Glenn Johnson
8108501aca
add version 0.5.1 to r-exactextractr ( #20946 )
2021-01-16 15:17:08 +01:00
Glenn Johnson
0dbdfa20ae
add version 1.0.7 to r-factoextra ( #20945 )
2021-01-16 15:16:49 +01:00
Glenn Johnson
7c5ea8d3b4
add version 2.4 to r-factominer ( #20943 )
2021-01-16 15:16:35 +01:00
Glenn Johnson
47a4727ac5
add version 4.0.4 to r-ff ( #20942 )
2021-01-16 15:15:30 +01:00
Glenn Johnson
d9ef32ceff
add version 4.4.1 to r-statnet-common ( #20941 )
2021-01-16 15:15:13 +01:00
Glenn Johnson
41cc3404a4
add version 0.9-7 to r-sf ( #20851 )
2021-01-16 15:13:54 +01:00
Alberto Chiusole
bf660bff04
Update IOR to 3.3.0 + set as preferred ( #20986 )
2021-01-16 15:13:15 +01:00
Glenn Johnson
d3f78eacdf
add version 0.1.0 to r-generics ( #20987 )
2021-01-16 15:12:21 +01:00
Glenn Johnson
ba024fdb7d
add version 1.0.5 to r-getoptlong ( #20988 )
2021-01-16 15:12:08 +01:00
Glenn Johnson
fa33c534f7
add version 0.1-8.1 to r-jpeg ( #20989 )
2021-01-16 15:11:53 +01:00
Glenn Johnson
5abf70d48d
add version 0.1.22 to r-ggdendro ( #20991 )
2021-01-16 15:11:28 +01:00
Glenn Johnson
74418d1aed
add version 0.3.2 to r-ggforce ( #20992 )
2021-01-16 15:11:13 +01:00
Glenn Johnson
d409004f70
new package: r-isoband ( #20993 )
2021-01-16 15:10:57 +01:00
Glenn Johnson
6acfca4635
add version 0.0.5 to r-ggplotify ( #20994 )
2021-01-16 15:10:37 +01:00
Glenn Johnson
9bb72ea946
add version 0.9.0 to r-ggrepel ( #20995 )
2021-01-16 15:10:21 +01:00
Glenn Johnson
e87b1b7aa4
add version 0.5.3 to r-ggridges ( #20996 )
2021-01-16 15:10:08 +01:00
Glenn Johnson
a98e48525d
add version 0.4.7 to r-ggvis ( #20997 )
2021-01-16 15:09:46 +01:00
Cyrus Harrison
710fe02a9a
update dray package with new versions and to fix issue with test variant ( #19583 )
...
* update dray package with new versions and to fix issue with test variant
* fix comment typo
* flake8 remove trailing white space on last line
2021-01-15 17:14:06 -06:00
QuellynSnead
330c48b244
zoltan: source code location change ( #20787 )
2021-01-15 10:59:38 +01:00
Glenn Johnson
ad0c0e81fd
r-pixmap: added new package ( #20795 )
2021-01-15 10:51:35 +01:00
Glenn Johnson
59cf4c9039
add version 0.8-18 to r-amap ( #20803 )
2021-01-15 10:50:33 +01:00
Glenn Johnson
9756167049
add version 5.4-1 to r-ape ( #20804 )
2021-01-15 10:50:08 +01:00
Glenn Johnson
ee7ce1f44f
add version 2.0.3 to r-argparse ( #20805 )
2021-01-15 10:49:40 +01:00
Glenn Johnson
1798ae9b39
add version 1.2.1 to r-backports ( #20806 )
2021-01-15 10:47:38 +01:00
Glenn Johnson
8599480ed9
add version 3.1-4 to r-bayesm ( #20807 )
2021-01-15 10:47:14 +01:00
Glenn Johnson
13d0618f03
add version 0.4.2.3 to r-bibtex ( #20815 )
2021-01-15 10:46:49 +01:00
Glenn Johnson
8f7b50b01f
add version 2.4-1 to r-bio3d ( #20816 )
2021-01-15 10:46:17 +01:00
Glenn Johnson
3d3761f8f0
add version 4.0.4 to r-bit ( #20818 )
2021-01-15 10:45:52 +01:00
Glenn Johnson
0024c8df08
add version 1.2.1 to r-blob ( #20819 )
2021-01-15 10:45:26 +01:00
Glenn Johnson
d2c3fb5e45
add version 2.6 to r-rmarkdown ( #20838 )
2021-01-15 10:44:54 +01:00
Glenn Johnson
46c71d070f
add version 0.2.3 to r-cubist ( #20841 )
2021-01-15 10:44:27 +01:00
Glenn Johnson
df29b9f55e
add version 1.5-12.2 to r-cairo ( #20842 )
2021-01-15 10:43:21 +01:00
Glenn Johnson
699a1e7c86
add version 3.4.5 to r-processx ( #20843 )
2021-01-15 10:42:57 +01:00
Glenn Johnson
bbc733b84c
add version 3.0-10 to r-car ( #20844 )
2021-01-15 10:42:28 +01:00
Glenn Johnson
84f5f8437f
r-lifecycle: new package at v0.2.0 ( #20845 )
2021-01-15 10:42:06 +01:00
Glenn Johnson
0d27aa685d
add version 1.0.1 to r-caracas ( #20846 )
2021-01-15 10:41:26 +01:00
Glenn Johnson
0fe9fa6a75
add version 3.0-4 to r-cardata ( #20847 )
2021-01-15 10:40:46 +01:00
Glenn Johnson
c270629d23
add version 1.2.2.2 to r-modelmetrics ( #20849 )
