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7838 commits

Author SHA1 Message Date
Michael Kuhn
b61dd57fdc sublime-text: Miscellaneous improvements (#11154) 
- Add 3.2.1
- Reformat versions to include proper upstream version tags
- Add gtk dependency
- Add prefix to PATH so sublime_text can be found
 2019-04-17 13:44:34 -07:00
Oliver Breitwieser
f276b3ffa0 ruby: Install certificate for +openssl only (#11184) 
If specifying ~openssl, the post-install step will still try to install
the non-existent certificate, leading to an IOError.
 2019-04-17 13:03:58 -05:00
Christoph Junghans
c628ca99cf gromacs: added 2019 patch releases (#11211) 2019-04-17 12:48:06 -05:00
Satish Balay
4731041f88
strumpack@3.1.1: add patch for Intel-19 build failure on cori (#11204) 
Ref: https://github.com/spack/spack/issues/11202
 2019-04-17 12:10:05 -05:00
Justin S
01ada1a3de astral: add 5.6.1 (#11195) 2019-04-17 09:32:50 -05:00
sknigh
e372464611 Add llvm 8.0.0 (#11197) 2019-04-17 09:31:42 -05:00
Michael Kuhn
ea2a85dbd3 lz4: Add 1.9.0 (#11207) 2019-04-17 09:30:23 -05:00
Michael Kuhn
3028f5674c zstd: Add 1.4.0 (#11208) 2019-04-17 09:29:52 -05:00
sknigh
308805cd54 Added rust 1.34.0 (#11200) 2019-04-16 18:32:11 -05:00
sknigh
a287ad6edd Added openmpi 3.1.4 (#11201) 
* Added openmpi 3.1.4

* fix suffix comment
 2019-04-16 18:31:54 -05:00
Matthias Mayr
e07cf4d661 New package: CLN library (#11167) 2019-04-16 16:03:51 -07:00
Frédéric Simonis
2ef7287a3b precice package: add versions and dependencies (#11176) 
* Add versions 1.4.0, 1.3.0, and 1.2.0
* Add dependencies and update constraints (e.g. version 1.4.0 of
  precice requires a later version of boost)
* Add maintainers
 2019-04-16 12:38:08 -07:00
Nichols A. Romero
9a79a2345d QMCPACK package: Remove Spack MKL hack for older version (#11127) 
A Spack hack for MKL usage was needed in QMCPACK prior to version 3.5
when non-Intel compilers were used. This Spack hack could have
undesirable side-effects and led to ugly code that was extra work to
maintain. For older versions of QMCPACK, we throw a conflict if you
want to use Intel MKL with the other compilers commonly found on x86.

Note that there is no impact to version of QMCPACK since 3.5.
 2019-04-16 12:04:40 -07:00
Satish Balay
c25d162b3c
superlu-dist: fix issue with adding system blas/lapack - when MKL is explicitly specified (#11187) 
Version 6 added dependency on LAPACK - so additional -DTPL_LAPACK_LIBRARIES option is required

Ref: https://github.com/xiaoyeli/superlu_dist/issues/36
Ref: https://github.com/spack/spack/issues/10173
 2019-04-16 08:52:48 -05:00
Jordan Ogas
a49de9eb09 add charliecloud 0.9.9 (#11190) 2019-04-15 17:59:10 -05:00
Matthias Diener
dd97cf9315 cmake: add version 3.14.2 (#11192) 2019-04-15 17:17:24 -05:00
Denis Davydov
06a17ef052 pixman: fix patch (#11173) 2019-04-15 14:49:02 +02:00
Denis Davydov
0341e19540 boost: add 1.70.0 (#11183) 2019-04-15 09:59:04 +02:00
Oliver Breitwieser
dadbd723a3 verilator: Fix FlexLexer.h not found (#11185) 
Similar to #10956 flex needs to be a link-dependency for verilator in
order for FlexLexer.h to be found during install.
 2019-04-15 09:56:07 +02:00
Satish Balay
5b5e00aaa9 petsc4py: add verson 3.11.0 (#11186) 
Also added maintainers
 2019-04-15 09:54:40 +02:00
Mark C. Miller
1ae7477d20 Update FASTMath metapackage (#11171) 
* Limit to FASTMath-only packages
* Replace boxlib with amrex

