Commit graph

35923 commits

Author SHA1 Message Date
dependabot[bot]
b471d62dbd
build(deps): bump black from 24.4.0 to 24.4.2 in /lib/spack/docs (#43878)
Bumps [black](https://github.com/psf/black) from 24.4.0 to 24.4.2.
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](https://github.com/psf/black/compare/24.4.0...24.4.2)

---
updated-dependencies:
- dependency-name: black
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-06 09:55:43 +02:00
Massimiliano Culpo
a5f62889ca
archspec: add v0.2.4 (#44022) 2024-05-06 09:51:01 +02:00
Alec Scott
2a942d98e3
pkgconf: add v2.2.0 (#44008) 2024-05-06 09:31:41 +02:00
Alec Scott
4a4077d4ef
rust: add v1.78.0 (#44012) 2024-05-06 09:30:34 +02:00
Alec Scott
c0fcccc232
go: add v1.22.2 (#44013) 2024-05-06 09:30:13 +02:00
Alec Scott
0b2cbfefce
ncurses: add v6.5 (#44015) 2024-05-06 09:30:00 +02:00
Massimiliano Culpo
c499514322
libgpg-error: add v1.49 (#44023) 2024-05-06 09:28:31 +02:00
Alec Scott
ae392b5935
pcre2: add v10.43 (#44020) 2024-05-06 09:25:11 +02:00
Alec Scott
62e9bb5d51
libunistring: add v1.2 (#44018) 2024-05-06 09:24:12 +02:00
Alec Scott
6cd948184e
libidn2: add v2.3.7 (#44017) 2024-05-06 09:23:50 +02:00
Alec Scott
44ff24f558
openssl: v3.3.0 (#44019) 2024-05-06 09:22:15 +02:00
Alec Scott
c657dfb768
gettext: v0.22.5 (#44014) 2024-05-05 06:57:42 -06:00
Pranav Sivaraman
f2e410d95a
lazygit: add v0.41.0 (#43903) 2024-05-04 17:18:30 -06:00
dependabot[bot]
df443a38d6
build(deps): bump actions/checkout from 4.1.2 to 4.1.4 (#43831)
Bumps [actions/checkout](https://github.com/actions/checkout) from 4.1.2 to 4.1.4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](9bb56186c3...0ad4b8fada)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-04 15:49:26 -07:00
dependabot[bot]
74fe498cb8
build(deps): bump mypy from 1.9.0 to 1.10.0 in /lib/spack/docs (#43834)
Bumps [mypy](https://github.com/python/mypy) from 1.9.0 to 1.10.0.
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](https://github.com/python/mypy/compare/1.9.0...v1.10.0)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-04 15:48:49 -07:00
Carlos Bederián
5f13a48bf2
mesa: add 23.3.6 (#43736) 2024-05-04 15:46:39 -07:00
Jon Rood
c4824f7fd2
ccls: add new versions (#43923) 2024-05-04 15:42:07 -07:00
dependabot[bot]
49a8634584
build(deps): bump codecov/codecov-action from 4.3.0 to 4.3.1 (#43945)
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 4.3.0 to 4.3.1.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)
- [Commits](84508663e9...5ecb98a3c6)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-04 15:39:42 -07:00
Seth Bromberger
eac5ea869f
tmux: add v3.4 and missing yacc build dep (#43975) 2024-05-04 22:33:19 +02:00
Juan Miguel Carceller
f5946c4621
pythia8: Add a gzip variant and filter some compiler wrapper paths (#43807)
* Add a gzip variant and filter some compiler wrapper paths

* Apply suggestions from code review

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

---------

Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-04 09:33:44 -05:00
Harmen Stoppels
8564ab19c3
fix iconv from libc (#43996)
* fix iconv from libc