2021-01-15 10:40:28 +01:00
Glenn Johnson
319a3c93f8
add version 1.18.1 to r-catools ( #20850 )
2021-01-15 10:39:37 +01:00
Glenn Johnson
ec307c83a6
add version 2.0.0 to r-checkmate ( #20852 )
2021-01-15 10:38:27 +01:00
Glenn Johnson
3ad021eef5
add version 0.4.10 to r-checkpoint ( #20853 )
2021-01-15 10:38:04 +01:00
Glenn Johnson
33325609be
add version 2.3-56 to r-chron ( #20854 )
2021-01-15 10:37:35 +01:00
Glenn Johnson
aea0740cdc
add version 0.1.2 to r-globaloptions ( #20855 )
2021-01-15 10:35:18 +01:00
Glenn Johnson
5cfb19fb34
add version 0.4-3 to r-classint ( #20857 )
2021-01-15 10:34:55 +01:00
Glenn Johnson
89b745ed3f
add version 2.2.0 to r-cli ( #20858 )
2021-01-15 10:34:33 +01:00
Glenn Johnson
d2f99bb42b
add version 0.7.1 to r-clipr ( #20859 )
2021-01-15 10:34:09 +01:00
Glenn Johnson
5eec0e418c
add version 0.3-58 to r-clue ( #20860 )
2021-01-15 10:33:48 +01:00
Glenn Johnson
532ca134f3
add version 1.3.7 to r-clustergeneration ( #20861 )
2021-01-15 10:30:48 +01:00
Glenn Johnson
c654ce7557
add version 0.19-4 to r-coda ( #20862 )
2021-01-15 10:20:44 +01:00
Glenn Johnson
d2f7e6d020
add version 1.3-1 to r-coin ( #20863 )
2021-01-15 10:16:32 +01:00
Glenn Johnson
e0f75b6fc3
add version 2.0-0 to r-colorspace ( #20864 )
2021-01-15 10:15:55 +01:00
mic84
7762b8acdd
amrex: add ROCm support ( #20809 )
2021-01-15 01:14:55 -08:00
Glenn Johnson
3b9144a4a4
add version 0.3.6 to r-vctrs ( #20878 )
2021-01-15 10:07:58 +01:00
Glenn Johnson
c8e4ded260
add version 0.4.10 to r-rlang ( #20796 )
2021-01-15 10:07:26 +01:00
Glenn Johnson
bf6b8cfe6e
add version 2.0-1 to r-compositions ( #20865 )
2021-01-15 10:06:45 +01:00
Glenn Johnson
1b78ca678a
add version 5.0.2 to r-rcppparallel ( #20866 )
2021-01-15 10:06:23 +01:00
Glenn Johnson
1973a01c9c
add version 1.0-1 to r-copula ( #20867 )
2021-01-15 10:06:04 +01:00
Glenn Johnson
faa1f84d57
add version 1.1.0.1 to r-crosstalk ( #20869 )
2021-01-15 10:05:37 +01:00
Glenn Johnson
a7316a24ca
add version 1.0.0 to r-crul ( #20870 )
2021-01-15 10:05:17 +01:00
Glenn Johnson
e596e6ba3a
add version 0.2-3 to r-deldir ( #20873 )
2021-01-15 10:02:47 +01:00
Glenn Johnson
878d071974
add version 2.2-5 to r-deoptim ( #20874 )
2021-01-15 10:02:16 +01:00
Glenn Johnson
5a29444ac4
add version 1.28 to r-desolve ( #20875 )
2021-01-15 10:01:56 +01:00
Glenn Johnson
0c617d81cb
add version 1.4.2 to r-httr ( #20876 )
2021-01-15 10:01:34 +01:00
Glenn Johnson
b7d992dd03
add version 1.5.8 to r-dicekriging ( #20877 )
2021-01-15 10:01:03 +01:00
Glenn Johnson
1e9eae7c1c
add version 1.5 to r-rngtools ( #20887 )
2021-01-15 09:59:52 +01:00
Glenn Johnson
9a2155f7b1
add version 0.6.27 to r-digest ( #20882 )
2021-01-15 09:55:55 +01:00
Glenn Johnson
53c9b0232b
add version 1.3-3 to r-dismo ( #20883 )
2021-01-15 09:55:28 +01:00
Glenn Johnson
d1c815ddb9
add version 0.9-15 to r-diversitree ( #20884 )
2021-01-15 09:55:06 +01:00
Glenn Johnson
7b80796882
add version 1.3.7 to r-domc ( #20885 )
2021-01-15 09:54:49 +01:00
Glenn Johnson
8697cf826d
add version 1.0.16 to r-doparallel ( #20886 )
2021-01-15 09:54:26 +01:00
Glenn Johnson
e1fd840ccc
r-dosnow: add v1.0.19 ( #20888 )
2021-01-15 09:53:29 +01:00
Glenn Johnson
52d2d24a4a
r-dt: add v0.17 ( #20889 )
2021-01-15 09:52:28 +01:00
Glenn Johnson
1df3d65127
r-dtw: add v1.22-3 ( #20890 )
2021-01-15 09:51:58 +01:00
a-saitoh-fj
de085efd7d
libzmq: add platform conditions to libbsd dependency ( #20893 )
2021-01-15 09:50:49 +01:00
darmac
1998630ca2
libvips: added v8.10.5 ( #20902 )
2021-01-15 09:48:56 +01:00
Adam J. Stewart
92b6d3ac67
py-anuga: add new package ( #20782 )
2021-01-15 09:47:18 +01:00
Abhinav Bhatele
2c44e62813
hatchet: updated urls ( #20908 )
2021-01-15 09:23:54 +01:00
Thomas Green
58d5b73ba4
Improve gcc detection in llvm. ( #20189 )
...
