G-Ragghianti
b86e620743
Fixing problems caused by a comfused spack concretizer ( #17797 )
2020-07-30 22:01:48 -05:00
Harmen Stoppels
6fb8946dd5
Add variants to squashfs for different compression algorithms ( #17755 )
2020-07-30 22:01:13 -05:00
Lucas Frérot
cfbcf719db
New package: py-uvw ( #17719 )
...
* py-uvw: added package for versions 0.0.7 and 0.3.1
* py-uvw: added py-setuptools as dependency
2020-07-30 21:52:17 -05:00
Dr Owain Kenway
8b515f3ba0
flang: make sure to find libstdc++ if needed ( #17480 )
2020-07-30 14:55:16 +02:00
Adam J. Stewart
d512537417
Python: added v3.8.4, v3.8.5, v3.7.7, v3.7.8, v3.6.11 ( #17775 )
...
Also added older version in the 3.6 and 3.5 series
2020-07-30 14:49:01 +02:00
G-Ragghianti
2f5e4e1664
MAGMA isn't compatible with CUDA 11 ( #17753 )
...
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-07-30 11:24:21 +02:00
G-Ragghianti
7b051df83f
slate package: resolve issues with cuda version and fortran compiler name ( #17759 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-07-30 11:21:49 +02:00
darmac
b96448269a
couchdb: new package at v3.1.0 ( #17595 )
2020-07-30 11:17:19 +02:00
Wouter Deconinck
b24a9a383a
lhapdf5: new package at v5.9.1 ( #17746 )
...
During configure lhapdf5 searches for python. On one system
I tested on (ubuntu 19.10) it finds a system installed python3
and fails to create the python extension.
Variant named to make explicit that this is only a python2 extension.
2020-07-30 11:11:17 +02:00
Rémi Lacroix
cd1647af66
latte: added v1.2.2 and master ( #17714 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-07-30 10:19:59 +02:00
darmac
d5fc3f267c
zipkin: new package at v2.21.5 ( #17780 )
2020-07-30 10:03:52 +02:00
Glenn Johnson
f0ce129c43
New package: r-hh ( #17667 )
...
* New package: r-hh
* Add short description
Add the project one liner for a short description that will be used for
`module whatis`.
2020-07-29 22:25:01 -05:00
ilbiondo
d61f362211
Updated iq-tree package ( #17690 )
2020-07-29 22:20:44 -05:00
Robert Mijakovic
8ea597c79a
Intel packages: new versions ( #17692 )
...
* update version: intel packages daal, ipp, mkl-dnn, mkl, mpi, parallel-studio, pin, tbb and makes url parameter consistent and always use single quote.
* Fixes a typo with one of the sha256 checksum..
* Adds version entries for new versions of Intel packages.
* Adds hashes for new versions of Intel packages.
* Adds missing hash of Intel compiler.
* Adds the newest version of Intel MPI 2019.8.
* Fixes hash for intel-parallel-studio and intel-tbb.
* Fixes version number of Intel MPI.
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2020-07-29 22:18:32 -05:00
Rémi Lacroix
e7fbd6c53e
CMake: Fix compilation with Intel compilers on some systems. ( #17693 )
...
Systems with older GNU compilers were not affected.
This commit fixes #15901 and fixes #17605 .
2020-07-29 22:17:32 -05:00
Tiziano Müller
8e49cac433
pgi: update to 20.4 ( #17696 )
2020-07-29 22:16:30 -05:00
Shayna Kapadia
867e64cb4f
libmodbus: new package ( #17778 )
...
* libmodbus:adding new package
* fixing testing failures
* fixing flake 8 errors
* fixing flake 8 errors
Co-authored-by: Kapadia <kapadia2@llnl.gov>
2020-07-29 22:13:58 -05:00
Rao Garimella
3a8815ea7a
update version to 1.1.5 ( #17701 )
...
Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2020-07-29 22:12:10 -05:00
Toyohisa Kameyama
d14baf4532
use libquadmath only x86_4 and ppcle. ( #17728 )
2020-07-29 21:47:18 -05:00
Mark Olesen
badd11e71c
openfoam package updates, scotch version update ( #17731 )
...
* openfoam: use MPI 'headers' property (fixes #17730 )
* openfoam: +spdp variant, usable for OpenFOAM 1906 and later
in contrast to +float32, which uses single-precision throughout, +spdp
uses the following:
- single-precision for most internals
- double-precision for linear solver
* openfoam: add m4 as build dependency
* scotch: update to 6.0.9 released Oct 2019
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-07-29 21:45:40 -05:00
Valentin Clement (バレンタイン クレメン)
42dec9eb12
CLAW: Add version 2.0.2 ( #17733 )
2020-07-29 21:43:14 -05:00
Wouter Deconinck
6b3f9c5d60
New package: vgm ( #17741 )
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* [vgm] new package Virtual Geometry Model (VGM)
* [vgm] Updated description
2020-07-29 21:04:37 -05:00
Wouter Deconinck
ba5aa67303
New package: geant4-vmc ( #17745 )
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* [geant4-vmc] New package
* [geant4-vmc] aligned spacing
2020-07-29 20:44:16 -05:00
David Böhme
21ca7abf8d
Add Caliper v2.4.0 ( #17750 )
...
