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Author SHA1 Message Date
Todd Gamblin
0724eba935 Merge pull request #1402 from glennpj/r-plotrix 
New package - r-plotrix
 2016-07-31 22:14:25 -07:00
Todd Gamblin
441bb83682 Merge pull request #1401 from glennpj/r-gdata 
New package - r-gdata
 2016-07-31 22:13:50 -07:00
Todd Gamblin
2cffc90284 Merge pull request #1400 from glennpj/r-roxygen2 
New package - r-roxygen2
 2016-07-31 22:13:16 -07:00
Todd Gamblin
68cedd2599 Merge pull request #1399 from glennpj/r-testthat 
New package - r-testthat
 2016-07-31 22:12:06 -07:00
Todd Gamblin
d00fd06095 Merge pull request #1398 from glennpj/r-xml 
New package - r-xml
 2016-07-31 22:11:38 -07:00
Todd Gamblin
3d571ad934 Merge pull request #1397 from glennpj/r-datatable 
New package - r-datatable
 2016-07-31 22:11:32 -07:00
Glenn Johnson
8815f0a0b5 New package - r-ncdf4 
Interface to Unidata netCDF (version 4 or earlier) format data files.
 2016-07-31 17:12:29 -05:00
Glenn Johnson
bfd03db12a New package - r-np 
Nonparametric kernel smoothing methods for mixed data types.
 2016-07-31 16:18:55 -05:00
Glenn Johnson
f14eb07dc1 New package - r-survey 
Analysis of complex survey samples.
 2016-07-31 15:50:19 -05:00
Glenn Johnson
a9cc6a7d08 New package - r-tarifx 
A collection of various utility and convenience functions.
 2016-07-31 15:39:09 -05:00
Glenn Johnson
be2f2e42db New package - r-e1071 
Misc functions of the Department of Statistics, Probability Theory Group
(Formerly: E1071), TU Wien.
 2016-07-31 15:26:13 -05:00
Glenn Johnson
05e5276aec New package - r-plotrix 
Various plotting functions.
 2016-07-31 15:15:55 -05:00
Glenn Johnson
dbf799bbf9 New package - r-gdata 
Data manipulation tools.
 2016-07-31 15:07:40 -05:00
Glenn Johnson
f39e570f36 New package - r-roxygen2 
In-source documentation for R.
 2016-07-31 14:52:16 -05:00
Glenn Johnson
58a6039c0a New package - r-testthat 
A unit testing system for R.
 2016-07-31 14:40:46 -05:00
Glenn Johnson
0662b953f0 New package - r-xml 
Tools for parsing and generating XML within R and S-Plus.
 2016-07-31 14:25:17 -05:00
Glenn Johnson
1b04b8be01 New package - r-datatable 
Extension of Data.frame
 2016-07-31 14:11:04 -05:00
Todd Gamblin
500218df80 Merge pull request #1384 from epfl-scitas/qa/drop_flake8_python26 
qa : no flake8 on python 2.6, coveralls only on python 2.7
 2016-07-30 20:25:14 -07:00
Todd Gamblin
173a16b38a Merge pull request #1396 from glennpj/r-quantmod 
New package - r-quantmod
 2016-07-30 20:15:53 -07:00
Todd Gamblin
68ba5377c1 Merge pull request #1395 from glennpj/r-ggmap 
New package - r-ggmap and dependencies
 2016-07-30 20:14:57 -07:00
Todd Gamblin
253507c0c3 Merge pull request #1394 from glennpj/r-maps 
New package - r-maps
 2016-07-30 20:14:27 -07:00
Todd Gamblin
7684652ce3 Merge pull request #1393 from glennpj/r-maptools 
New package - r-maptools
 2016-07-30 20:14:19 -07:00
Todd Gamblin
b12dc34ba7 Merge pull request #1391 from glennpj/r-caret 
New package - r-caret
 2016-07-30 20:14:09 -07:00
Todd Gamblin
9c31ee8a75 Merge pull request #1390 from glennpj/r-glmnet 
New package - r-glmnet
 2016-07-30 20:13:50 -07:00
Todd Gamblin
ae5ba2b110 Merge pull request #1389 from glennpj/r-vcd 
New package - r-vcd
 2016-07-30 20:13:05 -07:00
Todd Gamblin
13499f1655 Merge pull request #1388 from glennpj/r-multcomp 
New package - r-multcomp
 2016-07-30 20:12:51 -07:00
Todd Gamblin
49e9f365d8 Merge pull request #1387 from glennpj/r-randomforest 
New package r-randomforest
 2016-07-30 20:12:21 -07:00
Todd Gamblin
0fa8a491d3 Merge pull request #1386 from glennpj/r-car 
New package r-car
 2016-07-30 20:12:02 -07:00
Glenn Johnson
41cd861861 New package - r-quantmod 
Qualitative Financial modelling framework.
 2016-07-30 18:25:43 -05:00
Glenn Johnson
2913aa8d09 New package - r-ggmap and dependencies 
Spatial visualization with ggplot2
 2016-07-30 18:14:02 -05:00
Glenn Johnson
1bd2def41e New package - r-maps 
Draw geographical maps.
 2016-07-30 17:34:07 -05:00
Glenn Johnson
386f0e577a New package - r-maptools 
Tools for reading and handling spatial objects.
 2016-07-30 17:26:31 -05:00
Glenn Johnson
7207ce2a18 New package - r-caret 
Classification and Regression Training
 2016-07-30 16:53:54 -05:00
Glenn Johnson
20e52e5052 New package - r-glmnet 
Lasso and Elastic-Net Regularized Generalized Linear Models
 2016-07-30 16:38:00 -05:00
Glenn Johnson
e9944150a5 New package - r-vcd 
Visualizing Categorical Data
 2016-07-30 16:28:43 -05:00
Glenn Johnson
fc1804974c New package - r-multcomp 
Simultaneous Inference in General Parametric Models.
 2016-07-30 16:09:57 -05:00
Glenn Johnson
12167e8f37 New package r-randomforest 
Breiman and Cutler's Random Forests for Classification and Regression.
 2016-07-30 15:39:28 -05:00
Glenn Johnson
8dc26bbcd9 Have R extensions build in parallel. 
Set `MAKEFLAGS` so R extensions can be built in parallel if that is set
in spack.
 2016-07-30 15:20:14 -05:00
Glenn Johnson
ee7acc6b13 New package r-car 
Companion to Applied Regression.
 2016-07-30 15:10:25 -05:00
alalazo
f4422dc165 qa : fixes #1370 (no flake8 on python 2.6, coveralls only python 2.7) 2016-07-30 18:49:23 +02:00
Matt Belhorn
dc7e0899a0 Invokes subshell without user init scripts. 2016-07-30 11:38:34 -04:00
Matt Belhorn
5bb2d3baa0 Replaces technique for obtaining default back_end target. 
New technique parses output of `module list` in clean login environment
in order to let convoluted initialization scripts to work for us rather
than against us as when trying to parse them directly.
 2016-07-29 15:06:56 -04:00
Matt Belhorn
5e97eb5ec4 Obtains default modules from a clean subshell. 
The list of default environment modules is obtained by calling