As requested by @asalmgren
 2019-04-12 16:54:19 -05:00
Satish Balay
832a1ddbaa
petsc: add fftw variant (#11178) 2019-04-12 09:46:23 -05:00
Satish Balay
1eab6e3c86
petsc: add version 3.11.1 (#11179) 2019-04-12 09:45:43 -05:00
Owen Solberg
227f9c9026 py-deeptools: adding release 3.2.1 sha256 sum (#11174) 2019-04-12 09:45:04 +02:00
Satish Balay
6b09781936
xsdk@develop: enable amrex@develop+sundials (#11169) 2019-04-11 12:16:23 -05:00
Cody Balos
0d0358733d amrex: add sundials variant (#11147) 2019-04-11 10:43:11 -05:00
brietzke
d0e281e201 libxsmm package: add variant to build generator executables (#11114) 2019-04-10 16:34:38 -07:00
clellsolomon
7ec12c59ab fzf package: change mirror and add vim plugin (#10920) 
This commit edits the Makefile to use github.com mirrors rather than the
default mirrors of the dependency packages installed by GO.
 2019-04-10 16:23:37 -07:00
Chuck Atkins
f1bdaa11d4 New Packages: ecp-io-sdk and ecp-viz-sdk (#11073) 2019-04-10 16:18:05 -07:00
Eric Martin
8f1ebfc73c py-requests: Add missing dependencies for versions 2.16.0 and up (#10996) 2019-04-10 15:38:28 -07:00
Patrick Gartung
a5315f3878
Fix bug when system perl is used. (#11034) 
* Fix bug when system perl is used.

If system perl is being used through packages.yaml there cannot be dependent modules.
The  setup_dependent_packages function should not do anything in that case.
 2019-04-10 08:44:27 -05:00
Denis Davydov
1e9748a3c8 dealii: fix build with tbb from intel parallel studio (#11138) 2019-04-10 14:51:38 +02:00
Denis Davydov
b2611c8086 suite-sparse: fix tbb patching (#11155) 2019-04-10 09:21:54 +02:00
Michael Kuhn
1ac576923f libfabric: Add 1.7.1 (#11141) 2019-04-09 18:38:15 -05:00
Matthias Diener
687a7db73f wget: add version 1.20.3 (#11148) 2019-04-09 18:37:04 -05:00
Denis Davydov
1f1ea2c859 intel: consolidate libs() in the base class (#11143) 
* intel: consolidate libs() in the base class

* white space

* flake8
 2019-04-09 13:54:21 -07:00
Denis Davydov
82455a30d0 openmpi: add 4.0.1 (#11126) 
* openmpi: add 4.0.1

* openmpi: enable-mpi1-compatibility for 4.0.1 and above

* remove preferred

* make 3.1.3 preferred
 2019-04-09 21:41:14 +02:00
Satish Balay
a9bf3bdd6a
xsdk@develop: enable hypre shared (even on OSX) and superlu-dist variant (#11131) 2019-04-09 08:42:44 -05:00
Owen Solberg
c6a7d0db03 cdhit - add new release 4.8.1 checksum (#11130) 2019-04-09 10:33:07 +02:00
Satish Balay
6e78730a97 mumps: add version 5.1.2 (#11132) 
Add patch for gfortran-8 runtime errors
 2019-04-09 10:28:41 +02:00
Patrick Gartung
aac3799d2c
Unset SPACK_INCLUDE_DIRS so the compiler wrapper does not prepend any -I flags. The assumption is that cmake will set the correct include flags. (#11129) 2019-04-08 14:30:22 -05:00
Michael Kuhn
db98f16382 zfp: Add 0.5.4 (#11016) 2019-04-08 09:11:28 +02:00
thelfer
3b5d7bfa99 Add new TFEL' versions (3.0.4, 3.1.4 and 3.2.1). Add new MGIS version (1.0.1). (#11109) 2019-04-08 09:09:14 +02:00
Cameron Smith
0e04410044 kokkos: update cuda conflict (#11110) 
see https://github.com/spack/spack/pull/10943#issuecomment-475303870
 2019-04-08 08:58:35 +02:00
Levi Baber
6e4b234d13 sra-toolkit new version (#11111) 2019-04-08 08:56:49 +02:00
Satish Balay
d11b1b18f0
netlib-scalapack: fix compatibility with mpi2 i.e openmpi-4 (#11124) 2019-04-07 10:01:54 -05:00
Abhinav Bhatele
ed66ccb6f2 ecp-proxy-apps: update version (#11119) 2019-04-06 15:33:29 -07:00
Satish Balay
90c7c74334
hypre: disable variant superlu-dist default (#11097) 2019-04-05 21:11:36 -05:00
Gregory Lee
af3e91926a fixes py-basemap package (#11104) 
* fixes py-basemap package
* remove basemap mpl_toolkit __init__.py
 2019-04-05 11:27:23 -07:00
Patrick Gartung
f1f582714c
Set Geant4 cmake module path environment variable in dependents. (#11112) 2019-04-04 13:09:13 -05:00