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2378 commits

Author SHA1 Message Date
Erik Schnetter
3194f2001b Update git to 2.9.3 2016-08-23 15:35:43 -04:00
Erik Schnetter
05f5ba4bf9 Correct flake8 errors 2016-08-23 14:57:29 -04:00
Erik Schnetter
73cae8d9c4 Implement review requests 
- use two empty lines before `class`
- change version numbering scheme for packages, use `url_for_version` to make things work
- specify dependency types
- add comment about temporarily moved download location
- update two packages to newer versions
 2016-08-23 13:52:28 -04:00
Denis Davydov
52ae0ea055 trilinos: use version.dashed 2016-08-23 18:48:17 +02:00
David Beckingsale
243d516bf0 Ensure RAJA builds out-of-source 2016-08-23 08:18:26 -07:00
Denis Davydov
6500ac80e4 nwchem: fix lapack detection 2016-08-23 16:46:40 +02:00
Erik Schnetter
a2692e4ef5 sympol: Add package 2016-08-23 10:41:08 -04:00
Erik Schnetter
bdc825fc3c cddlib: Point download url to a (more reliable) Fedora server 2016-08-23 09:59:56 -04:00
Erik Schnetter
64d3f87e60 Merge branch 'develop' into eschnett/sympol 2016-08-23 09:45:46 -04:00
Denis Davydov
7eb386e55e nwchem: add patches 2016-08-23 14:52:18 +02:00
Denis Davydov
5da9116c06 nwchem: add scalapack; extra steps for 32bit blas/lapack 2016-08-23 11:55:00 +02:00
Denis Davydov
aca8576de4 trilinos: switch to github url; fix missing py-numpy dependency 2016-08-23 10:50:08 +02:00
Todd Gamblin
e81f3daa28 Merge pull request #1519 from mathstuf/fix-deptypes 
Fix deptypes
 2016-08-22 21:40:25 -07:00
Erik Schnetter
7b49166f9b Update gcc to @6.2.0 
Also add some missing older version.
Update download location to original GNU location.
 2016-08-22 20:26:54 -04:00
Denis Davydov
a44beee172 nwchem: add new package 2016-08-23 02:22:44 +02:00
Andrew Williams
65abd279cd Renamed intelmpi as suggested 2016-08-22 13:44:21 +01:00
Andrew Williams
87d15212eb Cleaned branch to only include plumed package 2016-08-22 12:30:17 +01:00
Andrew Williams
226d4f04f3 Spelling tweaks and consistent quoting 2016-08-22 12:09:50 +01:00
Andrew Williams
5661afa315 Passed flake8 tests 2016-08-22 12:03:47 +01:00
Andrew Williams
0c8462723b Found upstream plumed package and modified this one to match 2016-08-22 11:24:03 +01:00
Erik Schnetter
78685addbb hdf5-blosc: Correct download url 2016-08-21 14:39:54 -04:00
Todd Gamblin
55b1182a4c Merge pull request #1554 from eschnett/eschnett/hdf5-blosc 
hdf5-blosc: Remove commit id from version specification
 2016-08-21 09:44:25 -07:00
Adam J. Stewart
d5903e4612 Flake8 2016-08-19 17:06:34 -05:00
Adam J. Stewart
f0f2c6c486 Add latest version of fftw 2016-08-19 17:05:14 -05:00
Gregory L. Lee
a177b9be8a updated stat 3.0.0b url 2016-08-19 13:11:21 -07:00
Adam J. Stewart
835b8f246e py-sphinx requires py-setuptools during runtime 2016-08-19 14:20:31 -05:00
Adam J. Stewart
d7873b5319 Swap lowercase for uppercase in URL 2016-08-19 14:00:50 -05:00
Adam J. Stewart
c1af0d3806 Fix binary conflicts during sphinx activation 2016-08-19 13:54:22 -05:00
Adam J. Stewart
d4e3699510 Add all Sphinx dependencies 2016-08-19 13:44:00 -05:00
Erik Schnetter
466da3afcc Remove commented-out outdated commit id 2016-08-19 11:52:40 -04:00
Andrew Williams
90e5ccd98c Cleaned up commented out code in intelmpi package 2016-08-19 15:01:46 +01:00
Andrew Williams
13f636ec68 Added required arguments to get plumed to build with intelmpi 2016-08-19 15:00:21 +01:00
Stephen Herbein
3445a781eb py-cffi: set LDSHARED env so that rpath is set 
py-cffi's .so was being built without the rpath being set.  distutils
looks at the LDSHARED for which compiler to use to build the final .so.
Since it was not set, distutils fell back to the system provided
compiler.  Setting it forces the shared library to be compiled with the
spack compiler (meaning that the rpath is set correctly).