Co-authored-by: Tom Scogland <tom.scogland@gmail.com>
Co-authored-by: Thomas Green <ca-tgreen@gw4a64fxlogin00.head.gw4.metoffice.gov.uk>
2021-01-15 09:22:58 +01:00
Glenn Johnson
56904d5834
r-plotmo: add v3.6.0 ( #20909 )
2021-01-15 09:16:59 +01:00
Glenn Johnson
1dc48dc92a
r-ecp: add v3.1.3 ( #20910 )
2021-01-15 09:16:35 +01:00
Adam J. Stewart
ac2b9a3e24
py-fiscalyear: add v0.3.0 ( #20911 )
2021-01-15 09:16:08 +01:00
Glenn Johnson
3233debf1b
r-ellipse: add v0.4.2 ( #20912 )
2021-01-15 09:15:33 +01:00
Glenn Johnson
a438828ec9
r-energy: add v1.7-7 ( #20914 )
2021-01-15 09:14:56 +01:00
Glenn Johnson
fca652ab65
r-envstats: add v2.4.0 ( #20915 )
2021-01-15 09:14:02 +01:00
Glenn Johnson
05906ab57e
r-expint: add v0.1-6 ( #20917 )
2021-01-15 09:13:30 +01:00
Tomoyasu Nojiri
ed4dea2dc2
cln: add build dependency on texinfo ( #20928 )
2021-01-15 09:07:18 +01:00
Glenn Johnson
e160f649b8
r-expm: add v0.999-6 ( #20918 )
2021-01-15 09:03:58 +01:00
Glenn Johnson
4bab89bbff
r-farver: add v2.0.3 ( #20919 )
2021-01-15 09:03:20 +01:00
Glenn Johnson
7fe5430d0c
r-fftwtools: add v0.9-9 ( #20920 )
2021-01-15 09:02:49 +01:00
Glenn Johnson
3e93175b65
r-fields: add v11.6 ( #20921 )
2021-01-15 09:02:13 +01:00
Glenn Johnson
266132c06d
r-fit-models: add v0.64 ( #20922 )
2021-01-15 09:01:14 +01:00
Glenn Johnson
71615632de
r-fitdistrplus: add v1.1-3 ( #20923 )
2021-01-15 09:00:27 +01:00
Glenn Johnson
0f40d8b59f
r-flexmix: add v2.3-17 ( #20924 )
2021-01-15 08:59:49 +01:00
Tomoyasu Nojiri
863bdd5115
libconfig: add build dependency on texinfo ( #20930 )
2021-01-15 08:45:14 +01:00
Glenn Johnson
a23404c7a7
r-ellipsis: added v0.3.1 ( #20913 )
2021-01-15 08:40:41 +01:00
Glenn Johnson
7cb4a8afe0
r-rle: new package ( #20916 )
...
Common 'base' and 'stats' methods for 'rle' objects, aiming to make it
possible to treat them transparently as vectors.
2021-01-15 08:39:44 +01:00
Adam J. Stewart
1e22b5a00b
PCL: add new package ( #20933 )
2021-01-15 08:38:56 +01:00
h-denpo
ef764deb54
pocl: added v1.6 ( #20932 )
...
Made version 1.5 or lower conflicts with a64fx.
2021-01-15 08:29:27 +01:00
Tomoyasu Nojiri
03f6717c38
fujitsu-fftw: Add new package ( #20824 )
2021-01-14 19:34:12 +01:00
Henrique Mendonça
7dde96b795
py-hovorod: fix typo on variant name in conflicts directive ( #20906 )
2021-01-14 19:27:41 +01:00
Kelly (KT) Thompson
040f69f931
py-h5py: HDF5_DIR is needed for ~mpi too ( #20905 )
...
For the `~mpi` variant, the environment variable `HDF5_DIR` is still required. I moved this command out of the `+mpi` conditional.
2021-01-14 13:27:04 -05:00
Glenn Johnson
89fd0faa40
r-class: added v7.3-17 ( #20856 )
2021-01-14 19:24:05 +01:00
Glenn Johnson
5d62b369de
r-covr: added v3.5.1 ( #20868 )
2021-01-14 19:23:25 +01:00
Glenn Johnson
1a99c2ee46
r-diffusionmap: added v1.2.0 ( #20881 )
2021-01-14 19:22:40 +01:00
Glenn Johnson
49bdbfe08b
r-e1071: added v1.7-4 ( #20891 )
2021-01-14 19:21:40 +01:00
Shintaro Iwasaki
94cb97e849
llvm-doe: added new package ( #20719 )
...
The package contains duplicated code from llvm/package.py,
will supersede solve.
2021-01-14 19:20:04 +01:00
Tomoyasu Nojiri
d0891d5d26
astyle: Fix makefile for install parameter ( #20899 )
2021-01-14 11:56:24 -06:00
darmac
b423db6ddb
r-sf: fix dependency error ( #20898 )
2021-01-14 09:20:59 -06:00
Chuck Atkins
08e5baccef
ecp-data-vis-sdk: Combine the vis and io SDK packages ( #20737 )
...
This better enables the collective set to be deployed togethor satisfying
eachothers dependencies
2021-01-14 08:24:27 -05:00
mic84
f6dd85b2b0
amrex: fix handling of CUDA arch ( #20786 )
...
* amrex: fix handling of CUDA arch
* amrex: fix style
* amrex: fix bug
* Update var/spack/repos/builtin/packages/amrex/package.py
* Update var/spack/repos/builtin/packages/amrex/package.py
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-01-13 18:53:57 -08:00
Chuck Atkins
4f49b1a930
adios2: Define custom libs property ( #20848 )
2021-01-13 17:42:36 -05:00
Chuck Atkins
fc4e66ef3c
adios2: Add 2.7.0 release ( #20800 )
...
This release also includes the HDF5 VOL plugin so I've added an additional
funciton to ensure the HDF5_PLUGIN_PATH env var gets updated with the adios
install prefix
2021-01-13 15:02:30 -05:00
Mark W. Krentel
54a4f0fc35
intel-xed: add version 12.0.1 ( #20676 )
...
* intel-xed: add version 12.0.1
Rework the version numbers for intel-xed, now that xed has actual
releases and tags. Add releases 11.2.0 and 12.0.1. Rename 2019.03.01
to 10.2019.03 as a legacy version that fits in the new order.
