Peter Scheibel
e97c28e5b3
package: ensure patches are applied in-order
...
This helps to ensure that patches are applied consistently and will also
be used as the source for the patch part of full package hashes.
2018-03-20 00:29:54 -07:00
Peter Scheibel
2379ed54b9
package_hash: add code to generate a hash for a package file
...
This will be included in the full hash of packages.
2018-03-20 00:29:54 -07:00
Peter Scheibel
db81d19ddd
PackageBase: add a list of metadata attributes
...
These attributes are ignored when doing a content hash of a package.
2018-03-20 00:29:54 -07:00
Peter Scheibel
39cb9d0397
fetch_strategy: add a source_id to fetches
...
This will be included in the full hash of packages.
2018-03-20 00:29:54 -07:00
Adam J. Stewart
6058cc1770
Add latest version of py-setuptools ( #7523 )
2018-03-20 07:18:20 +01:00
Adam J. Stewart
c11b46ae99
Add DSDP package ( #7526 )
2018-03-20 07:08:18 +01:00
Axel Huebl
106827db03
pocl: fix spec ( #7461 )
...
It seems there has been a change in concretization that resulted in
a request for a llvm latest (5.0.1) while not satisfying the later
more precise request for a version.
Remove the first line and only rely on the last.
2018-03-19 16:44:01 -05:00
Eric
4ea0c16f36
picard: Add version 2.18.0 ( #7528 )
2018-03-19 16:21:04 -05:00
Adam J. Stewart
869cb69985
Add latest version of SuiteSparse ( #7525 )
2018-03-19 16:19:44 -05:00
Massimiliano Culpo
c14c0d8e74
python: dbm module + version 3.6.4 ( #7520 )
...
A build of python@3.X had the following in the logs:
```
The necessary bits to build these optional modules were not found:
_dbm _gdbm _tkinter
```
As Tkinter is already a variant, we adopt the same strategy for dbm.
2018-03-19 22:19:26 +01:00
Adam J. Stewart
3874871512
Add latest version of py-six ( #7524 )
2018-03-19 16:19:19 -05:00
Adam J. Stewart
aea0b84e90
Add latest version of py-packaging ( #7522 )
2018-03-19 16:19:05 -05:00
Adam J. Stewart
a84cfb9ad4
Add latest version of GLPK ( #7521 )
2018-03-19 16:18:42 -05:00
Federico Ficarelli
72fae99a9e
modern-wheel: new package ( #7514 )
...
#Fix imports
2018-03-19 10:43:22 -05:00
Adam J. Stewart
2e9f158a79
Add latest version of libjpeg-turbo ( #7518 )
2018-03-19 10:41:37 -05:00
Adam J. Stewart
9e4bd6267f
Add latest version of libjpeg ( #7517 )
2018-03-19 10:41:17 -05:00
Adam J. Stewart
967194ce26
Add latest version of libpng ( #7516 )
2018-03-19 10:40:56 -05:00
Adam J. Stewart
bb591e675c
Add latest version of nasm ( #7515 )
2018-03-19 08:50:02 -05:00
Massimiliano Culpo
b2822b2582
glib: updated package and fixed issues with dtrace ( #7493 )
...
fixes #6965
closes #6968
2018-03-19 06:38:42 +01:00
Jimmy Tang
ba1b3fdc9d
Update the patches to work with bazel 0.9.0 ( #7013 )
...
Some code got moved around so the patches needed to be updated
2018-03-18 08:53:57 -05:00
Hans Pabst
e61b239a8a
LIBXSMM 1.9 ( #7495 )
2018-03-17 18:29:17 -05:00
jthies
e064927fab
gmp: add oldish version 5.1.3 with checksum ( #7510 )
2018-03-17 18:22:42 -05:00
Eric
5a04ad1273
py-multiqc: Add version 1.5 ( #7506 )
2018-03-17 18:22:12 -05:00
Massimiliano Culpo
49feddf71e
py-performance: added package ( #7500 )
2018-03-17 20:33:13 +01:00
Massimiliano Culpo
e1290b438b
hwloc: constrain dependency on numactl ( #7509 )
...
fixes #7505
2018-03-17 18:18:35 +01:00
Massimiliano Culpo
cf4b3f2af6
hwloc: updated package ( #7483 )
...
This includes:
* Added latest available versions (1.11.9, 2.0.0)
* Added variants to enable graphical output from lstopo
* Enabled build of the bundled netloc package if @2.0.0:
* Added dependency from numactl if @:1.11.9
* Added a constraint to avoid using hwloc@2.0.0 with openmpi
2018-03-15 10:16:33 +01:00
Robert Pavel
30b8dfbeba
Added Tagged Release of ExaMiniMD ( #7485 )
2018-03-14 18:37:21 -06:00
Michael Kuhn
423f2341bc
cube: Fix qt detection ( #7242 )
...
cube's configure only recognizes qt versions with single digit version
components and breaks with qt 5.10. Patch the configure files directly
to avoid having to regenerate them.
