
* PackageStillNeededError: split long string
2024-04-30 12:11:47 -07:00
Harmen Stoppels
7f2cedd31f
hack: drop glibc and musl in old concretizer (#43914)
The old concretizer creates a cyclic graph when expanding virtuals for
`iconv`, which is a bug. This hack drops glibc and musl as possible
providers for `iconv` in the old concretizer to work around it.
2024-04-30 13:55:48 +02:00
Harmen Stoppels
3e6e9829da
compiler.py: fix early return (#43898) 2024-04-29 08:53:27 -06:00
Gregory Becker
859745f1a9 Run audits on windows
Add debug log for external detection tests. The debug log
is used to print which test is being executed.

Skip version audit on Windows where appropriate
2024-04-29 14:13:10 +02:00
Massimiliano Culpo
ddabb8b12c
Fix concretization when installing missing compilers (#43876)
Restore the previous behavior when config:install_missing_compilers
is True. The libc of the missing compiler is inferred from the
Python process.
2024-04-29 08:20:33 +02:00
Harmen Stoppels
43f3a35150
gcc: generate spec file and fix external libc default paths after install from cache (#43839)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-04-27 08:49:20 -06:00
Jonathon Anderson
ae9f2d4d40
containers: Add Fedora 40, 39 (#43847) 2024-04-26 20:02:04 -05:00
Massimiliano Culpo
e5edac4d0c
ASP-based solver: update os compatibility for macOS (#43862) 2024-04-26 18:34:46 +02:00
Robert Cohn
1eecbd3208
[intel-oneap-*] no redistribution (#43826) 2024-04-26 12:03:39 +00:00
Massimiliano Culpo
ac9012da0c
spack audit externals: allow selecting platforms and checking extra attributes (#43782) 2024-04-26 12:47:17 +02:00
Harmen Stoppels
d946c37cbb
ldflags=* are compiler flags, not linker flags (#43820)
We run `extend spack_flags_list SPACK_LDFLAGS` for `$mode in ld|ccld`.

That's problematic, cause `ccld` needs `-Wl,--flag` whereas `ld` needs
`--flag` directly. Only `-L` and `-l` are common to compiler & linker.

In all build systems `LDFLAGS` is for the compiler not the linker, cause
any linker flag `-x` can be passed as a compiler flag `-Wl,-x`, and there
are many compiler flags that affect the linker invocation, like `-fopenmp`,
`-fuse-ld=`, `-fsanitize=` etc.

So don't pass `LDFLAGS` to the linker directly.

This way users can set `ldflags: -Wl,--allow-shlib-undefined` in compilers.yaml
to work around an issue where the linker tries to resolve the `libcuda.so.1`
stub lib which cannot be located by design in `cuda`.
2024-04-26 09:19:03 +02:00
Harmen Stoppels
4a40a76291
build_environment.py: expand SPACK_MANAGED_DIRS with realpath (#43844) 2024-04-25 13:33:50 +02:00
Harmen Stoppels
1224a3e8cf
clang.py: detect flang-new (#43815)
If a flang-new exists, which is rather unlikely, it probably means the
user wants it as a fortran compiler.
2024-04-24 19:11:02 +02:00
Peter Scheibel
02cc3ea005
Add new redistribute() directive (#20185)
Some packages can't be redistributed in source or binary form. We need an explicit way to say that in a package.

This adds a `redistribute()` directive so that package authors can write, e.g.:

```python
    redistribute(source=False, binary=False)
```

You can also do this conditionally with `when=`, as with other directives, e.g.:

```python
    # 12.0 and higher are proprietary
    redistribute(source=False, binary=False, when="@12.0:")

    # can't redistribute when we depend on some proprietary dependency
    redistribute(source=False, binary=False, when="^proprietary-dependency")
```


To prevent Spack from adding either their sources or binaries to public mirrors and build caches. You can still unconditionally add things *if* you run either:
* `spack mirror create --private`
* `spack buildcache push --private`

But the default behavior for build caches is not to include non-redistributable packages in either mirrors or build caches.  We have previously done this manually for our public buildcache, but with this we can start maintaining redistributability directly in packages.

Caveats: currently the default for `redistribute()` is `True` for both `source` and `binary`, and you can only set either of them to `False` via this directive.