* fix args in glib
2024-05-04 10:30:43 +02:00
Scott Wittenburg
aae7a22d39
gitlab: release branch pipelines rebuild what changed (#43990) 2024-05-04 10:11:48 +02:00
eugeneswalker
09cea230b4
e4s-alc: add v1.0.2 (#44001) 2024-05-03 22:24:08 -06:00
wspear
a1f34ec58b
Add a gmake dependency for TAU (#43870)
We discovered a case where the system gmake can get confused by spack's build environment. Let's use a spack-provided gmake for consistent builds.
2024-05-03 20:15:40 -07:00
Auriane R
4d7cd4c0bf
Add py-flash-attn@2.4.2 (#43960) 2024-05-03 16:40:46 -07:00
Christopher Christofi
4adbfa3835
fix package permissions docs link for gaussian packages (#43998) 2024-05-03 17:35:39 -06:00
Adam J. Stewart
8a1b69c1d3
Modernize py-torch-geometric and dependencies (#43984)
* Modernize py-torch-geometric and dependencies
* Forgot one maintainer
2024-05-03 16:21:41 -07:00
Matthew Thompson
a1d69f8661
hdf package: fix building with apple-clang@15: (#43964) 2024-05-03 16:11:55 -07:00
Carlos Bederián
e05dbc529e
globalarrays package: add missing dependencies for armci=ofi/openib (#43971) 2024-05-03 16:08:29 -07:00
jdomke
99d33bf1f2
hpl: linking against fujitsu ssl2 if available (#43978)
* linking against fujitsu ssl2 if available

---------

Co-authored-by: domke <673751-domke@users.noreply.gitlab.com>
2024-05-03 16:08:12 -07:00
jdomke
bd1918cd71
adding clang compiler checks which behaves exactly like aocc (#43976)
Co-authored-by: domke <673751-domke@users.noreply.gitlab.com>
2024-05-03 16:01:14 -07:00
snehring
2a967c7df4
graphicsmagick package: add version 1.3.43 (#43977) 2024-05-03 15:59:10 -07:00
downloadico
7596aac958
New package: py-pylith (#43987) 2024-05-03 15:56:21 -07:00
Frédéric Simonis
c73ded8ed6
preCICE: increase baseline versions for next ver (#43985) 2024-05-03 15:55:46 -07:00
Satish Balay
df1d783035
sowing: add @master (#43991) 2024-05-03 15:37:39 -07:00
Massimiliano Culpo
47051c3690
Add a default provider for armci (#43997) 2024-05-03 23:48:58 +02:00
Owen Solberg
3fd83c637d
Add checksum for R v4.4.0 (#43973)
Co-authored-by: Owen Solberg <owen.solberg@sana.com>
2024-05-03 14:47:53 -07:00
Jon Rood
ef5afb66da
openfast: updates to package (#43994) 2024-05-03 15:22:12 -06:00
snehring
ecc4336bf9
r-asreml: adding new package (#43970)
Signed-off-by: Shane Nehring <snehring@iastate.edu>
2024-05-03 12:20:58 -07:00
Harmen Stoppels
d2ed217796
concretizer args: --fresh-roots == --reuse-deps (#43988)
Since reuse is the default now, `--reuse-deps` can be confusing, as it
technically does not imply roots are fresh.

So add `--fresh-roots`, which is also easier to discover when running
`spack concretize --fre<tab>`
2024-05-03 12:12:36 -07:00
Dom Heinzeller
272c7c069a
Add -fPIC to hdf-eos2 builds (#43794)
* Add -fPIC to hdf-eos2 builds
* Use self.compiler.cc_pic_flag instead of -fPIC
* Fix style in var/spack/repos/builtin/packages/hdf-eos2/package.py
2024-05-03 11:38:33 -07:00
Jeff Hammond
23f16041cd
NWChem ARMCI-MPI variant and optional TCE builds (#43883)
* WIP NWChem with ARMCI-MPI and TCE optional
* rename armci-mpi to armcimpi
* add version for git
* add ARMCI-MPI support to NWChem package
   EXTERNAL_ARMCI_PATH needs to be set to the ARMCI-MPI package install prefix.
   I could not get it from spec["armcimpi"] but it worked to use the dependent build environment method to export a    generic environmental variable to use instead.
* i suppose i can maintain NWChem as well
* check rejects option that dozens of packages use
   i do not have time to fight with this nonsense
   Run . share/spack/setup-env.sh
   ==> Error: armcimpi version 'master' has extra arguments: 'branch'
   Valid arguments for a url fetcher are:
       'url', 'sha256', 'md5', 'sha1', 'sha224', 'sha384', 'sha512', and 'checksum'
   Error: Process completed with exit code 1.
* style
* ARMCI-MPI needs depends_on; the rest seems fixed
* fix ARMCI selection per review feedback from @zzzoom
   https://github.com/spack/spack/pull/43883#discussion_r1585014147
* address reviewer feedback from @yizeyi18
   https://github.com/spack/spack/pull/43883#discussion_r1587228084
   elaborate on what +extratce does, in terms of the NWChem build environment variables,
   some of which are documented on https://nwchemgit.github.io/TCE.html.
* style
* Update var/spack/repos/builtin/packages/nwchem/package.py

