Commit graph

18358 commits

Author SHA1 Message Date
perrymil
fbb127c46a
raxml-ng: new package at v1.0.1 (#20223) 2020-12-04 22:56:24 +01:00
Ben Morgan
0dd628d0d3
geant4, geant4-data: versions 10.6.3 and 10.7.0 (#20250)
Update geant4-data and individual datasets for Geant4 versions 10.6.3
and 10.7.0.

Update geant4 package with new versions 10.6.3 and 10.7.0. Update
dependencies on CLHEP and VecGeom with versions required for Geant4
10.7.

Add GEANT4_INSTALL_PACKAGE_CACHE=OFF to CMake args for 10.6 onwards.
Prevents install of the "package cahce" file that contains hard-coded
paths for dependencies, improving relocatability. It relies on Spack
setting CMAKE_PREFIX_PATH correctly in build/use environments that
consume the geant4 package.
2020-12-04 13:22:47 -05:00
Harmen Stoppels
984ae7e695
Also allow --rpath as rpath linker flags (#18473) 2020-12-04 12:29:55 -05:00
Massimiliano Culpo
8b74b50cff
concretizer: restrict maximizing variant values to MV variants (#20194) 2020-12-04 16:27:03 +01:00
TAKAHASHI Shuuji
98517af024
postgresql: added xml variant (#20224) 2020-12-04 12:27:52 +01:00
arjun-raj-kuppala
321298b115
AMD ROCm - Bump up rocalution with 3.9.0 and 3.10.0 releases (#20243) 2020-12-04 11:23:55 +01:00
Sreenivasa Murthy Kolam
5c0ac61a95
Added v3.10.0 for miopengemm, rocm-opencl and rocm (#20235) 2020-12-04 10:21:10 +01:00
Erik Schnetter
2d3e491845
amrex: constrain cmake if using cuda 11 (#20237)
`cmake @3.17:` is necessary to handle `cuda @11:` correctly. Earlier versions of `cmake` do not know that `cuda @11:` does not support `compute_30` any more, and list that compute capability as supported. This is handled in `cmake`'s file `Modules/FindCUDA/select_compute_arch.cmake`.
2020-12-04 10:16:35 +01:00
Ethan Stam
f391b2e8e5
py-cinemasci: new package at v1.3 (#20239) 2020-12-04 10:13:45 +01:00
Howard Pritchard
61f0f840d4
libtheora: patch for png_sizeof issue (#20240)
See

https://gitlab.freedesktop.org/gstreamer/cerbero/blob/master/recipes/libtheora/0004-examples-Don-t-use-png_sizeof.patch

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-12-04 10:12:44 +01:00
George Hartzell
9afaaa3c25
bowtie2: fix installation prefix (#20205)
The bowtie2 Makefile uses `prefix`, not `PREFIX`, for versions before v2.4.

Credit to @tkameyama

Co-authored-by: george.hartzell <george.hartzell@sana.com>
2020-12-04 09:59:59 +01:00
eugeneswalker
badf3368ad
allow install of build-deps from cache via --include-build-deps switch (#19955)
* allow install of build-deps from cache via --include-build-deps switch

* make clear that --include-build-deps is useful for CI pipeline troubleshooting
2020-12-03 15:27:01 -08:00
Matthias Wolf
794b60f7e7
environment installs: fix reporting. (#20004)
PR #15702 changed the invocation of the report context when installing
specs, do the same when building environments.
2020-12-03 15:04:13 -08:00
Greg Becker
d6765fe95d
avoid circular import (#20236) 2020-12-03 13:54:09 -08:00
Andrew W Elble
09aae616c7
concretizer: call inject_patches_variants() on the roots of the specs (#20203)
As was done in the old concretizer. Fixes an issue where conditionally
patched dependencies did not show up in spec (gdal+jasper)
2020-12-03 16:28:34 +01:00
Sreenivasa Murthy Kolam
39be60ab92
bump up version for rocm_3.10.0 rel (#20229) 2020-12-03 14:28:51 +01:00
Sreenivasa Murthy Kolam
a1b9a00a13
bumpup the version for rocm-3.10.0 release (#20227) 2020-12-03 12:40:54 +01:00
Danny Taller
e22e037e30
Add CARE package, fixes for ROCmPackage and subclasses (#20070)
* use develop version of blt with fixes for rocm

* package updates for care+rocm

* fixes for plain cpu build

* add camp dependency on raja
2020-12-02 17:07:56 -08:00
Danny Taller
f37adc71f0
fix harmen branch (#20216) 2020-12-02 22:49:24 +01:00
Massimiliano Culpo
05848c87c5
concretizer: try hard to infer the real version of compilers (#20099)
fixes #20055

Compiler with custom versions like gcc@foo are not currently
matched to the appropriate targets. This is because the
version of spec doesn't match the "real" version of the
compiler.