- [x] add `redistribute()` directive
- [x] add `redistribute_source` and `redistribute_binary` class methods to `PackageBase`
- [x] add `--private` option to `spack mirror`
- [x] add `--private` option to `spack buildcache push`
- [x] test exclusion of packages from source mirror (both as a root and as a dependency)
- [x] test exclusion of packages from binary mirror (both as a root and as a dependency)
2024-04-24 09:41:03 -07:00
John W. Parent
641ab95a31
Revert "Windows: add win-sdk/wgl externals during bootstrapping (#43459)" (#43819)
This reverts commit 9e2558bd56.
2024-04-24 18:24:28 +02:00
Harmen Stoppels
3f1cfdb7d7
libc: from current python process (#43787)
If there's no compiler we currently don't have any external libc for the solver.

This commit adds a fallback on libc from the current Python process, which works if it is dynamically linked.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-04-24 05:10:48 -06:00
Todd Gamblin
aa0825d642
Refactor to improve spec format speed (#43712)
When looking at where we spend our time in solver setup, I noticed a fair bit of time is spent
in `Spec.format()`, and `Spec.format()` is a pretty old, slow, convoluted method.

This PR does a number of things:
- [x] Consolidate most of what was being done manually with a character loop and several
      regexes into a single regex.
- [x] Precompile regexes where we keep them 
- [x] Remove the `transform=` argument to `Spec.format()` which was only used in one 
      place in the code (modules) to uppercase env var names, but added a lot of complexity
- [x] Avoid escaping and colorizing specs unless necessary
- [x] Refactor a lot of the colorization logic to avoid unnecessary object construction
- [x] Add type hints and remove some spots in the code where we were using nonexistent
      arguments to `format()`.
- [x] Add trivial cases to `__str__` in `VariantMap` and `VersionList` to avoid sorting
- [x] Avoid calling `isinstance()` in the main loop of `Spec.format()`
- [x] Don't bother constructing a `string` representation for the result of `_prev_version`
      as it is only used for comparisons.

In my timings (on all the specs formatted in a solve of `hdf5`), this is over 2.67x faster than the 
original `format()`, and it seems to reduce setup time by around a second (for `hdf5`).
2024-04-23 10:52:15 -07:00
Greg Becker
978c20f35a
concretizer: update reuse: default to True (#41302) 2024-04-23 17:42:14 +02:00
Harmen Stoppels
01f61a2eba
Remove import distro from packages and docs (#43772) 2024-04-23 12:47:33 +02:00
Massimiliano Culpo
7d5e27d5e8
Do not detect a compiler without a C compiler (#43778) 2024-04-23 12:20:33 +02:00
Harmen Stoppels
d6baae525f
repo.py: drop deleted packages from provider cache (#43779)
The reverse provider lookup may have stale entries for deleted packages, which used to cause errors. It's hard to invalidate those cache entries, so this commit simply drops entries w/o invalidating the cache.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-04-22 19:03:44 +02:00
Kyle Knoepfel
e1f2612581
Adjust severity of irreversible operations (#43721) 2024-04-22 16:41:53 +02:00
Harmen Stoppels
080fc875eb
compiler.py: reduce verbosity of implicit link dirs parsing (#43777) 2024-04-22 16:07:14 +02:00
Harmen Stoppels
69f417b26a
view: dont warn about externals (#43771)
since it's the status quo on linux after libc as external by default
2024-04-22 16:05:32 +02:00
Harmen Stoppels
80b5106611
bootstrap: no need to add dummy compilers (#43775) 2024-04-22 16:01:41 +02:00
Massimiliano Culpo
34146c197a Add libc dependency to compiled packages and runtime deps
This commit differentiate linux from other platforms by
using libc compatibility as a criterion for deciding
which buildcaches / binaries can be reused. Other
platforms still use OS compatibility.

On linux a libc is injected by all compilers as an implicit
external, and the compatibility criterion is that a libc is
compatible with all other libcs with the same name and a
version that is lesser or equal.

Some concretization unit tests use libc when run on linux.
2024-04-22 15:18:06 +02:00
Harmen Stoppels
209a3bf302 Compiler.default_libc
Some logic to detect what libc the c / cxx compilers use by default,
based on `-dynamic-linker`.

The function `compiler.default_libc()` returns a `Spec` of the form
`glibc@x.y` or `musl@x.y` with the `external_path` property set.

The idea is this can be injected as a dependency.

If we can't run the dynamic linker directly, fall back to `ldd` relative
to the prefix computed from `ld.so.`
2024-04-22 15:18:06 +02:00
Harmen Stoppels
e8c41cdbcb
database.py: stream of json objects forward compat (#43598)
In the future we may transform the database from a single JSON object to
a stream of JSON objects.