* Add Caliper v2.4.0
* Use built-in gotcha
2020-07-29 20:41:41 -05:00
Julien Loiseau
efb456cb0a
Adding pic support for Kokkos ( #17751 )
...
* Adding pic support for Kokkos
* Update pic for kokkos
2020-07-29 20:40:12 -05:00
h-denpo
4e12dc3303
elang add depends_on('ncurses', type='link') ( #17761 )
2020-07-29 20:30:04 -05:00
Mark W. Krentel
896e83e3e6
libunwind: add +pic variant ( #17762 )
...
Libunwind already builds a shared library. The +pic variant adds the
compiler pic flag to the static archive so that it can be linked into
another shared library.
2020-07-29 20:29:24 -05:00
ketsubouchi
8435016a43
eagle: fix CC=gcc and delete march=native ( #17763 )
2020-07-29 20:28:31 -05:00
Justin S
416a929f7f
spades: add 3.14.1 ( #17776 )
2020-07-29 20:03:58 -05:00
Robert Pavel
af778aac0a
Tweak to EOSPAC for gcc@10 Support ( #17777 )
...
Eospac's build breaks on gcc@10: due to dependence on -fcommon behavior
and gnu changing to -fno-common. Added conditional argument to support
bleeding edge compilers
2020-07-29 20:03:12 -05:00
tilne
5a5f2c00a8
update URL and sha256 for aws-parallelcluster 2.8.0 ( #17685 )
...
Signed-off-by: Tim Lane <tilne@amazon.com>
2020-07-29 19:35:43 -05:00
Jen Herting
5243f97c3b
[bowtie2] added version 2.4.1 ( #17748 )
2020-07-29 15:15:33 -07:00
Rémi Lacroix
5a42883528
Boost: Update conflicts for version 1.73.0. ( #17774 )
...
Variant "+mpi+python cxxstd=98" is fixed in 1.73.0.
2020-07-29 12:08:20 -07:00
ketsubouchi
1827db2859
express: add cast for %fj ( #17764 )
2020-07-29 11:53:39 -07:00
Toyohisa Kameyama
5b12c0f4a0
clamcv: Add curl dependency. ( #17765 )
2020-07-29 11:48:07 -07:00
darmac
a0e6145884
Add new package: solr ( #17597 )
...
* Add new package: solr
* refine version order
2020-07-29 11:38:44 -07:00
Massimiliano Culpo
e47e972cf2
zlib: style changes to check if set of changed files is computed correctly
2020-07-29 11:23:34 -07:00
Matthias Wolf
90648bb477
qt: fix build with ~ssl. ( #17767 )
...
OpenSSL was pulled from the spec too early, leading to failures when
attempting to build with ~ssl.
2020-07-29 10:53:01 -07:00
Andrew W Elble
d1494fe8da
perl: add missing berkeley-db dependency ( #17771 )
2020-07-29 10:46:24 -07:00
Massimiliano Culpo
cad21d6eb1
lmod: change variant defaults to match Lmod's defaults ( #17770 )
2020-07-29 10:35:46 -07:00
mic84
a212bb0577
Amrvis: update branch name ( #17718 )
2020-07-28 09:12:00 -07:00
Patrick Gartung
7c61d6d45f
Update darshan package with mpi variant ( #17717 )
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* Update darshan package with nompi variant.
* Change variant to mpi and default to True
2020-07-27 16:30:29 -05:00
Glenn Johnson
ff529e6dc1
r-adespatial: added new package ( #17700 )
...
This PR adds the r-adesaptial package and several other new packages as
dependencies.
- r-adegraphics
- r-adephylo
- r-phylobase
- r-rncl
- r-rnexml
2020-07-27 22:08:48 +02:00
Glenn Johnson
1c0abaa6eb
r-dss: added new package at v2.36.0 with dependencies ( #17661 )
...
This PR adds the r-dss package and the r-bsseq package, also new, as a
dependency. This includes the latest versions, which required updates to
the following dependencies:
- r-biocgenerics
- r-iranges
- r-s4vectors
- r-summarizedexperiment
Older versions of r-dss and r-bsseq are included as well to ensure
compatibility with older versions of the above dependencies.
