* CGNS: Version update
The CGNS library has several new versions. There was a format-changing change in 3.4.0 which was removed for 3.4.1. The change was then added again and released with a change to the major version (4.0.0). Note that 4.0.0 should be close to the functionality of 3.4.0.
* CGNS: Add shared variant
Added the `shared`variant to make the CMake build correctly pick up the RPATH settings.
* Added a package for the DiHydrogen distributed linear algebra library.
* Updated recipe to provide cuda architecture constaints.
* Addressed reviewer comments
* Fixed flake 8
* Previous qt changes broke the openspeedshop gui build. This puts back the changes that caused the breakage.
* Update the qt version to be more robust.
Co-authored-by: Galarowicz, James <jgalarowicz@newmexicoconsortium.org>
* Add patches when building with NAG
* Make libxml2 support optional. Also include conflict for
@:3.2~hydra+libxml2 since @:3.2~hydra does not require libxml2
support
* Add '--disable-silent-rules' to get more verbose output during
the build
* Implemented working file filtering to replace spack compiler wrapper with real compiler.
* Using string=True instead of re.escape. Using self.prefix.lib instead of appending /lib.
Co-authored-by: Wyatt Spear <wspear@cs.uoregon.edu>
* Add new vecgeom versions, add cuda support, automate target options
* Add ROOT, GDML, and external VecCore support to VecGeom
* Address reviewer comments
* Update vecgeom for CUDA
* Update versions
fixes#11555
Every path in CPATH is equivalent to a -I path to the compiler,
while every path in *_INCLUDE_PATH is equivalent to -isystem.
The latter avoids the noise due to warnings coming from 3rd party
libraries that a project depends on.
Added INCLUDE env variable (Intel Fortran, .mod files)
Add a 'define_from_variant` helper function to CMake-based Spack
packages to convert package variants into CMake arguments. For
example:
args.append('-DFOO=%s' % ('ON' if '+foo' in self.spec else 'OFF'))
can be replaced with:
args.append(self.define_from_variant('foo'))
The following conversions are handled automatically:
* Flag variants will be converted to CMake booleans
* Multivalued variants will be converted to semicolon-separated strings
* Other variant values are converted to CMake string arguments
This also adds a 'define' helper method to convert any variable to
a CMake argument. It has the same conversion rules as
'define_from_variant' (but operates directly on values rather than
requiring the user to supply the name of a package variant).
* Buildcache: Install into non-default directory layouts
Store a dictionary mapping of original dependency prefixes to dependency hashes
Use the loaded spec to grab the new dependency prefixes in the new directory layout.
Map the original dependency prefixes to the new dependency prefixes using the dependency hashes.
Use the dependency prefixes map to replace original rpaths with new rpaths preserving the order.
For mach-o binaries, use the dependency prefixes map to replace the dependency library entires for libraries and executables and the replace the library id for libraries.
On Linux, patchelf is used to replace the rpaths of elf binaries.
On macOS, install_name_tool is used to replace the rpaths and dependency libraries of mach-o binaries and the id of mach-o libraries.
On Linux, macholib is used to replace the dependency libraries of mach-o binaries and the id of mach-o libraries.
Binary text with padding replacement is attempted for all binaries for the following paths:
spack layout root
spack prefix
sbang script location
dependency prefixes
package prefix
Text replacement is attempted for all text files using the paths above.
Symbolic links to the absolute path of the package install prefix are replaced, all others produce warnings.
PR #15212 added a new connect_timeout option that can be overridden
using fetch_options but had to specified per-version. This adds a new
per-package variable that can be used to override fetch_options for
all versions in the package. This includes connect_timeout as well
as 'cookie' (e.g. for the jdk package).
Packages can combine package-level fetch_options with per-version
fetch_options, in which case the version fetch_options completely
override the package-level fetch_options.
This commit includes tests for the added behavior.
