* libint: updated version, ported to AutotoolsPackage
* elpa: updated version, ported to AutotoolsPackage
* wannier90: updated version, ported to MakefilePackage
* pexsi: updated version, ported to MakefilePackage
* cp2k: updated version, removed wannier 90 from dependencies if cp2k@4.1
* plumed: updated version
Modifications:
* modules has been turned into a single variant, as different versions
have different modules available
* added dictionaries for patches
* netlib-scalapack: ported to CMakePackage
* Add Blast+ package.
Adds support for NCBI's blast+@2.6.0. I'll be adding a few historical versions in the near future.
It's a fairly direct transliteration of the [Homebrew Science recipe][hbs].
I skipped the mysql support.
There is a problem with HDF5 support. Blast's configure script test program defines a macro 'HOST' to a string value and one of the HDF5 bits has an variable named 'HOST'. Fun things happen. I've disabled support for now.
I've run very very basic tests. I'll get this out to my users and ensure that it works and fine tune the options and etc....
[hbs]: https://github.com/Homebrew/homebrew-science/blob/master/blast.rb
* Flake8 fixes
* Update w.t.r. mamelara's PR and cleanup
Add paths to things in the --with-* config args
Add add'l config flags from #3394.
Update patch to no-op and add comment.
Add add'l dependencies after studying `configure --help`.
* Flake8 cleanup
* Add support for blast+@2.2.30
Need to work around a configure bug. See https://github.com/Homebrew/homebrew-science/issues/2337#issuecomment-170011511.
* Re-wrap comment, line length not a problem.
I'd broken a comment across to line in a fit of flake8
induced fear. Adam pointed out that it's ok.
* Remove explicit prefix config
Remove explicit prefix config, the autotools package does it for us.
* Added packages for Structural Simulation Toolkit and Dumpi trace
* sst-dumpi deps
Remove extraneous dependency from sst-dumpi
* Removed redundant function and fake-url from sst-dumpi package
* Fixed URL, Added git branches, requested changes
sst-dumpi version listed as 6.1, made an upstream change to 6.1.0
sst-macro and sst-dumpi can be installed as v6.1.0 and master branch
* Added bootstrap. Tweaked URLs and description
- Spack find would fail with "unknown namespace" for some queries when a
package from an unknown namespace was installed.
- Solve by being conservative: assume unknown packages are NOT providers
of virtual dependencies.
- deactivate -a wouldn't work if the installation's package was no longer
available.
- Fix installed_extensions_for so that it doesn't need to look at the
package.py file.
- drop old TCL support from paraview build.
- add +plugins variant to have include directories installed. This is
enabled by default since the additional diskspace for includes is
really minimal and since this also allows re-use of the VTK libraries
from ParaView without necessarily requiring a separate VTK
installation.
- +opengl2 is now the default. As per all newer VTK and paraview versions.
BUG: broken install for paraview-5.0.1 with includes and without python
- incorrect conditional for ui_pqExportStateWizard.h when python is
disabled and includes are to be installed.
gcc compiler detection patch.
These have both been fixed in paraview 5.3.0
ENH: refactor as a CMakePackage.
- Note that "spack install paraview" works as expected, but
"spack build paraview" fails in weird unrelated ways.