---------

Signed-off-by: Jeff Hammond <jeff.science@gmail.com>
Co-authored-by: Carlos Bederián <4043375+zzzoom@users.noreply.github.com>
2024-05-03 11:13:54 -07:00
Frank Willmore
e2329adac0
Update package.py for vacuumms 1.2.0 (#43948)
* updating vacuumms for new release
* formatting
* re-order versions and remove triple quote
2024-05-03 11:06:15 -07:00
jalcaraz
4ec788ca12
[TAU package] Update with +rocprofv2. Updated some tests. (#43937)
* [TAU package] Update with +rocprofv2. Updated some tests.

pdated with +rocprofv2 flag. Only works with rocm-core >= 6.0.0

Can be tested with (Omnia):
spack install tau@master +rocm+rocprofv2 %gcc@11
Needs the last commit in our local repository, can be done by modifying the "git = " line, or waiting until the public one is updated.


In the case that tests cause issues when building TAU, there is the flag:
disable_tests = False

The rocm test is disabled by default, as the PR regarding tests loading dependencies is not solved (PR#43682).

* [@spackbot] updating style on behalf of jordialcaraz

---------

Co-authored-by: jordialcaraz <jordialcaraz@users.noreply.github.com>
2024-05-03 08:33:13 -07:00
Andrew W Elble
c1cea9d304
py-tensorflow: fix aarch64 build (#43852)
* py-tensorflow: fix aarch64 build

* [@spackbot] updating style on behalf of aweits

* patch format

* change patch strategy, actually get the logic correct in
the patch

* only patch 2.16.1 onwards for aarch64

* __CUDACC__ not __NVCC__

* !(defined(__NVCC__) && defined(__CUDACC__))

---------

Co-authored-by: aweits <aweits@users.noreply.github.com>
2024-05-03 15:46:13 +02:00
Massimiliano Culpo
5c96e67bb1
Make runtimes depend on libc only on linux (#43981) 2024-05-03 15:40:02 +02:00
Marc T. Henry de Frahan
7008bb6335
Add rosco package (#43822)
* Add rosco package

* format

* remove unused

* Add in other versions

* start adding some patches

* finish adding the patches
2024-05-03 01:58:35 -06:00
Adam J. Stewart
14561fafff
py-torch: set TORCH_CUDA_ARCH_LIST globally for dependents (#43962) 2024-05-03 09:11:59 +02:00
Massimiliano Culpo
89bf1edb6e
Spec.satisfies: fix a bug with concrete spec from JSON (#43968)
Fix a bug triggered by missing a virtual on some transitive edge, in a subdag of a pure build dependency.
2024-05-02 22:16:02 -04:00
Todd Gamblin
cc85dc05b7
docs: re-enable google analytics (#43974)
We recently switched to using the new ReadTheDocs with "addons". That includes its own
analytics, which is nice, but we also want to continue using our GA4 analytics.

Adding GA4 is no longer supported by RTD, so we have to add it manually.

- [x] re-add the gtag to all pages, manually

Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-05-02 21:56:19 -04:00