Adds the latest release of libSplash (1.7.0) and newly learned
CMake flags for explicit dependency control.
Modifies HDF5 dependency: non-MPI splash does (and did) never run
with a parallel HDF5, due to it's internal cross-dependencies on
MPI.
* libdwarf: fix linker flags
* libdwarf: fix header install names
* libdwarf: add zlib dependency
Prior to this commit, libdwarf was linked to the system zlib. This
commit links it to spack-installed zlib.
* libdwarf: fix dynamic library suffix for Darwin
* Adding support for the Accelerate library on OS X
* Fixed guard on variable and added another depends_on statement to make sure that openblas gets selected even when openmp_blas variant is not turned on.
* Added a package for the MDAnalysis toolkit.
* Added some flags to fix the build RPATHs and OpenMP for LBANN on OS X.
* Fixed Hydrogen branch of Elemental to find OpenMP on OS X.
* Cleaned up JUnit report generation on install
The generation of a JUnit report was previously part of the install
command. This commit factors the logic into its own module, and uses
a template for the generation of the report.
It also improves report generation, that now can deal with multiple
specs installed at once. Finally, extending the list of supported
formats is much easier than before, as it entails just writing a
new template.
* Polished report generation + added tests for failures and errors
The generation of a JUnit report has been polished, so that the
stacktrace is correctly displayed with Jenkins JUnit plugin. Standard
error is still not used.
Added unit tests to cover for installation failures and installation
errors.
* libtool: fix linking of libtool on darwin
* binutils, libtool: fix conflicts w/ BSD tools, v2
Fix namespace conflicts with BSD tools in a more elegant fashion,
using a program prefix, similar to Homebrew.
* Tell R's configure about tcltk config
Add configure arguments that specify the location of
the tcl and tk config scripts.
Fixes#7072
* Flake8 cleanup
Looking at build logs, it seems that prior to this commit bzip2 was
using 'cc', and relying on the PATH to be set correctly to find Spack
wrappers. This commit improves the robustness of the recipe, by using
the absolute path of the wrapper.
On Darwin and other BSD systems, the system 'libtool' and 'libtoolize'
are BSD libtool and libtoolize, respectively. Some build systems
require the GNU versions of these commands, so BSD package systems
tend to name the GNU versions 'glibtool' and 'glibtoolize',
respectively, to avoid namespace collisions.
A problem with the current libtool package is that it installs the GNU
libtool commands as 'libtool' and 'libtoolize', respectively, but
build systems on BSD platforms will attempt to run 'glibtool' and
'glibtoolize'. The expedient solution to this problem is to symlink
'libtool' to 'glibtool' and 'libtoolize' to 'glibtoolize', because
attempting to patch the detection logic one build system at a time
seems impractical.
* Added new link line flag
* Refactored some of the common components out of the different
version's build commands. Also corrected the when commands to
properly capture non-numeric names such as local.
* Added support to the Elemental package for the Hydrogen branch.