2020-07-27 20:51:27 +02:00
Seth R. Johnson
6c2749536e
qt: fixed build with apple-clang ( #17706 )
2020-07-27 18:32:29 +02:00
Adam J. Stewart
4e4b8d8249
SciPy: added v1.5.2 ( #17708 )
2020-07-27 18:26:30 +02:00
ketsubouchi
032a52e006
scons: added support to Fujitsu compilers ( #17710 )
2020-07-27 18:23:53 +02:00
Hadrien G
e3cc7fc38c
acts: added v0.29 ( #17712 )
2020-07-27 18:13:56 +02:00
Amjad Kotobi
f2e66730d0
openmpi: added lustre variant to openmpi ( #17478 )
2020-07-27 18:11:57 +02:00
Claire Guilbaud
0ebdfb3c37
sphinxcontrib-mermaid: new package at v0.4.0 ( #17630 )
2020-07-27 17:30:22 +02:00
Claire Guilbaud
fdb21e3e91
json logger: new package at v0.1.11 ( #17628 )
2020-07-27 16:32:56 +02:00
Claire Guilbaud
d66d430ab5
pygments pytest: new package at v1.2.0 ( #17626 )
2020-07-27 15:44:26 +02:00
Claire Guilbaud
bbfc9fd448
commonmark: new package at v0.9.0 ( #17624 )
2020-07-27 15:02:56 +02:00
Claire Guilbaud
e960e016af
hieroglyph: new package at v1.0.0 ( #17625 )
2020-07-27 14:34:40 +02:00
Claire Guilbaud
074c0d622f
python docs theme: new package at v2020.1 ( #17627 )
2020-07-27 12:53:04 +02:00
Claire Guilbaud
458a9f22da
yolk3k: new package at v0.9 ( #17635 )
2020-07-27 12:48:58 +02:00
Claire Guilbaud
38730c6e68
sphinxcontrib trio: new package at v1.1.2 ( #17631 )
2020-07-27 12:14:12 +02:00
Claire Guilbaud
21a4edb1f3
sphinx gallery: new package at v0.7.0 ( #17633 )
2020-07-27 11:21:48 +02:00
Hadrien G
907f9e8411
[root] Add version 6.22 ( #17459 )
...
* Add ROOT v6.22
* Hello xext my old friend...
2020-07-26 10:08:53 -05:00
Patrick Gartung
66d59a90ed
Rename sas static-analysis-package ( #17695 )
2020-07-24 17:07:01 -07:00
Nicholas Sly
5795f1d7da
Add Totalview package ( #17643 )
...
* Add initial totalview package.
* Add maintainer and helpful comments/information.
Co-authored-by: sly <sly@lanl.gov>
2020-07-24 16:01:32 -07:00
t-nojiri
de6dfe3707
brltty (package): Add dependency on alsa-lib ( #17616 )
2020-07-24 15:56:34 -07:00
Jen Herting
148acfefcc
py-gensim (package): add version 3.8.3; update dependency constraints ( #17641 )
2020-07-24 15:47:19 -07:00
Matthieu Dorier
b04f9e6774
MPICH (package): add optional support for argobots ( #17678 )
2020-07-24 15:42:00 -07:00
Christian Tacke
0e090064c4
singularity: Add version 3.6.1
2020-07-24 15:35:40 -07:00
vvolkl
be06803804
WHIZARD (package): add LCIO dependency, Openloops support ( #17658 )
...
* WHIZARD: add versions 2.8.4 and 2.8.3
* New package: LCIO
* WHIZARD: add optional dependency on LCIO
* WHIZARD: add optional dependency on Openloops
* WHIZARD: allow building with either hepmc or hepmc3 dependencies
* Openloops: set process_lib_dir in configure
* Openloops: fix reference to variant
2020-07-24 15:25:57 -07:00
Andrew W Elble
99c46e8186
py-astropy: force re-cythonization of distributed .pyx files ( #17567 )
...
astropy 3.2.1 fails to build with python 3.8.3 with
errors similar to this:
astropy/stats/_stats.c:318:11: error: too many arguments to function 'PyCode_New'
PyCode_New(a, 0, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
These are files that are generated by cython, but are included in the
tarball. Since there's apparently been an API change to PyCode_New, they will
need to be re-cythonized to compile correctly.
2020-07-24 17:46:56 +02:00
Andrew W Elble
30d0347825
py-astropy-healpix: new package ( #17568 )
2020-07-24 17:39:45 +02:00
jdomke
ea50e4036e
scorep: add libunwind dependency ( #17580 )
2020-07-24 17:30:50 +02:00
Harmen Stoppels
54bce00d4d
Ensure that the stubs directory does not end up in the rpath ( #17619 )
2020-07-24 17:02:58 +02:00
Jon Rood
d3e4b14997
imagemagick: added dependency on libsm ( #17577 )
2020-07-24 17:00:25 +02:00
rempke
6bad79fca0
netlib-scalapack: fixed compilation with gcc 10 ( #17647 )
2020-07-24 16:53:32 +02:00
t-nojiri
13b3578d2f
camx: change compile option for aarch64 ( #17653 )
2020-07-24 16:39:40 +02:00
Adam J. Stewart
08b5b56566
Qhull: add v2019.1 and v2020.1 ( #17648 )
...