Add variant +pic to compile libxed.a with PIC code so that it can be
linked into another shared library.
Add conflict for aarch64.
Add mwkrentel as maintainer.
2021-01-13 11:46:38 -08:00
Kurt Sansom
21a0a2f6bb
Miniconda: update ( #20814 )
2021-01-13 13:03:34 -06:00
steffen-AEI
bf0993c0d9
Add version 1.14.0 ( #20836 )
...
1.14.0 compiles with gcc@10.2.0, while 1.13.0 doesn't
2021-01-13 13:02:59 -06:00
Andrew-Dunning-NNL
a91dbcfa8c
py-pyfiglet:new recipe ( #20792 )
...
* py-pyfiglet:new recipe
* Update var/spack/repos/builtin/packages/py-pyfiglet/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-pyfiglet: use pypi url
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-13 12:54:40 -06:00
Harmen Stoppels
3f1c264148
dbcsr: added rocm support ( #20835 )
...
Co-authored-by: Tiziano Müller <tm@dev-zero.ch>
2021-01-13 15:54:23 +01:00
Glenn Johnson
b9dfda19c1
r-blockmodeling: added v1.0.0 ( #20820 )
2021-01-13 15:45:59 +01:00
Glenn Johnson
661b94eba5
r-xfun: added v0.20 ( #20821 )
2021-01-13 15:19:14 +01:00
Glenn Johnson
241c8a0695
r-boot: added v1.3-25 ( #20823 )
2021-01-13 15:18:36 +01:00
Harmen Stoppels
dec35566d2
hipblas: add dependency on rocsolver ( #20832 )
2021-01-13 15:14:58 +01:00
Christoph Junghans
8af010ce5d
votca-*: add v1.6.4 ( #20822 )
...
* votca-tools: add v1.6.4
* votca-csg: add v1.6.4
* votca-csg-tutorials: add v1.6.4
* votca-csgapps: add v1.6.4
* votca-xtp: add v1.6.4
* csgapps: master/stable version got merged into votca-csg
2021-01-13 07:07:53 -07:00
darmac
ccc1bb7324
libtomlc99: added v0.2020.12.23 ( #20825 )
2021-01-13 09:55:06 +01:00
Mark W. Krentel
991ff2fd94
hpctoolkit: add variant to support rocm ( #20826 )
...
Add early support for ROCM on AMD GPUs, for develop branch only.
Requires ROCM packages to be specified as external packages.
2021-01-13 09:54:17 +01:00
darmac
8b9f4d53da
solr: add java as runtime dependency ( #20827 )
2021-01-13 09:52:00 +01:00
a-saitoh-fj
5cfa3d5c59
libzmq: add libbsd as a dependency ( #20828 )
...
libzmq started using strlcpy from v4.3.3
2021-01-13 09:48:03 +01:00
Tiziano Müller
5443558717
cp2k: add v8.1 ( #20829 )
2021-01-13 09:39:35 +01:00
Massimiliano Culpo
0bd76ac9e6
concretizer: require at least a dependency type to say the dependency holds
...
fixes #20784
Similarly to the previous bug, here we were deducing
conditions to be imposed on nodes that were not part
of the DAG.
2021-01-12 22:23:39 -08:00
Massimiliano Culpo
ed8fe68cf2
concretizer: dependency conditions cannot hold if package is external
...
fixes #20736
Before this one line fix we were erroneously deducing
that dependency conditions hold even if a package
was external.
This may result in answer sets that contain imposed
conditions on a node without the node being present
in the DAG, hence #20736 .
2021-01-12 22:23:39 -08:00
Robert Blake
a2eb587a95
py-torchvision@0.5.0 depends on py-torch@1.4.1 ( #20811 )
2021-01-12 17:13:43 -06:00
Massimiliano Culpo
b3419c06c5
libyogrt: remove conflicts triggered by an invalid value ( #20794 )
...
fixes #20611
The conflict was triggered by an invalid value of the
'scheduler' variant. This causes Spack to error when libyogrt
facts are validated by the ASP-based concretizer.
2021-01-12 17:11:50 -06:00
archxlith
e10c0a6a34
New package [py-pylops] ( #20777 )
...
* New package [py-pylops]
* [py-pylops] Seperated optional dependecies into a variant called advanced
2021-01-12 12:36:53 -06:00
Harmen Stoppels
1d7babe955
dbcsr, cp2k: fix cuda arch conflicts in asp concretizer ( #20784 )
2021-01-12 18:01:32 +01:00
christopher coffey
ecc59de51d
kraken2: added v2.1.1 ( #20785 )
2021-01-12 10:43:55 +01:00
downloadico
1a45ce132d
hybrid-lambda: added new package ( #20754 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-12 10:42:23 +01:00
ketsubouchi
506da6891a
dsqss: new package at v2.0.3 ( #20723 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-12 10:00:30 +01:00
a-saitoh-fj
c6f13cb20f
py-distributed: added v2020.12.0 ( #20722 )
2021-01-12 09:57:53 +01:00
Harmen Stoppels
a2a0262f79
hip: fix naming of libraries when installing from tarballs ( #20780 )
...
There's two issues with hip where it tries to autodetect the patch
version number from git (when installed), but it does not check if it
even is inside of a git repo. The result is we end up with a shared lib
with a trailing dash in the library suffix: `libamd64.so.x.y.z-`, which
confuses GCC. The patch tries to check if the `.git` folder exists, and
if it does not, it handles version numbering the same as when git was
not installed previously.
2021-01-12 09:48:03 +01:00
archxlith
60a58d89e7
New package [py-scikit-fmm] ( #20775 )
...