This paves the way for constant time writes and constant time rereads
when only O(1) changes are made. Currently both are linear time.

This commit gives just enough forward compat for Spack to produce a
friendly error when we would move to a stream of json objects, and a db
would look like this:

```json
{"database": {"version": "<something newer>"}}
```
2024-04-22 09:43:41 +02:00
Massimiliano Culpo
a450dd31fa
Fix a bug preventing to set platform= on externals (#43758)
closes #43406
2024-04-22 09:15:22 +02:00
Massimiliano Culpo
78b6fa96e5
ci.py: visit all edges (#43761) 2024-04-20 21:29:32 +02:00
Harmen Stoppels
82df0e549d
compiler wrapper: prioritize spack store paths in -L, -I, -rpath (#43593)
* compiler wrapper: prioritize spack managed paths in search order

This commit partitions search paths of -L, -I (and -rpath) into three
groups, from highest priority to lowest:

1. Spack managed directories: these include absolute paths such as
   stores and the stage dir, as well as all relative paths since they
   are relative to a Spack owned dir
2. Non-system dirs: these are for externals that live in non-system
   locations
3. System dirs: your typical `/usr/lib` etc.

It's very easy for Spack to known the prefixes it owns, it's much more
difficult to tell system dirs from non-system dirs. Before this commit
Spack tried to distinguish only system and non-system dirs, and failed
for very trivial cases like `/usr/lib/x/..` which comes up often, since
build systems sometimes copy search paths from `gcc -print-search-dirs`.

Potentially this implementation is even faster than the current state of
things, since a loop over paths is replaced with an eval'ed `case ...`.

* Trigger a pipeline

* Revert "Trigger a pipeline"

This reverts commit 5d7fa863de91c5557ef4432c0ea105ed0924a6e8.

* remove redudant return statement
2024-04-20 13:23:37 -04:00
Harmen Stoppels
f5591f9068
ci.py: simplify, and dont warn excessively about externals (#43759) 2024-04-20 15:09:54 +02:00
Harmen Stoppels
44cb4eca93
environment.py: fix excessive re-reads (#43746) 2024-04-19 13:39:34 -06:00
Harmen Stoppels
74640987c7
ruamel yaml: fix quadratic complexity bug (#43745) 2024-04-19 14:33:42 +02:00
John W. Parent
6fba31ce34
Windows: Update MSVC + oneAPI detection and integration (#43646)
* Later versions of oneAPI have moved, so update detection to find it
  in both old and new location
* Remove reliance on ONEAPI_ROOT env variable when determining Fortran
  compiler version for %msvc
* When finding a Fortran compiler for MSVC, there was logic enforcing
  a maximum MSVC version for a given oneAPI Fortran version. This
  mapping was out of date and excluding valid combinations, so has
  been removed (the logic now just picks the latest available
  oneAPI Fortran compiler for any given MSVC version).
2024-04-18 21:53:56 +00:00
John W. Parent
9e2558bd56
Windows: add win-sdk/wgl externals during bootstrapping (#43459)
On Windows, bootstrapping logic now searches for and adds the win-sdk
and wgl packages to the user's top scope as externals if they are not
present.

These packages are generally required to install most packages with
Spack on Windows, and are only available as externals, so it is
assumed that doing this automatically would be useful and avoid
a mandatory manual step for each new Spack instance.

Note this is the first case of bootstrapping logic modifying
configuration other than the bootstrap configuration.
2024-04-18 10:20:04 -07:00
Tamara Dahlgren
36ea208e12
Twitter->X: Reflect the name (only) change (#43690) 2024-04-18 08:52:54 -07:00
Kyle Knoepfel
17e0774189
Make sure variable is None if exception is raised. (#43707) 2024-04-18 08:50:15 -07:00
Massimiliano Culpo
7cad6c62a3
Associate condition sets from cli to root node (#43710)
This PR prevents a condition_set from having nodes that are not associated with the corresponding root node through some (transitive) dependencies.
2024-04-18 17:27:12 +02:00
Harmen Stoppels
eb2ddf6fa2 asp.py: do not copy 2024-04-18 15:39:26 +02:00
Harmen Stoppels
2bc2902fed spec.py: early return in __str__ 2024-04-18 15:39:26 +02:00
Todd Gamblin
eefe0b2eec
Improve spack find output in environments (#42334)
This adds some improvements to `spack find` output when in environments based
around some thoughts about what users want to know when they're in an env.