 2016-08-18 11:32:19 -07:00
Andrew Williams
6641f42417 Not compiling due to mpi error. Also getting this error from the command line so could be separate issue. Otherwise package definition first draft complete. 2016-08-18 13:19:36 +01:00
Erik Schnetter
296212d78d hdf5-blosc: Remove commit id from version specification 
The respective commit seems to have vanished.
Now using the master branch without specifying a particular commit.
 2016-08-17 16:36:33 -04:00
Marty McFadden
f4ec99ecb4 Added +piclibs variant for building PIC versions of libgfortran.a and libstdc++.a 2016-08-17 09:28:21 -07:00
Andrew Williams
b99e945e6d Added variants and dependencies to plumed but I'm getting an error when trying to resolve mpi to a valid virtual package 2016-08-17 15:43:59 +01:00
becker33
7f57405eac Merge pull request #1531 from davydden/pkg/ape 
ape: add new package
 2016-08-16 10:52:27 -07:00
becker33
e8afbfbce7 Merge pull request #1530 from davydden/pkg/octopus 
octopus: new package
 2016-08-16 10:49:41 -07:00
Denis Davydov
5dcc0f7802 ape: add new package 2016-08-16 19:42:32 +02:00
Denis Davydov
9509c10064 octopus: new package 2016-08-16 19:38:38 +02:00
Gregory L. Lee
f182590aae added pkg-config to build deps of cairo and pixman 2016-08-15 15:17:53 -07:00
Gregory L. Lee
54ef9443d3 fix atk url_for_version 2016-08-15 13:51:54 -07:00
Gregory L. Lee
74dd7a36b5 allow parallel build of stat 2016-08-15 13:51:54 -07:00
Gregory L. Lee
749a4e78c7 gobject-introspection requires glib version 2.48.1 2016-08-15 13:51:54 -07:00
Gregory L. Lee
3df208efc0 stat and dependences package updates 2016-08-15 13:51:53 -07:00
Gregory L. Lee
69931996bf added dyninst patches for stat+dysect 2016-08-15 13:51:53 -07:00
Gregory L. Lee
f9cb21e886 flake 8 fixes for dyninst 2016-08-15 13:51:53 -07:00
Gregory L. Lee
0074ecd6fa dyninst package use spec.satisfies instead of @when 2016-08-15 13:51:52 -07:00
Gregory L. Lee
8b94937609 flake 8 fixes for stat and dependents 
flake 8 fixes for dyninst

flake 8 fixes for dyninst

flake 8 fixes for dyninst
 2016-08-15 13:50:39 -07:00
Gregory L. Lee
bd8aab00e4 updated stat and added pygtk and dependent packages 2016-08-15 13:48:58 -07:00
Andrew Williams
27793d97dc temp commit in current state 2016-08-15 16:16:00 +01:00
Ben Boeckel
9ec1c0e18e opencv: make py-numpy a nolink dependency 2016-08-15 10:47:00 -04:00
Ben Boeckel
042666eb7e go: mark git as also being a runtime dependency 2016-08-15 10:46:45 -04:00
Ben Boeckel
826732efec packages: mark builddeps as type='build' 
Less sure about these.
 2016-08-15 10:46:23 -04:00
Ben Boeckel
eb13cbe9bd r-datatable: fix nolink dependency 2016-08-15 10:46:05 -04:00
Ben Boeckel
0d17d90b29 packages: mark builddeps as type='build' 2016-08-15 10:45:19 -04:00
Andrew Williams
3edfa390f7 Basic package file for plumed and boilerplate for external intel mpi 2016-08-15 11:19:40 +01:00
Adam J. Stewart
bc64990bc6 Replace python('setup.py' with setup_py( 2016-08-12 12:16:48 -05:00
Todd Gamblin
e1c2ea5123 Merge pull request #1342 from adamjstewart/features/cgns 
Add CGNS package
 2016-08-12 09:19:07 -07:00
Adam J. Stewart
d4377c1293 Add Python 3.5 support, latest version of PySide 2016-08-12 09:59:38 -05:00
Adam J. Stewart
633e540a17 Use GitHub URL for ImageMagick 2016-08-11 14:13:33 -05:00
Adam J. Stewart
f147d64527 Rebase messed up flake8 2016-08-11 11:01:57 -05:00
Adam J. Stewart
04cee45ac9 Skip webengine until webkit support is added 2016-08-11 10:33:43 -05:00
Adam J. Stewart
2b0444b6f4 Latest version of pyside still has problems, add deps 2016-08-11 10:33:43 -05:00
Adam J. Stewart
b6fad65f52 Combine patch for all versions 
Patch doesn't work with @when unless you specify a patch for every
version. When running `spack patch` for a version without a patch,
spack thinks that a patch exists, tries to apply it, but it doesn't
exist. Spack gets very confused.