This PR replicates the strategy used in the original
concretizer to deal with that and tries to detect the real
version of compilers if the version in the spec returns no
results.
2020-12-02 20:30:28 +01:00
fcannini
007ff2a6b0
namd: added cuda support (#20143) 2020-12-02 20:22:12 +01:00
Justin S
651bd50d86
py-mikado: new package at 20201016 (#20186) 2020-12-02 20:20:27 +01:00
Desmond Orton
c65090bac1
blast-plus: added v2.11.0 (#20024)
Co-authored-by: Dan Han <las_danhan@iastate.edu>
2020-12-02 20:02:14 +01:00
Andrew W Elble
881c4e87df
pmix/openpmix: added v3.2.1 and v3.1.5 (#20087) 2020-12-02 19:36:30 +01:00
Sreenivasa Murthy Kolam
ff4c45289e
bump up version for rocm-3.10.0 release (#20214)
* bump up version for rocm-3.10.0 release

* bump up version for rocm-3.10.0

* remove duplicate version addition for 3.9.0

* bump up version for rocm-3.10.0 release

* bump up version for rocm-3.10.0 release

* bump up version for rocm-debug-agent and rocm-dbgapi

* bump up version for rocm-bandwidth-test,rocm-gdb,rocprofiler,roctracer for rocm-3.10.0
2020-12-02 12:33:40 -06:00
Justin S
6d0e8d760a
r-loo: added v2.3.1 (#20075) 2020-12-02 19:33:21 +01:00
Adam J. Stewart
80b6b768df
G2O: add new package (#20165) 2020-12-02 19:30:26 +01:00
Adam J. Stewart
898ac9f9c2
libqglviewer: build dylib instead of Framework (#20178) 2020-12-02 19:23:31 +01:00
Andrew W Elble
3c25ae5130
py-ucx-py: added new package at v0.16.0 (#20093)
Added also py-pynvml
2020-12-02 19:15:23 +01:00
mic84
5deeff89f3
amrex: added v20.12 (#20200) 2020-12-02 19:05:55 +01:00
Howard Pritchard
d84c59c9a0
libtheora: patch autogen.sh to avoid (#20008)
configure problem when spack runs the configure stage of its build/install pipeline

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-12-02 10:24:37 -06:00
Harmen Stoppels
b0baf42988
Fix hipcc once more (#20095) 2020-12-02 15:58:58 +01:00
Toyohisa Kameyama
e575a38d96
py-tensorlow: use mkdtemp for temporary directory. (#20212) 2020-12-02 08:45:30 -06:00
Ghorban M. Tavakoly
954a3aab62
gdbm: fix link errors with aocc (#20206) 2020-12-02 13:53:29 +01:00
ketsubouchi
d9ccce9689
py-numpy: add fj Fortran library options (#20210) 2020-12-02 13:45:03 +01:00
Massimiliano Culpo
44c1beaf3a
boost: disable find_package's config mode for boost prior to v1.70.0 (#20198) 2020-12-02 12:25:57 +01:00
ketsubouchi
47ac7da244
openexr: changed build system to autotools (#20209) 2020-12-02 11:10:47 +01:00
Nichols A. Romero
0d988700ba
QMCPACK: added v3.10.0 and updates to package recipe (#20199)
* cuda_arch value must be explictly set.

* QMCPACK LaTeX manual now converted to reStructuredText and directory no longer exists.
2020-12-02 11:07:46 +01:00
Nithin Senthil Kumar
a3005d4a7c
mvapich2: added v2.3.5 (#20211)
Co-authored-by: nithintsk <nithintsk@github.com>
2020-12-02 11:01:49 +01:00
Andrew W Elble
0c326e87a9
concretizer: don't optimize emitting version_satisfies() (#20128)
When all versions were allowed a version_satisfies rule was not emitted,
and this caused conditional directives to fail.
2020-12-02 09:53:53 +01:00
AMD Toolchain Support
721fdddde4
namd, charmpp: patch to allow build with AMD Toolchain support (#20083)
Co-authored-by: mohan babu <mohbabul@amd.com>
2020-12-02 09:46:54 +01:00
Jieyang Chen
c0bbf5454c
Add smoke test to VTK-m package (#19816)
* add smoke test

* remove whitespaces

* fix minimum version issue

* reorder decorators & replace make with cmake build

* merge cmake build into one line

* reorganize smoke test function

Co-authored-by: Jieyang Chen <chenj3@ornl.gov>
2020-12-01 17:59:44 -06:00
MichaelLaufer
59106c4dec
Fixes compile time errors (#20006)
Co-authored-by: michael laufer <michael.laufer@toganetworks.com>
2020-12-01 16:21:19 -06:00
Christian Goll
235558df11
dockerfiles: add dockerfile for opensuse leap 15 (#20091)
* added dockerfile for opensuse leap 15
* updated maintainer info
* Update share/spack/docker/leap-15.dockerfile
* move copies and symlinks after package install
also use ${SPACK_ROOT} for spack calls as
this works with buildah

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-12-01 14:03:35 -08:00
Seth R. Johnson
42ed6e25e1
pugixml: add 1.11 and update variants (#20175) 2020-12-01 14:26:08 -05:00
Tom Payerle
5d248a3c67
New package: py-qsymm (#19455)
* New package: py-qsymm

* py-qsymm: Convert to using tarballs from PyPi instead of git checkouts

* py-qsymm: add missing dependencies

* Update var/spack/repos/builtin/packages/py-qsymm/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-qsymm: Fix url to use pypi hidden download interface

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-12-01 13:25:12 -06:00
Harmen Stoppels
32e23f5324
mpich: fix autotools deps for mpich 3.3.x (#20176)
Issue is fixed in 3.4.x
2020-12-01 18:46:32 +01:00
Massimiliano Culpo
7c01ba8fea
spec: return early from concretization if a spec is already concrete (#20196) 2020-12-01 18:09:14 +01:00
Justin S
b43202f433
mummer4: add 4.0.0rc1 (#20183) 2020-12-01 17:42:15 +01:00
AMD Toolchain Support
ec1eddb6e7
AOCC-2.3.0 is now added to spack (#20089)
* AOCC-2.3.0 is now added to spack

Change-Id: I18fd9606e6fd9a288cc7dc6c6ead11ea17839a7c

* Added flag and version tests for AOCC-2.3.0

* Addressed review comments

Co-authored-by: vkallesh <Vijay-teekinavar.Kallesh@amd.com>
2020-12-01 08:07:58 -06:00