* New package [py-scikit-fmm]
* [py-scikit-fmm] Removed redundant depends_on
2021-01-11 16:36:29 -06:00
AMD Toolchain Support
e7ed832c8d
spack recipe for amdlibm ( #20487 )
2021-01-11 12:13:54 -08:00
archxlith
8066ca8a8e
New package [py-spgl1] ( #20776 )
2021-01-11 12:49:36 -06:00
AMD Toolchain Support
de3504ca29
wrf: add AOCC support for v4.2 ( #20772 )
2021-01-11 12:13:59 +01:00
Adam J. Stewart
ec0226ec6e
libquo: add maintainer ( #20583 )
2021-01-11 11:55:53 +01:00
lorddavidiii
a9d6e69789
New versions of opencl-c-headers, opencl-clhpp and ocl-icd ( #20724 )
...
* opencl-c-headers: add new version 2020.12.18
* opencl-clhpp: add new version 2.0.13
* opencl-headers: now supports OpenCL 3.0 with new versions of opencl-c-headers and opencl-clhpp
* ocl-icd: add new version 2.2.14 add now can provide OpenCL 3.0
2021-01-11 11:39:02 +01:00
Erik Schnetter
e9c2bc5d7f
gsl: added v2.6 ( #20726 )
2021-01-11 11:13:44 +01:00
darmac
c199f37e94
ply: added new package ( #20764 )
2021-01-11 10:46:04 +01:00
Erik Schnetter
9049829c8e
asdf-cxx: correct swig dependency details ( #20752 )
2021-01-11 10:29:55 +01:00
Axel Huebl
53b70451fd
openPMD-api: added v0.13.1 ( #20761 )
2021-01-11 09:55:26 +01:00
Aurelien Bouteiller
63eabae0ec
PaRSEC: added new package ( #20170 )
...
PaRSEC: the Parallel Runtime Scheduler and Execution Controller for micro-tasks on distributed heterogeneous systems.
Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
2021-01-11 09:25:26 +01:00
Keita Iwabuchi
9a1ab9a8a3
metall: added v0.8 and v0.9 ( #20763 )
2021-01-11 09:11:09 +01:00
Erik Schnetter
dc0deb3e3d
hwloc: New version 2.4.0 ( #20727 )
...
New versions 1.11.12, 1.11.13, 2.3.0, 2.4.0.
2021-01-10 22:21:26 +01:00
Teodor Nikolov
a190876bdc
COSMA: latest version ( #20760 )
2021-01-10 19:58:30 +01:00
eugeneswalker
d6ba623669
llvm-amdgpu: add variant: openmp (bool) ( #20759 )
2021-01-10 19:57:28 +01:00
Erik Schnetter
5dacb1b550
libjpeg-turbo: added v2.05 and v2.06 ( #20770 )
2021-01-10 10:36:27 +01:00
Erik Schnetter
dc52168feb
libevent: added v2.1.12, v2.1.11 and v2.1.10 ( #20771 )
2021-01-10 10:35:50 +01:00
Andrew W Elble
0c1e99b3c8
py-tensorflow: version updates, add 2.4.0 ( #20702 )
...
* py-tensorflow: 2.4.0 and dependency updates
* minor version updates
* fix numpy dependency
* dependency rework: compatible release issues, start to clarify cuda versions
* --incompatible_no_support_tools_in_action_inputs was removed in bazel 3.6
* adjustment to versions of cuda dependency, also make sure that
patches/filters still apply to certain release trains.
* python 3.8 and tf < 2.2 have issues
* missed py-grpcio version bump
2021-01-09 12:03:49 -06:00
Seth R. Johnson
1e3f6489c4
ForTrilinos: add version 2.0.0 ( #20695 )
...
I finally figured out how to get version 2.0.0 to play nice with the dev
versions. Yuck.
2021-01-08 15:48:23 -05:00
Robert Cohn
ea0b001597
intel-oneapi-mpi: virtual provider support ( #20732 )
...
Set up environment and dependent packages properly when building
with intel-oneapi-mpi as a dependency MPI provider (e.g. point to
mpicc compiler wrapper).
2021-01-08 10:47:03 -08:00
mic84
1d4cbcd93f
amrex: expand CUDA support ( #20740 )
...
* amrex: expand CUDA support
2021-01-08 09:44:59 -08:00
Robert Underwood
2f19346c9a
py-scikit-learn: do parallel builds of C extension ( #20733 )
...
Enabled parallel builds of the C-extension upto the parallelism allowed
by spack.
https://scikit-learn.org/stable/developers/advanced_installation.html#parallel-builds
2021-01-07 14:58:33 -06:00
Jen Herting
b6e32a265b
New package: py-testfixtures ( #20432 )
...
* [py-testfixtures] copied from slpits
* [py-testfixtures] removed extends('python')
* [py-testfixtures] removed unnecessary dependencies
2021-01-07 12:29:33 -06:00
Andrew W Elble
1ada637613
py-six: 1.15.0 ( #20710 )
...
* py-six: 1.15.0
* depend on specific python version(s)
2021-01-06 19:21:39 -06:00
Joshua S Brown
b933454250
Fix dependencies and https address of gitpython ( #20669 )
...
* Fix dependencies and https address of gitpython
* Fix gitpython, use pypi repo, fix checksums
* Use pypi
* Revert to python 3.4 dependency
2021-01-06 19:21:11 -06:00
Gabriel Rockefeller
f1a4ac5c37
eospac: add version 6.4.2beta ( #20681 )
...
* eospac: add version 6.4.2beta
* eospac: clarify EOSPAC "beta" versions
Compared to 6.4.1, EOSPAC 6.4.2beta contains only one change, a fix
for an inability to read some SESAME files in ASCII format. From the
release announcement,
EOSPAC 6.4.2beta has been released for general use as the latest
(i.e., eospac6-latest) versions. This is a small patch to the
previously-released version 6.4.1, which was requested by an
affected user.
But the "beta" label can cause confusion, especially when a beta
version is the new preferred version, as is the case here. As
suggested by reviewers, add a comment clarifying EOSPAC's use of
"beta".