 2016-08-11 10:33:43 -05:00
Adam J. Stewart
1363b05e93 Add test dependencies 2016-08-11 10:33:43 -05:00
Adam J. Stewart
5cc76f7d84 Fix patch for py-pyside 1.2.4 2016-08-11 10:33:43 -05:00
Adam J. Stewart
59ce0c7514 Add patch to build qt 4 with GCC 6 2016-08-11 10:33:42 -05:00
Adam J. Stewart
ddf1879bed Remove glib dependency, causes problems with PCRE and JavaScript 2016-08-11 10:33:02 -05:00
Adam J. Stewart
90dd26397c Fix qt patch 2016-08-11 10:33:02 -05:00
Adam J. Stewart
7135299a66 Add latest version of pcre 2016-08-11 10:33:02 -05:00
Adam J. Stewart
ac15d5d619 Add patch for qt gamepad compilation problems 2016-08-11 10:33:01 -05:00
Adam J. Stewart
eac9a5905f Flake8 and url_for_version changes 2016-08-11 10:33:01 -05:00
Adam J. Stewart
80742b2647 Add latest version of qt 2016-08-11 10:30:31 -05:00
Adam J. Stewart
8a0824df09 Update matplotlibrc filtering for GUI backends 2016-08-11 10:28:35 -05:00
Adam J. Stewart
a388871083 Update ImageMagick to latest version 2016-08-11 10:28:35 -05:00
Adam J. Stewart
2b83ea30e7 Re-add ipython support 2016-08-11 10:28:35 -05:00
Adam J. Stewart
f56de63972 Fix cycler dependencies, update qhull version names 2016-08-11 10:28:35 -05:00
Adam J. Stewart
0b8a3ad8ad Flake8 2016-08-11 10:28:34 -05:00
Adam J. Stewart
aa6a6df640 Undo changes to GUI framework 2016-08-11 10:28:34 -05:00
Adam J. Stewart
e905ce16c9 Flake8 2016-08-11 10:28:34 -05:00
Adam J. Stewart
11e595089d Matplotlib overhaul 2016-08-11 10:28:33 -05:00
Todd Gamblin
e6a122417a Merge pull request #1491 from eschnett/eschnett/curl 
Update curl to 7.50.1
 2016-08-11 03:04:07 -07:00
Todd Gamblin
84e331c586 Remove unneeded noqa comments. 2016-08-10 16:33:39 -07:00
Todd Gamblin
240f1fd223 Spack packages now PEP8 compliant. 2016-08-10 16:33:39 -07:00
Erik Schnetter
158deae625 Update curl to 7.50.1 2016-08-10 13:51:57 -04:00
Matt Belhorn
2be065418b Openssl package should not require openssl (https) to obtain source. 2016-08-09 15:57:07 -04:00
alalazo
38dcd6bce9 qa : flake8 issues 2016-08-09 09:54:24 +02:00
alalazo
5362864cc9 plumed : fixed name clash on attribute 2016-08-09 09:24:36 +02:00
Massimiliano Culpo
15d9fb1879 plumed : adding dependents 
* cp2k : added plumed
* gromacs : patched pme load balancing
* gromacs : added plumed
 2016-08-09 09:23:53 +02:00
becker33
3ea1325620 Merge pull request #1345 from hartzell/feature/add-perl-dependency-to-git 
Add depends_on('perl'), depends_on('pcre') to git package
 2016-08-08 09:44:50 -07:00
Todd Gamblin
dd30066feb Merge pull request #1449 from hartzell/feature/add-package-for-prank 
Add package for prank and supporting tools
 2016-08-07 23:43:40 -07:00
Todd Gamblin
e65a8b6a9a Merge pull request #1463 from davydden/pkg/opium 
opium: add new package
 2016-08-07 15:56:27 -07:00
Todd Gamblin
8121ac2c27 Merge pull request #1464 from hartzell/feature/update-lmod 
No need to patch Lmod after 6.4.4
 2016-08-07 15:55:16 -07:00
Todd Gamblin
93f5a750cb Merge pull request #1465 from glennpj/pango_url 
Add list_url to pango package
 2016-08-07 15:55:04 -07:00
Todd Gamblin
281f6f18e1 Merge pull request #1466 from pramodk/develop 
PDT should download full installer package
 2016-08-07 15:54:50 -07:00
Denis Davydov
db87a9d3ce tar: fix 1.28 on macOS; add 1.29 (#1462) 2016-08-07 15:54:01 -07:00
Adam J. Stewart
d7329d7bc2 Fix erroneously stripped trailing whitespace in patch (#1467) 2016-08-07 15:53:25 -07:00
Pramod Kumbhar
e9edfec0ec PDT should download full installer package pdtoolkit-X.tar.gz (default pdt-X.tar.gz is only for x86 and cray) 2016-08-07 01:14:26 +02:00