If you're working in an enviroment, you mostly care about:
* What are the roots
* Which ones are installed / not installed
* What's been added that still needs to be concretized

So, this PR adds a couple tweaks to display that information more clearly:

- [x] We now display install status next to every root. You can easily see
      which are installed and which aren't.

- [x] When you run `spack find -l` in an env, the roots now show their concrete
      hash (if they've been concretized). They previously would show `-------`
      (b/c the root spec itself is abstract), but showing the concretized root's
      hash is a lot more useful.

- [x] Newly added/unconcretized specs still show `-------`, which now makes more
      sense, b/c they are not concretized.

- [x] There is a new option, `-r` / `--only-roots` to *only* show env roots if
      you don't want to look at all the installed specs.

- [x] Roots in the installed spec list are now highlighted as bold. This is
      actually an old feature from the first env implementation , but various
      refactors had disabled it inadvertently.
2024-04-17 16:22:05 +00:00
John W. Parent
de3b324983
Windows filesystem utilities (bugfix): improve SFN usage (#43645)
Reduce incidence of spurious errors by:
* Ensuring we're passing the buffer by reference
* Get the correct short string size from Windows API instead of computing ourselves
* Ensure sufficient space for null terminator character

Add test for `windows_sfn`
2024-04-16 11:02:02 -07:00
Harmen Stoppels
9ff5a30574
concretize.lp: fix issue with reuse of conditional variants (#43676)
Currently if you request pkg +example where example is a conditional
variant, and you have a pkg in the database for which the condition
did not hold (so no +example nor ~example), the solver would reuse it
regardless, not imposing +example.

The change rules out exactly one thing: variant_set without variant_value,
which in practice could only happen when not node_has_variant (i.e. when
under the current package.py rules the variant's when condition did not
trigger).
2024-04-16 16:09:32 +00:00
Todd Gamblin
f9f97bf22b
tests: Spec tests shouldn't fetch remote git repositories. (#43656)
Currently, some of the tests in `spec_format` and `spec_semantics` fetch
the actual zlib repository when run, because they call `str()` on specs
like `zlib@foo/bar`, which at least currently requires a remote git clone
to resolve.

This doesn't change the behavior of git versions, but it uses our mock git
repo infrastructure and clones the `git-test` package instead of the *real*
URL from the mock `zlib` package.

This should speed up tests.  We could probably refactor more so that the git
tests *all* use such a fixture, but the `checks` field that unfortunately
tightly couples the mock git repository and the `git_fetch` tests complicates
this. We could also consider *not* making `str()` resolve git versions, but
I did not dig into that here.

- [x] add a mock_git_test_package fixture that sets up a mock git repo *and*
      monkeypatches the `git-test` package (like our git test packages do)
- [x] use fixture in `test_spec_format_path`
- [x] use fixture in `test_spec_format_path_posix`
- [x] use fixture in `test_spec_format_path_windows`
- [x] use fixture in `test_parse_single_spec`
2024-04-15 09:20:23 -07:00
dependabot[bot]
1a7baadbff
build(deps): bump python-levenshtein in /lib/spack/docs (#43543)
Bumps [python-levenshtein](https://github.com/rapidfuzz/python-Levenshtein) from 0.25.0 to 0.25.1.
- [Release notes](https://github.com/rapidfuzz/python-Levenshtein/releases)
- [Changelog](https://github.com/rapidfuzz/python-Levenshtein/blob/main/HISTORY.md)
- [Commits](https://github.com/rapidfuzz/python-Levenshtein/compare/v0.25.0...v0.25.1)

---
updated-dependencies:
- dependency-name: python-levenshtein
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-04-15 18:00:24 +02:00
Adam J. Stewart
381acb3726
Build systems: fix docstrings (#43618) 2024-04-15 17:01:52 +02:00
dependabot[bot]
7903f9fcfd
build(deps): bump black from 24.3.0 to 24.4.0 in /lib/spack/docs (#43642)
Bumps [black](https://github.com/psf/black) from 24.3.0 to 24.4.0.
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](https://github.com/psf/black/compare/24.3.0...24.4.0)

---
updated-dependencies:
- dependency-name: black
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-04-15 16:40:37 +02:00
Chris White
6d244b3f67
remove hardcoded hipcc (#43644) 2024-04-12 19:38:15 -06:00