`module list -lt`

from a subshell with a wiped environment. This allows `/etc/profile` and other
init scripts to be fully sourced which should generally include loading the
default modules.

The list of default modules is then parsed for the first acceptable CPU target,
assumed to be the back_end target.
 2016-07-29 15:02:25 -04:00
Kelly (KT) Thompson
6c80b15220 GTK+3: Provide updates to package dependencies. 
WIP: I started trying to build gtkplus@3.20, but this package has many more
dependencies than v2 and it requires newer versions of existing packages. This
commit provides updates for 5 packages that are required by GTK+3. This is not
the complete set of changes required for GTK+3.

atk  - move default version from 2.14 -> 2.20.
glib - move default version from 2.42 -> 2.49
     - v2.49 requires pcre+utf as a new dependency.
pcre - if variant +utf is selected, add '--enable-unicode-properties' to the
       configure options.
libepoxy - new package to spack
         - manages OpenGL function pointers.
pango    - move default version from 1.36 -> 1.40
 2016-07-29 09:05:44 -06:00
Denis Davydov
aad5a4c4b3 mkl: flake8 fixes; minor docu update 2016-07-29 14:12:07 +02:00
Paul Hopkins
5eebb2defa Use space characters to separate preferred variants from package name and each other 2016-07-29 13:02:47 +01:00
Denis Davydov
b6ce0e6f0e trilinos: make sure hdf5 is picked up from Spack 2016-07-29 13:11:12 +02:00
Denis Davydov
943896e237 trilinos: fix lapack lib dir 2016-07-29 13:09:34 +02:00
Denis Davydov
8ee4df8101 hypre: minor cleanup related to blas/lapack 2016-07-29 11:37:19 +02:00
Denis Davydov
572f1cd427 mkl: symlink libs to prefix.lib 2016-07-29 11:36:37 +02:00