Commit graph

5622 commits

Author SHA1 Message Date
lpoirel
9d2fce4544 scotch%intel: remove restrict (#7148)
The restrict compilation option with icc causes deadlock when multithreading is used. This issue has already been reported to the Scotch development team, but for current versions it is more reliable not to use the restrict compilation option.
2018-03-21 14:22:50 -05:00
Geoffrey Oxberry
935cc30c17 librom: new package (#7180)
* libtool: actually do symlinking correctly on darwin

Version 4 of the libtool/darwin debacle:

AutotoolsPackage hardcodes libtool & libtoolize into the autoreconf
stage, so the commands `libtool` and `libtoolize` MUST be present, and
shimming in glibtoolize into AutotoolsPackage when sys.platfrom ==
'darwin' does not work.

join_path(spec['libtool'].prefix.bin, 'libtool') still shadows system
BSD libtool (in apple-cctools, see PR #7177), but this shadowing could
be okay, depending on the combination of dependent specs.

* librom: new package
2018-03-21 14:16:36 -05:00
Eric
e07ed2ab97 py-backports-functools-lru-cache: add version 1.5 (#7206)
* py-backports-functools-lru-cache: add version 1.5

* py-backports-functools-lru-cache: fix conflicts
2018-03-21 14:09:55 -05:00
Jon Rood
3d7930a379 Adding unzip package. (#7446)
* Adding unzip package.

* Removing bzip2 dependency in unzip and raising an error when on Cray.

* Fixing error.

* Using conflicts statement for Cray detection in unzip package.
2018-03-21 13:59:39 -05:00
lingnanyuan
011d407132 Xorg-server: Add dependencies and fix installation. (#7220)
* xorg-server: Add several dependencies.

* libepoxy: Add dependendies mesa and meson.

* mesa: Add dependencies for hwrender.

* mesa: undo some changes.
2018-03-21 13:53:26 -05:00
Eric Müller
647c4a1507 py-py{gobject,gtk} require pkgconfig for build (#7380) 2018-03-21 13:22:08 -05:00
scheibelp
849078e95a remove cray-specific path modifications from pkgconfig providers (now handled in cray platform) (#7406) 2018-03-21 13:20:40 -05:00
Levi Baber
29e429e525 orfm: needs zlib (#7466) 2018-03-21 12:55:47 -05:00
Eric
64f15957ce new package: perl-module-runtime (#7494) 2018-03-21 10:35:28 -07:00
peetsv
71802a57cf VMD-python v2.0.10 - new package (#7490)
* VMD-python v2.0.10 - new package

* removing extraneous comments

* flake8 error - trailing blank lines removed
2018-03-21 11:08:58 -05:00
Leonhard Reichenbach
8c9a5a95d8 Add latest version of patch (#7539) 2018-03-21 08:16:41 -05:00
健美猫
9b1d69c934 A new package: wcslib. (#7463) 2018-03-20 22:16:55 -05:00
jthies
35e7b9ac44 Ghost as cuda package (#7501)
* add headers  property to netlib-lapack and intel-mkl

* ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())

* fix flake8 errors

* ghost: remove unnecessary query parameter

* fix flake8 errors

* ghost: make it a CudaPackage (as suggested by @davydden, thanks!)

* ghost: missing whitespace
2018-03-20 11:23:45 -05:00
Denis Davydov
ed4640c75b alglib: fix on Darwin (#7534) 2018-03-20 08:33:14 -05:00
Peter Scheibel
2379ed54b9 package_hash: add code to generate a hash for a package file
This will be included in the full hash of packages.
2018-03-20 00:29:54 -07:00
Adam J. Stewart
6058cc1770 Add latest version of py-setuptools (#7523) 2018-03-20 07:18:20 +01:00
Adam J. Stewart
c11b46ae99 Add DSDP package (#7526) 2018-03-20 07:08:18 +01:00
Axel Huebl
106827db03 pocl: fix spec (#7461)
It seems there has been a change in concretization that resulted in
a request for a llvm latest (5.0.1) while not satisfying the later
more precise request for a version.