2021-01-06 18:06:17 -06:00
Andrew W Elble
61fc26e197
py-wheel: 0.35.1 ( #20713 )
2021-01-06 16:04:31 -06:00
Andrew W Elble
559c64c365
flatbuffers: python variant ( #20706 )
2021-01-06 15:59:09 -06:00
Andrew W Elble
820840d448
py-wrapt: 1.12.1 ( #20707 )
2021-01-06 15:56:59 -06:00
Andrew W Elble
8e04217672
py-opt-einsum: 3.3.0 ( #20712 )
2021-01-06 15:56:03 -06:00
Andrew W Elble
136753ccd9
py-absl-py: 0.10.0 ( #20709 )
2021-01-06 15:55:48 -06:00
Andrew W Elble
8968123dae
py-google-pasta: 0.2.0 ( #20711 )
2021-01-06 15:53:23 -06:00
Andrew W Elble
0bb495ce6f
nccl: 2.8.3-1 ( #20708 )
2021-01-06 15:47:25 -06:00
Erik Schnetter
682c31d380
qthreads: New version 1.15 ( #20704 )
2021-01-06 13:09:57 -08:00
Robert Maynard
2c04bebc32
Update kokkos amd gpu archs and required C++ level ( #20096 )
...
* Remove unsupported AMD GPU archs
* Kokkos requires C++14 now
2021-01-06 13:08:07 -08:00
Jordan Ogas
e2f2417a31
add charliecloud/0.21 ( #20703 )
2021-01-06 12:13:31 -08:00
Rémi Lacroix
4e12cab9e3
SLEPc: Set SLEPC_DIR in the module file. ( #20698 )
2021-01-06 11:05:35 -08:00
Greg Sjaardema
ac3f8656fb
SEACAS: Update to lastest version ( #20701 )
2021-01-06 10:53:45 -08:00
Frank Willmore
c3fad97487
intel-oneapi-compilers package: correct module file ( #20686 )
...
This properly sets PATH/CPATH/LIBRARY_PATH etc. to make the
Spack-generated module file for intel-oneapi-compilers useful
(without this, 'icx' would not be found after loading the module
file for intel-oneapi-compilers).
2021-01-06 10:45:42 -08:00
Robert Cohn
74a54077f5
fix mpi lib paths, add virtual provides ( #20693 )
2021-01-06 10:37:24 -08:00
Ye Luo
844d98f727
Remove hard-coded standard C++ library selection and add more releases in llvm package ( #19933 )
...
* Restore OS based Clang default choice of C++ standard library.
* Add LLVM 11.0.1 release
2021-01-06 12:17:20 -06:00
Toyohisa Kameyama
587d25ad45
parallelio: New Package. ( #20673 )
2021-01-06 10:05:43 -08:00
Dr. Christian Tacke
dabee2cee8
libc: Return empty libs ( #20338 )
...
The C-Library for the current compiler should already be used by the compiler. So there is no point in returning any libs for this package.
Without this patch: if one uses this as an external package (as intended), then this will can inject system library paths into the build process at the wrong place.
2021-01-06 10:01:07 -08:00
jkelling
8956c8c7b7
magma: remove -W args from CMakeLists.txt when using nvhpc ( #20516 )
2021-01-06 10:51:05 +01:00
Erik Schnetter
8860db4021
arrayfire: added v3.7.3 ( #20612 )
2021-01-06 10:46:02 +01:00
Rémi Lacroix
89b94d968d
libtheora: fetch a patch instead of storing it in Spack ( #20620 )
2021-01-06 10:44:05 +01:00
Rémi Lacroix
d30f9e5806
Blitz: added v1.0.2 ( #20614 )
2021-01-06 10:35:21 +01:00
Josh Essman
1cd4b134cb
mfem: link to nveccuda when +sundials+cuda ( #20588 )
2021-01-06 10:34:42 +01:00
Rémi Lacroix
c2411117f3
r-genefilter: added v1.72. ( #20627 )
2021-01-06 10:23:25 +01:00
Rémi Lacroix
83697161b4
Nek5000: Improve support for OpenMPI without legacy launchers. ( #20622 )
...
Use "srun" for the nekmpi wrapper when we know "mpiexec" won't be available.
2021-01-06 10:20:41 +01:00
Rémi Lacroix
3f40d15c84
Gromacs: simplify hwloc dependency. ( #20619 )
...
Additionaly remove the version constraint as newer versions work with OpenMPI 4.X.Y and the new experimental concretizer is now available for testing.
2021-01-06 10:19:48 +01:00
Adam J. Stewart
5aabd59335
py-scipy: add v1.6.0 ( #20637 )
2021-01-06 10:17:36 +01:00
Adam J. Stewart
4da57e8afa
GDAL: add v3.2.1 ( #20664 )
2021-01-06 10:06:32 +01:00
Tao Lin
05ab114ff9
GenFit: added new package ( #20653 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-06 09:55:49 +01:00
Brian Van Essen
385c503d8e
lbann: make catch2 a "build" and "test" dependency ( #20666 )
2021-01-06 09:53:30 +01:00
Luca Heltai
812a3fb0ae
dealii: fix concretization problem between trilinos and adol-c ( #20606 )
2021-01-06 09:51:21 +01:00
Adam J. Stewart
c247999c65
py-sphinx-rtd-theme: remove npm dependency ( #20675 )
2021-01-06 09:39:06 +01:00
Adam J. Stewart
0a69cf5936
py-numpy: add v1.19.5 ( #20684 )
2021-01-06 09:16:46 +01:00
Adam J. Stewart
323667ce2a
fakexrandr: add new package ( #20687 )
2021-01-06 08:59:12 +01:00
Adam J. Stewart
564aebdb1a
Xorg proto: type build -> link ( #20685 )
2021-01-06 08:56:22 +01:00
Desmond Orton
8d0f5c0a6f
py-picrust2: added new package ( #20455 )
2021-01-06 08:54:36 +01:00
Gregory Lee
7dbc4d32db
update stat and deps with bug fixes ( #20690 )
2021-01-06 08:36:56 +01:00
Sinan
1f2f82d388
libspatialite: added v5.0.0 ( #20293 )
...
