When Spack installs a package, it stores repository package.py files
for it and all of its dependencies - any package with a Spack metadata
directory in its installation prefix.
It turns out this was too broad: this ends up including external
packages installed by Spack (e.g. installed by another Spack instance).
Currently Spack doesn't store the namespace properly for such packages,
so even though the package file could be fetched from the external,
Spack is unable to locate it.
This commit avoids the issue by skipping any attempt to locate and copy
from the package repository of externals, regardless of whether they
have a Spack repo directory.
On Cray platforms, we rely heavily on the module system to figure out
what targets, compilers, etc. are available. This unfortunately means
that we shell out to the `module` command as part of platform
initialization.
Because we run subcommands in a shell, we can get infinite recursion if
`setup-env.sh` and friends are in some init script like `.bashrc`.
This fixes the infinite loop by adding guards around `setup-env.sh`,
`setup-env.csh`, and `setup-env.fish`, to prevent recursive
initializations of Spack. This is safe because Spack never shells out to
itself, so we do not need it to be initialized in subshells.
- [x] add recursion guard around `setup-env.sh`
- [x] add recursion guard around `setup-env.csh`
- [x] add recursion guard around `setup-env.fish`
* fix binutils deptype for gcc
binutils needs to be a run dependency of gcc
* Fix gcc+binutils build on RHEL7+
static-libstdc++ is not available with system gcc.
Anyway, as it is for bootstraping, we do not really care depending on
a shared libstdc++.
Co-authored-by: Michael Kuhn <michael@ikkoku.de>
Spack was attempting to calculate abspath on the located config.guess
path even when it was not found (None); this commit skips the abspath
calculation when config.guess is not found.
The error message was not updated when the behavior of Spack environments
was changed to not automatically activate the local environment in #17258.
The previous error message no longer makes sense.
* bbcp: Update the URLs to use HTTPS.
The HTTP URLs do not work anymore.
* bbcp: Add missing libnsl dependency.
* bbcp: Rename the git-based version to match the branch name.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-pysam: add LDFLAGS to curl
* Update var/spack/repos/builtin/packages/py-pysam/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* New package: vbfnlo
* Add new package: vbfnlo
* Add recipe for looptools
* Add patch for looptools
* LoopTools: patch not needed (fixed by developers without changing version)
* Remove patch file as well
* Update package.py
* Update package.py
* Fix vbfnlo recipe for old version
Co-authored-by: iarspider <iarpsider@gmail.com>
When Spack installs a package, it stores repository package.py files
for it and all of its dependencies - any package with a Spack metadata
directory in its installation prefix.
It turns out this was too broad: this ends up including external
packages installed by Spack (e.g. installed by another Spack instance).
Currently Spack doesn't store the namespace properly for such packages,
so even though the package file could be fetched from the external,
Spack is unable to locate it.
This commit avoids the issue by skipping any attempt to locate and copy
from the package repository of externals, regardless of whether they
have a Spack repo directory.
* new package: ligra
* setup run environment
* tidy up
* Update var/spack/repos/builtin/packages/ligra/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/ligra/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/ligra/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* flake8
Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
`gcc` 9 and above have more warnings that break the `flatcc` build by default, because `-Werror` is enabled. This loosens the build up so that we can build with more compilers in Spack.
- [x] Add `-DFLATCC_ALLOW_WERROR=OFF` to `flatcc` CMake arguments
Co-authored-by: Frank Willmore <willmore@anl.gov>
* Buildcache:
* Try mocking an install of quux, corge and garply using prebuilt binaries
* Put patchelf install after ccache restore
* Add script to install patchelf from source so it can be used on Ubuntu:Trusty which does not have a patchelf pat package. The script will skip building on macOS
* Remove mirror at end of bindist test
* Add patchelf to Ubuntu build env
* Revert mock patchelf package to allow other tests to run.
* Remove depends_on('patchelf', type='build') relying instead on
* Test fixture to ensure patchelf is available.
* Call g++ command to build libraries directly during test build
* Flake8
* Install patchelf in before_install stage using apt unless on Trusty where a build is done.
* Add some symbolic links between packages
* Flake8
* Flake8:
* Update mock packages to write their own source files
* Create the stage because spec search does not create it any longer
* updates after change of list command arguments
* cleanup after merge
* flake8
fixes#17396
This prevents the class attribute to be inherited and
saves current maintainers from becoming the default
maintainers of every Cuda package.
We got rid of `master` after #17377, but users still want a way to get
the latest stable release without knowing its number.
We've added a `releases/latest` tag to replace what was once `master`.
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Fixes#16478
This allows an uninstall to proceed even when encountering pre-uninstall
hook failures if the user chooses the --force option for the uninstall.
This also prevents post-uninstall hook failures from raising an exception,
which would terminate a sequence of uninstalls. This isn't likely essential
for #16478, but I think overall it will improve the user experience: if
the post-uninstall hook fails, there isn't much point in terminating a
sequence of spec uninstalls because at the point where the post-uninstall
hook is run, the spec has already been removed from the database (so it
will never have another chance to run).
Notes:
* When doing spack uninstall -a, certain pre/post-uninstall hooks aren't
important to run, but this isn't easy to track with the current model.
For example: if you are uninstalling a package and its extension, you
do not have to do the activation check for the extension.
* This doesn't handle the uninstallation of specs that are not in the DB,
so it may leave "dangling" specs in the installation prefix
This PR creates a new spack package for
mumax: GPU accelerated micromagnetic simulator.
This uses the current beta version because
- it is somewhat dated, ~2018
- it is the only one that supports recent GPU kernels