* Qhull: add v2019.1 and v2020.1
* Fix compilation with Apple Clang
2020-07-24 16:16:53 +02:00
Adam J. Stewart
c1a2d66804
py-matplotlib: fix freetype and qhull dependencies ( #17649 )
2020-07-24 16:15:50 +02:00
Mark Olesen
c95c183bc4
openfoam: install META-INFO directory ( #17673 )
...
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-07-24 15:32:18 +02:00
Michael Kuhn
ed4b770e1a
gcc: added v10.2.0 ( #17681 )
2020-07-24 15:24:12 +02:00
Federico Ficarelli
b8c3e3e16f
hipsycl: switch to renamed default branch ( #17689 )
2020-07-24 15:19:59 +02:00
Rémi Lacroix
d9c1b62d38
CMake: added v3.18.0. ( #17688 )
2020-07-24 15:02:08 +02:00
ilbiondo
1aa1ddcd78
Updated elmer-fem recipe ( #17687 )
2020-07-24 09:47:09 +02:00
Adam J. Stewart
5fed42eae8
NumPy: add v1.19.1
2020-07-23 17:56:48 -07:00
ketsubouchi
1bbf8c0635
libgd (package): update configure to find jpeg dependency ( #17655 )
2020-07-23 17:55:34 -07:00
ketsubouchi
1fe07891e3
cctools (package): remove fstack-protector-all for Fujitsu compiler ( #17656 )
...
The Fujitsu C compiler does not support the "fstack-protector-all" option.
2020-07-23 17:49:37 -07:00
Tamara Dahlgren
a88675ffa9
XBraid (package): Switch to Github URL ( #17670 )
2020-07-23 17:27:25 -07:00
Chuck Atkins
547c71ad78
Revert "Add libglvnd packages/Add EGL support ( #14572 )" ( #17682 )
...
This reverts commit 573489db71
2020-07-23 17:41:48 -04:00
ilbiondo
f42394daf5
csa-c: added new package at master ( #17676 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-07-23 17:07:48 +02:00
ilbiondo
10dacc2588
nn-c: added new package at v1.86.2 ( #17675 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-07-23 17:06:35 +02:00
ilbiondo
5067b956f4
Shapeit4: added new package at v4.1.3 ( #17674 )
2020-07-23 13:22:58 +02:00
Nick Robison
39cfa9630c
[M4] Add missing compiler flag on Cray Compiler ( #17604 )
...
* [M4] Add missing compiler flag on Cray Compiler
The new version of the Cray Compiler are based on Clang, which means we
need to add the same LDFLAG as other clang environments.
2020-07-22 23:55:03 -07:00
Adam J. Stewart
4b33558707
Cython: add v0.29.21 ( #17650 )
2020-07-22 18:36:55 -07:00
Jen Herting
48e8072b26
New Package: py-boto ( #17639 )
...
Added py-boto package
2020-07-22 17:52:36 -07:00
Frédéric Simonis
37fa6fe343
precice: Add version 2.1.0 ( #17644 )
2020-07-22 16:49:36 -07:00
Mark W. Krentel
4c7e52adaa
hpctoolkit: add version 2020.07.21 ( #17645 )
2020-07-22 13:53:41 -07:00
Ben Bergen
4ca6d1f0f7
Added variant to enable Legion SPY logging. ( #17637 )
2020-07-22 11:41:20 -06:00
Hadrien G
b8135bd205
[acts] Add version 0.28.0 ( #17622 )
...
Add acts v0.28.0
2020-07-22 09:14:51 -07:00
Justin S
dedadcd2ea
hisat2 (package): add version 2.2.0, update homepage ( #17600 )
2020-07-21 19:29:18 -07:00
Adam J. Stewart
983aeea850
New packages: py-azure-cli and dependencies ( #17585 )
2020-07-21 19:21:29 -07:00
Hadrien G
b81339cf80
[acts] Add 0.27.x series ( #17621 )
...
Add acts v0.27 and v0.27.1
2020-07-21 10:56:18 -07:00
Tiziano Müller
ec1237479e
cp2k: make libint optional ( #17618 )
2020-07-21 09:13:59 -07:00
t-nojiri
40e2a41477
aegean (package): remove -m64 on aarch64 ( #17615 )
2020-07-20 23:57:09 -07:00