2018-03-14 09:01:11 +01:00
Levi Baber
1cde74656b
phylip: new version ( #7467 )
2018-03-14 08:56:15 +01:00
Sinan
e378044f16
postgresql: add newest version 10.3 ( #7455 )
2018-03-14 08:54:02 +01:00
Federico Ficarelli
b5879d7d07
Fix extends('tcl') environment ( #7473 )
2018-03-14 07:02:50 +01:00
Matthias Diener
73dd58b68a
Xterm: Fix URL ( #7476 )
2018-03-14 06:58:42 +01:00
Kelly (KT) Thompson
86f9c9fc73
Provide new package: mscgen. ( #7477 )
...
Mscgen is a small program that parses Message Sequence Chart descriptions and
produces PNG, SVG, EPS or server side image maps (ismaps) as the output.
See http://www.mcternan.me.uk/mscgen/
2018-03-14 06:56:11 +01:00
Yifan Zhu
5bd8ec8160
r-tfbstools: new package ( #7243 )
2018-03-13 12:40:41 +01:00
Stephen McDowell
6f76c2124a
llvm 6.0.0 released as stable ( #7459 )
...
Relase notes: http://releases.llvm.org/6.0.0/docs/ReleaseNotes.html
2018-03-13 11:34:19 +01:00
Cyrus Harrison
f8d3a0225f
add an option to build tbb statically ( #7407 )
2018-03-13 08:08:02 +01:00
f-sim
1329f3baca
Fix dependency conflict in FEniCS. ( #7404 )
2018-03-13 08:04:09 +01:00
Federico Ficarelli
b594f89d5e
Treat tcl as extendable ( #7410 )
...
* Make tcl package extendable
* Let tk extend tcl
* Fix environment for Tcl extensions
2018-03-13 10:31:03 +09:00
Todd Gamblin
b4a9e37a98
Fix bugs in spack dependencies command ( #7435 )
...
- transitive dependencies were not being handled correctly
- restructure code to do recursion and mark visited packages properly
- add `-V` option to *not* expand virtuals in spack dependencies
2018-03-12 17:26:58 +09:00
Massimiliano Culpo
a1c8ce82f2
Constructing a SpecBuildInterface from another gives no inconsistent MRO ( #7457 )
...
fixes #7239
2018-03-12 17:07:08 +09:00
Denis Davydov
a4ed76c207
arpack-ng: add develop ( #7458 )
2018-03-12 09:06:37 +01:00
Levi Baber
39bfa12f22
astral: needs zip ( #7443 )
2018-03-10 10:56:59 +09:00
Patrick Gartung
82aa54151a
Fix bug in lua package instroduced by PR #7434 ( #7450 )
...
Fixes issue #7449
2018-03-09 16:57:46 -08:00
Levi Baber
3945b2adb4
Augustus hash ( #7447 )
...
* augustus: 3.3 package hash changed
* augustus: bamtools libraries now seem to be in lib64
* augustus: fix lib problem with older bamtools
2018-03-09 16:05:39 -08:00
Patrick Gartung
a4e75c7f0e
spack buildcache: allow unsigned tarballs ( #7440 )
...
This re-adds the option to create and install unsigned tarballs, now
with the -u option (--unsigned) rather than the -y option.
This also changes the "keys" command, replacing the -y/--yes-to-all
option with the -t/--trust option (which has the same effect but is
more-clearly named).
2018-03-09 15:29:10 -08:00
Levi Baber
38bb0e3e7d
resource: convert symlink to real path ( #7417 )
...
Fixes #7130
shutil.move expects a source path like "/x/y/" to be a directory and
fails if "/x/y" is a symlink. This invokes realpath on the source
path to avoid the issue.
2018-03-09 12:40:57 -08:00
sknigh
9d3d7d3216
new package: tcptrace ( #6993 )
...
Also added missing deps for libpcap: bison and flex
2018-03-09 10:46:57 -08:00
Levi Baber
1eeb918f0d
new package: cistem ( #7438 )
2018-03-09 10:19:10 -08:00
Eric
d2f0e57771
new package: py-bcbio-gff ( #7129 )
2018-03-09 10:14:53 -08:00
Eric
2f97aea4e4
new package: deconseq-standalone ( #7290 )
2018-03-09 10:13:41 -08:00