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-01-06 08:16:25 +01:00
estewart08
7faa0a9e43
Rocm-openmp-extras 4.0 version updates ( #20692 )
2021-01-05 22:48:54 -06:00
Sreenivasa Murthy Kolam
023cb7ab7f
bump up version for rocm-4.0.0 release ( #20691 )
2021-01-05 22:25:45 -06:00
ketsubouchi
15a7723645
alps: fix for latest gcc and test bug ( #20462 )
...
* gcc build OK
* gcc mc-01 OK
* time test problem
* remove comment and debug
* use climit
* TAB to spaces
* comment
2021-01-05 22:24:50 -06:00
andymwood
35d81a9006
VTK: add -no-ipo for builds using intel compiler ( #20480 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 13:11:29 -08:00
Ethan Stam
18110346c8
Mesa: use auto when llvm is built shared ( #20683 )
2021-01-05 13:04:57 -07:00
estewart08
32c7241089
Updates and Enhancements to AOMP Recipe. Added version 3.10.0. ( #20464 )
...
* Update recipe for AOMP.
Reduced repitition with version hashes.
Expanded dependency versioning.
Reduced repitition with cmake args.
Added version 3.10.0
* Update dependency versions and remove uneeded quotes.
* Update var/spack/repos/builtin/packages/aomp/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 13:39:57 -06:00
estewart08
c55b3bf2d9
AMD ROCm 3.10 Release: Add new package recipe for rocm-openmp-extras. ( #20204 )
...
* AMD ROCm 3.9 Release: Add new package recipe for openmp-extras.
* Updated openmp-extras recipe.
Changed name to rocm-openmp-extras.
Reduced repitition with component hashes.
Adjusted the removal of CMAKE_BUILD_TYPE.
Reduced repitition in cmake args.
Added 3.10.0 to recipe.
* Update python/py-setuptools dependency versions.
* Expand dependency versions, fix the openmp cmake args.
* Remove double formats.
* Substitute escape characters with string=True for filter_file(s).
* Remove CMAKE_VERBOSE_MAKEFILE, already present in standard args.
2021-01-05 13:39:38 -06:00
Rémi Lacroix
072d21ad96
Berkeley-DB: Fix compilation with NVIDIA HPC Compilers on Red Hat 8. ( #20616 )
2021-01-05 10:45:22 -08:00
Luca Heltai
155a3b3a08
Fix compilation for boost@1.72: ( #20618 )
2021-01-05 10:42:11 -08:00
Rémi Lacroix
18d14eb765
ParaView: Allow choosing a CUDA architecture. ( #20623 )
...
This is useful when the "native" architecture cannot be guessed.
2021-01-05 10:37:00 -08:00
Harmen Stoppels
4a7c4e6667
Add cray-fftw ( #20654 )
2021-01-05 10:22:49 -08:00
Robert Cohn
a1e4465c59
compiler version format changed ( #20671 )
2021-01-05 09:37:46 -08:00
MBlaschek
4d3c9da872
Update of Eccodes to 2.19.1 ( #20368 )
...
* Update of Eccodes to 2.19.1
* PEP8
* PEP8
* PEP8-whitespace
* Update var/spack/repos/builtin/packages/eccodes/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Michael Blaschek <michael.blaschek@univie.ac.at>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-05 10:09:11 -06:00
AMD Toolchain Support
350418ec35
AOCC support for WRFv3.9.1.1 ( #20568 )
...
* AOCC support for WRFv3.9.1.1
* r' as prefix for string literal
2021-01-05 10:06:24 -06:00
Axel Huebl
e6d462589f
OpenMPI: Depends on hwlock & libevent ( #20658 )
...
* OpenMPI: Depends on hwlock & libevent
Both hwlock & libevent are required dependencies of Open MPI.
While they are also shipped internally, newer releases (>=4.0)
will start looking for external packages by default.
This caused build issues of Open MPI 4.0.5 with Fortran on macOS
10.15.
* Open MPI 4.0: libevent external
Internally shipped libevent just works fine for prior releases.
2021-01-04 21:05:11 -06:00
Jim Huang
e5b03770ed
SS2NEON transition to new repository; update headers and patch ( #20647 )
2021-01-04 18:45:47 -08:00
mic84
ad29f2148e
amrex: new version 21.01 ( #20659 )
2021-01-04 18:41:06 -08:00
Stephanie Brink
dec98ed754
py-hatchet: added latest versions up to 1.3.0 ( #20667 )
2021-01-04 18:38:44 -08:00
Peter Scheibel
22a45e010a
Bugfix: Support old installations using Cray MPICH ( #20663 )
...
#20076 moved Cray-specific MPICH support from the Spack MPICH package
to a new cray-mpich Package. This broke existing package installs
using external mpich on Cray systems. This PR keeps the cray-mpich
package but restores the Cray-specific MPICH support for older
installations.
In the future this support should be removed from the Spack mpich
package and users should be directed to use cray-mpich on Cray.
2021-01-04 17:19:08 -08:00
Sreenivasa Murthy Kolam
f4acf74091
bump up rocm math libs recipes for rocm-4.0.0 release ( #20651 )
2021-01-05 00:02:03 +01:00
Rémi Lacroix
39b77e1b39
r-codetools: Update package ( #20626 )
2021-01-04 14:46:47 -08:00
Mark W. Krentel
735d5c3769
libunwind: add version 1.5.0 ( #20632 )
...
Add version 1.5.0, remove 1.4-rc1 (use 1.4.0) and 1.5-rc1 (use 1.5.0).
