Commit graph

18610 commits

Author SHA1 Message Date
Adam J. Stewart
e27237c0bc
Fix import tests for a few packages (#20560) 2020-12-27 13:24:55 +01:00
Adam J. Stewart
f82c515bbc
Add missing setuptools dependencies (#20561) 2020-12-27 13:24:00 +01:00
Adam J. Stewart
fa56b9b1e2
py-sphinxcontrib-*: fix recursive imports (#20556) 2020-12-27 11:58:34 +01:00
Adam J. Stewart
0ed654aa70
py-pandas: add v1.2.0 (#20557) 2020-12-27 11:57:37 +01:00
Adam J. Stewart
e3cc50b2ba
py-fiona: add v1.8.18 and master (#20558) 2020-12-27 11:57:13 +01:00
Adam J. Stewart
6bd4e29c65
py-rasterio: add v1.1.8 (#20559) 2020-12-27 11:49:54 +01:00
Adam J. Stewart
b9402094a1
py-black: add v20.8b1 (#20565) 2020-12-27 11:48:45 +01:00
Adam J. Stewart
c199e3f33f
py-pathspec: add v0.8.1 (#20564) 2020-12-27 11:48:04 +01:00
Adam J. Stewart
d74cfa4c68
py-regex: add v2020.11.13 (#20563) 2020-12-27 11:47:33 +01:00
Adam J. Stewart
d8b265ba17
py-toml: add v0.10.2 (#20562) 2020-12-27 11:47:03 +01:00
Robert Underwood
860825ee14
llvm: provide fix for python dependencies (#20356)
Previously compiler-rt didn't correctly passthrough cmake
variables for python when building the various santizers.
This patch passes these variables through.

This patch may also correctly apply to any version of LLVM
to any version of LLVM that uses the newer monorepo style organization,
and any older llvm newer than 7.0.0 as long as the paths were set
appropriately.  However, this was not done so because it was not
tested with older LLVM releases.

Fixes #19908
See also: https://bugs.llvm.org/show_bug.cgi?id=48180
2020-12-26 09:47:37 -06:00
h-denpo
dd06c86559
dpdk: add conflicts('target=aarch64:') (#20550) 2020-12-25 16:43:05 -06:00
Tomoyasu Nojiri
f1d0ec7fc1
molden: Fix for aarch64 (#20549) 2020-12-25 16:41:52 -06:00
kuramoto-fj
d86c345413
PFAPACK: Add new package (#20365)
* PFAPACK: Add new package

* PFAPACK : fix flake8 errors

* add type=(build, run) to the recipe
2020-12-25 09:16:38 -06:00
kuramoto-fj
b56d1a77ad
Lis: Add new package (#20548)
* Lis: Add new package

* delete unnecessary inner quotes
2020-12-25 09:15:13 -06:00
Toyohisa Kameyama
1daf6d3df7
openwsman: fix detect python executable (#20317)
* openwsman: fix detect python executable

- use spack's python insted of system's python
- Add variant to use python.
- fix dependency.
- support python2.

* format fixed.

* fix python command.
2020-12-25 09:13:31 -06:00
Tomoyasu Nojiri
a7017f8e38
openfdtd: Add version 2.6.0 (#20460) 2020-12-25 09:12:42 -06:00
Tomoyasu Nojiri
db5c6e8215
openstf: Add version 1.7.0 (#20461) 2020-12-25 09:12:11 -06:00
a-saitoh-fj
637620a408
New package: py-pydmd (#19809)
* New package: py-pydmd

* modified:package.py

* modified: package.py
2020-12-25 00:01:21 -06:00
lorddavidiii
9c03ddbb44
cfitsio: new versions and new url sheme (#20084)
* cfitsio: new versions and new url sheme

* cfitsio: fix version order
2020-12-24 23:59:28 -06:00
Tom Payerle
0150b394d7
mumps: Fix dependency issues in shared licenses (#20197)
See issue #19644
This script makes lib[cdsz]mumps.so explicitly depend on
libmumps_common.so (and libmpiseq.so if ~mpi)
2020-12-24 23:50:27 -06:00
Cameron Stanavige
52e03b5528
unifyfs: dependency changes and new release (#20271)
This updates the UnifyFS packages to account for the latest v0.9.1
release.

Updates required and optional dependencies for the respective
releases.

Locks margo and mercury dependencies at specific versions while
integration with their latest versions is still in progress.
2020-12-24 23:46:11 -06:00
Toyohisa Kameyama
5e0376bb3b
openipmi: fix dependency and add version 2.0.29 (#20276)
* openipmi: fix dependency and add version 2.0.29

- Add perl and readline dependency
- fix dependency type
- Fix readline bug in 2.0.27 (d1dd570cf7/)
- Add 2.0.29

* Add patch file.
2020-12-24 23:34:30 -06:00
Asher Mancinelli
09f6bd2a0f
adding cce to compilers that patch gdbm (#20353) 2020-12-24 23:07:22 -06:00
Sreenivasa Murthy Kolam
ba62dc3dce
fix rocm_3.8.0 build error for rocprim,rocrand,rocfft packages (#20446)
* fix rocm_3.8.0 build error for rocprim,rocrand,rocfft packages

* fix flake8 errors
2020-12-24 22:54:59 -06:00
Joshua S Brown
4c8b773a42
Add pem package file (#20447)
* Add pem package file

* Cleanup formatting

* Replace homepage with url to ReadtheDocs

* Simplify package description
2020-12-24 22:54:23 -06:00
Chuck Atkins
0a32e57e51
mesa: Add missing expat dependency (#20459) 2020-12-24 22:53:01 -06:00
Tomoyasu Nojiri
ac68113406
libjson: Fix install parameters (#20470) 2020-12-24 22:46:47 -06:00
Hadrien G
58cf6d7dbd
[acts] Add version 4 (#20472)
* Add acts v4

* Please flake8
2020-12-24 22:45:50 -06:00
Gilles Gouaillardet
c2ce7c65b3
xios: add support for Fujitsu compilers (#20474) 2020-12-24 22:44:56 -06:00
Filippo Spiga
de068f0b52
Adding CUDA 11.2.0 (#20477) 2020-12-24 22:42:47 -06:00
Toyohisa Kameyama
edb25911e8
salmon-tddft: new package. (#20543)
* salmon-tddft: new package.