Remove the first line and only rely on the last.
2018-03-19 16:44:01 -05:00
Eric
4ea0c16f36 picard: Add version 2.18.0 (#7528) 2018-03-19 16:21:04 -05:00
Adam J. Stewart
869cb69985
Add latest version of SuiteSparse (#7525) 2018-03-19 16:19:44 -05:00
Massimiliano Culpo
c14c0d8e74
python: dbm module + version 3.6.4 (#7520)
A build of python@3.X had the following in the logs:
```
The necessary bits to build these optional modules were not found:
_dbm                  _gdbm                 _tkinter
```
As Tkinter is already a variant, we adopt the same strategy for dbm.
2018-03-19 22:19:26 +01:00
Adam J. Stewart
3874871512
Add latest version of py-six (#7524) 2018-03-19 16:19:19 -05:00
Adam J. Stewart
aea0b84e90
Add latest version of py-packaging (#7522) 2018-03-19 16:19:05 -05:00
Adam J. Stewart
a84cfb9ad4
Add latest version of GLPK (#7521) 2018-03-19 16:18:42 -05:00
Federico Ficarelli
72fae99a9e modern-wheel: new package (#7514)
#Fix imports
2018-03-19 10:43:22 -05:00
Adam J. Stewart
2e9f158a79
Add latest version of libjpeg-turbo (#7518) 2018-03-19 10:41:37 -05:00
Adam J. Stewart
9e4bd6267f
Add latest version of libjpeg (#7517) 2018-03-19 10:41:17 -05:00
Adam J. Stewart
967194ce26
Add latest version of libpng (#7516) 2018-03-19 10:40:56 -05:00
Adam J. Stewart
bb591e675c
Add latest version of nasm (#7515) 2018-03-19 08:50:02 -05:00
Massimiliano Culpo
b2822b2582
glib: updated package and fixed issues with dtrace (#7493)
fixes #6965
closes #6968
2018-03-19 06:38:42 +01:00
Jimmy Tang
ba1b3fdc9d Update the patches to work with bazel 0.9.0 (#7013)
Some code got moved around so the patches needed to be updated
2018-03-18 08:53:57 -05:00
Hans Pabst
e61b239a8a LIBXSMM 1.9 (#7495) 2018-03-17 18:29:17 -05:00
jthies
e064927fab gmp: add oldish version 5.1.3 with checksum (#7510) 2018-03-17 18:22:42 -05:00
Eric
5a04ad1273 py-multiqc: Add version 1.5 (#7506) 2018-03-17 18:22:12 -05:00
Massimiliano Culpo
49feddf71e
py-performance: added package (#7500) 2018-03-17 20:33:13 +01:00
Massimiliano Culpo
e1290b438b
hwloc: constrain dependency on numactl (#7509)
fixes #7505
2018-03-17 18:18:35 +01:00
Massimiliano Culpo
cf4b3f2af6
hwloc: updated package (#7483)
This includes:

* Added latest available versions (1.11.9, 2.0.0)
* Added variants to enable graphical output from lstopo
* Enabled build of the bundled netloc package if @2.0.0:
* Added dependency from numactl if @:1.11.9
* Added a constraint to avoid using  hwloc@2.0.0 with openmpi
2018-03-15 10:16:33 +01:00
Robert Pavel
30b8dfbeba Added Tagged Release of ExaMiniMD (#7485) 2018-03-14 18:37:21 -06:00
Michael Kuhn
423f2341bc cube: Fix qt detection (#7242)
cube's configure only recognizes qt versions with single digit version
components and breaks with qt 5.10. Patch the configure files directly
to avoid having to regenerate them.
2018-03-14 09:01:11 +01:00
Levi Baber
1cde74656b phylip: new version (#7467) 2018-03-14 08:56:15 +01:00
Sinan
e378044f16 postgresql: add newest version 10.3 (#7455) 2018-03-14 08:54:02 +01:00
Federico Ficarelli
b5879d7d07 Fix extends('tcl') environment (#7473) 2018-03-14 07:02:50 +01:00
Matthias Diener
73dd58b68a Xterm: Fix URL (#7476) 2018-03-14 06:58:42 +01:00
Kelly (KT) Thompson
86f9c9fc73 Provide new package: mscgen. (#7477)
Mscgen is a small program that parses Message Sequence Chart descriptions and
produces PNG, SVG, EPS or server side image maps (ismaps) as the output.

See http://www.mcternan.me.uk/mscgen/
2018-03-14 06:56:11 +01:00
Yifan Zhu
5bd8ec8160 r-tfbstools: new package (#7243) 2018-03-13 12:40:41 +01:00
Stephen McDowell
6f76c2124a llvm 6.0.0 released as stable (#7459)
Relase notes: http://releases.llvm.org/6.0.0/docs/ReleaseNotes.html
2018-03-13 11:34:19 +01:00
Cyrus Harrison
f8d3a0225f add an option to build tbb statically (#7407) 2018-03-13 08:08:02 +01:00
f-sim
1329f3baca Fix dependency conflict in FEniCS. (#7404) 2018-03-13 08:04:09 +01:00
Federico Ficarelli
b594f89d5e Treat tcl as extendable (#7410)
* Make tcl package extendable

* Let tk extend tcl

* Fix environment for Tcl extensions
2018-03-13 10:31:03 +09:00
Denis Davydov
a4ed76c207 arpack-ng: add develop (#7458) 2018-03-12 09:06:37 +01:00