2021-01-04 14:37:52 -08:00
Fabian Brandt
0c6641abd0
Update libnetworkit, py-networkit to 8.0 ( #20478 )
2021-01-04 16:14:06 -06:00
yellowhat
4dd6ba44f2
fftw: bump to 3.3.9 ( #20634 )
2021-01-04 23:01:42 +01:00
Dave Love
11dd7ffad6
Add procenv ( #20121 )
...
* Add procenv
* procenv: Only buildrequire check
* procenv: Patch for gcc 10
* procenv: Add omitted patch
* Indent doc string
2021-01-04 22:08:54 +01:00
darmac
1b33008705
libthai: new package at v0.1.28 ( #19916 )
2021-01-04 17:36:12 +01:00
Sreenivasa Murthy Kolam
c9e6a4d18b
Bumpup version for rocm 4.0.0 release ( #20640 )
2021-01-04 17:16:26 +01:00
Sreenivasa Murthy Kolam
efb1e19339
bumpup version for rocm stage1 recipes for rocm-4.0.0 release ( #20635 )
2021-01-04 17:06:44 +01:00
Rémi Lacroix
47998b3f47
Libnsl: added v1.3.0 and v1.1.0. ( #20645 )
2021-01-04 16:34:42 +01:00
Rémi Lacroix
573d2ce2e1
Plumed: added v2.7.0. ( #20646 )
2021-01-04 16:34:09 +01:00
Axel Huebl
a3fb8e55d5
openPMD-api: 0.13.0 ( #20648 )
...
Add the latest release of openPMD-api.
Remove a selection of unsupported, pre-beta releases.
2021-01-04 16:29:46 +01:00
Tomoyasu Nojiri
a5611e0466
exciting: fix build on aarch64 ( #20505 )
2021-01-04 16:26:18 +01:00
Tomoyasu Nojiri
4c23d99e7d
fdupes: Add pcre2 depend ( #20466 )
...
* fdupes: Add pcre2 depend
* fdupes: Fix depend for pcre2
2021-01-04 10:12:13 +01:00
darmac
221e680e2b
Add new package: xfsdump ( #19914 )
...
* Add new package: xfsdump
* fix Description and Homepage
2021-01-03 11:20:57 -06:00
darmac
5d1bcf67cf
Add new package: py-holland ( #19924 )
...
* Add new package: py-holland
* rename py-holland to py-holland-backup
* fix dependencies
2021-01-03 11:07:37 -06:00
Sajid Ali
d685e47fb7
bump py-h5py ( #20482 )
...
* rebase and fix merge conflict
* address reviewer comments
* rework dependency handling as per reviewer comments
* incorporate reviewer feedback
* incorporate reviewer feedback
* fix phases
* address reviewer comments
* minor
2021-01-02 17:32:36 -06:00
Todd Gamblin
a8ccb8e116
copyrights: update all files with license headers for 2021
...
- [x] add `concretize.lp`, `spack.yaml`, etc. to licensed files
- [x] update all licensed files to say 2013-2021 using
`spack license update-copyright-year`
- [x] appease mypy with some additions to package.py that needed
for oneapi.py
2021-01-02 12:12:00 -08:00
Tom Payerle
a1cf000655
hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5) ( #20274 )
...
* hdf-eos5: new package (HDF for Earth Observing Sytem using hdf v5)
* hdf-eos5: flake8 fixes
* hdf-eos5: trying to fix flake8 errors
* hdf-eos5: flake8 fix
* hdf-eos5: Fix to support Fortran codes
The -Df2cFortran compilation flag needed to support Fortran
2020-12-30 17:55:29 -06:00
Tom Payerle
a30ba0b836
hdf-eos2: new package (HDF for Earth Observing System using hdf5) ( #20275 )
...
* hdf-eos2: new package (HDF for Earth Observing System using hdf5)
* hdf-eos2: flake8 fixes
* hdf-eos2: fix to support Fortran
Need the compilation flag -Df2cFortran to allow support for Fortran
codes
2020-12-30 17:54:55 -06:00
Adam J. Stewart
0d95fd6d52
extends: add type kwarg ( #20045 )
...
* extends: add type kwarg
* Flake8 fix
2020-12-30 11:09:58 -06:00
eugeneswalker
717b653bdd
nalu-wind: add variant to build wind-utils ( #20587 )
2020-12-30 11:07:43 -06:00
Adam J. Stewart
5964cb49d9
Use system libuuid on macOS ( #20608 )
2020-12-30 10:13:34 -06:00
Adam J. Stewart
a4accff266
PythonPackage: url -> pypi ( #20610 )
...
* Convert all `url` attributes in `PythonPackage`s to `pypi` attributes
* add `pypi =` to flake8 exceptions
2020-12-29 16:44:04 -08:00
Michael Kuhn
c22141f444
Introduce virtual provider uuid ( #18322 )
...
libuuid is currently contained in util-linux, libuuid and uuid. This
change introduces a new virtual provider `uuid` and renames the existing
`uuid` package to `ossp-uuid`.
util-linux's libuuid is provided in the form of a separate package
util-linux-uuid to make sure that packages depending on uuid and
util-linux can use a separate uuid implementation, which the concretizer
does not allow if libuuid is contained in util-linux.
2020-12-29 10:12:26 -06:00
Adam J. Stewart
b421080c03
GDB: Better Python debugging support ( #20486 )
...
* GDB: Better Python debugging support
* Auto-load safe path
* Use gdbinit instead
2020-12-29 10:04:58 -06:00
Adam J. Stewart
8f92970714
py-geoplot: add new package at v0.4.1 ( #20603 )
2020-12-29 11:56:24 +01:00
Adam J. Stewart
03844b581a
OpenVSLAM: add new package ( #20389 )
2020-12-29 11:18:34 +01:00
Adam J. Stewart
50e9501124
py-contextily: add new package at v1.0.1 ( #20602 )
2020-12-29 11:17:24 +01:00
Yang Zongze
d41bb54729
automake: fix shebang substitution for v1.16.3 and later ( #20579 )
2020-12-29 11:16:34 +01:00