* remove debug print.

* remove duplicate line.
2020-12-24 22:41:11 -06:00
QuellynSnead
6684cb165a
Starting with HDF5 1.10.0, the H5FD_class_t structure has a new (#20529)
"terminate" member.  Initialize it to NULL.
2020-12-24 22:35:19 -06:00
QuellynSnead
c214e4dd2d
fftw: PGI compiler has trouble with avx2/avx-512 SIMD support (#20546)
* PGI compiler has trouble with avx2 SIMD support
(https://github.com/FFTW/fftw3/issues/78)

* Hew to the project's preferred indentation standard.

* Expand '%nvhpc' logic to include '%pgi'.

* Exceeded the max line-length.

* Break up the long compound statement into nested if's.

* Inadvertently picked up an extraneous file.

* PGI compiler has trouble with avx2/avx-512 SIMD support, too.
2020-12-24 22:33:57 -06:00
QuellynSnead
e9f0473e26
zoltan: Add PGI runtime libs to LDFLAGS (#20547)
* Add PGI runtime libs to LDFLAGS when '%pgi' in spec.

* Revert "Add PGI runtime libs to LDFLAGS when '%pgi' in spec."

This reverts commit 31c3ef8ea22156fdeef6f82a29e9cea8ac86f006.

* Add PGI runtime libs to LDFLAGS when '%pgi' in spec.
2020-12-24 22:32:58 -06:00
Kody J. Everson
5add3a2f4d
Dropped parametis dependency in 0.82 release (#20481) 2020-12-24 17:32:33 -06:00
Tomoyasu Nojiri
81f91de50e
nbdkit: Fix configure arg (#20488) 2020-12-24 17:18:05 -06:00
Tiziano Müller
5d2c09e19e
Add libvori and support for libvori (and spglib) in CP2K (#20508)
* packages: initial commit of libvori

* cp2k: add support for libvori

* cp2k: add support for spglib
2020-12-24 17:12:34 -06:00
Mark Olesen
999b35cf5f
openfoam: update for version 20.12 (#20533)
Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2020-12-24 17:05:43 -06:00
a-saitoh-fj
4ef3fb9434
Fixed for merging patches for Fujitsu compiler in version 0.3.13 (#20539) 2020-12-24 17:05:01 -06:00
a-saitoh-fj
9066982168
Update to the latest version (1.6.0) (#20540) 2020-12-24 17:04:04 -06:00
kuramoto-fj
7d267e1440
mptensor: Add new package (#20542) 2020-12-24 16:59:02 -06:00
Tomoyasu Nojiri
b1a6e583c0
babelflow: Add spec (#20544) 2020-12-24 16:54:24 -06:00
Omri Mor
cfbe3aa056
Remove more variables from build environment (#20156)
GCC looks for included files based on several env vars.
Remove C_INCLUDE_PATH, CPLUS_INCLUDE_PATH, and OBJC_INCLUDE_PATH
from the build environment to ensure it's clean and prevent
accidental clobbering.
2020-12-24 16:48:53 -06:00
Alexander Baumgarten
91e106ae7c
libgff: new package at version 2.0.0 (#20233)
* libgff: new package at version 2.0.0

* Removed default cmake function, fixed flake8 error

* Fixed errors
2020-12-24 16:48:01 -06:00
Michael Kuhn
2d1c4e4b5d
sqlite: add 3.34.0 (#20354) 2020-12-24 16:47:17 -06:00
Dr. Christian Tacke
741a0b498a
py-lxml: Add Version 4.6.1 (#20361)
Also switch homepage to https.
2020-12-24 16:46:43 -06:00
Paul R. C. Kent
763fc989c5
New versions: py-sphinxcontrib-bibtex 2.2.0 and py-pybtex-docutils 0.2.2 (#20438)
* Add v2.0.0

* Add 0.2.2

* Improve packages

* No trailing
2020-12-24 16:46:28 -06:00
Brian Van Essen
6c00ebab16
Add lbann cmake flags (#20452)
* Adding support for the CMake flags in LBANN that are missing.

* Added new flag to OpenCV dependency and removed negative variants
since OpenCV no longer turns on everything by default.  Removed CMake
flags in LBANN that have been deprecated.

* Removed type='build' flags from dependencies so that they get linked
into a environment's view.

* Removed type='build' flags from dependencies so that they get linked
into a environment's view.  Fixed DiHydrogen variant to enable
DistConv feature, renamed to +distconv from +legacy.  Added conflicts
line to indicated that DistConv and ROCm don't work with +half
support.

* Fixed Flake8 and cleaned up ordering of variants.

* Flake8

* Backed out changes to not mark and cmake and ninja as build
dependencies, which was introduced to make sure that they appear in
a spack environment.

* Backed out changes to not mark doc related packages as build
dependencies, which was introduced to make sure that they appear
in a spack environment.

* Fixed how recipe communicates the intent to build and run tests to the
package CMake.
2020-12-24 16:46:12 -06:00
Joshua S Brown
ee0ec12603
Add py-ez-setup package file (#20520)
* Add py-ez-setup package file

* Cleanup formatting

* Cleanup formatting take 2
2020-12-24 16:43:15 -06:00