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Author SHA1 Message Date
Jimmy Tang
3511245ca4 Add abseil-cpp package (#14208) 2019-12-18 09:33:44 -06:00
Hadrien G
9583bde739 Add new DD4hep release and some forgotten build requirements (#14195) 
* Add new DD4hep release and some forgotten build requirements

* PR review suggestions

Use master naming convention for development branch, and put versions in decreasing order.
 2019-12-18 09:32:23 -06:00
Sinan
a24b973fa4 package/gdal add v2.4.3 (#14204) 2019-12-17 21:57:39 -06:00
Nathan Pinnow
60a22f1a7a Update and Fix ROSE Package (#14186) 
* rose: Update boost dependency for rose

* rose: Updated rose to version 0.9.12.45

* rose: Updated jdk dependency

* rose: Updated rose to version 0.9.13.0

* rose: Fixed formatting

* rose: Added maintainer and switch dependency to java@8
 2019-12-17 18:18:24 -06:00
Axel Huebl
5db646d768 openPMD-api: 0.10.2 (#14201) 
Add the latest release of openPMD-api, v0.10.2
 2019-12-17 18:16:26 -06:00
darmac
07f522bed6 add new package : openresty (#14169) 
* add new package : openresty

* remove rc version
 2019-12-17 14:30:19 -06:00
darmac
6a0d15a5c9 add new package : nicstat (#14173) 
* add new package : nicstat

* refine nicstat edit operation

* refine CMODEL regex expression
 2019-12-17 14:29:56 -06:00
Brian Van Essen
dc69256a59 Added package for Half C++ header-only library. (#14189) 
* Added package for Half C++ header-only library.

Fixed an checksum for Hydrogen 1.3.2.  Cleaned up the Clara package to
not create an empty bin directory.

* Fixed flake8

* Added maintainer
 2019-12-17 14:29:31 -06:00
darmac
a52df46e2c add new package : haproxy (#14160) 
* add new package : haproxy

* add url_for_version() and refine haproxy build code
 2019-12-17 12:50:10 -06:00
darmac
cd8be44f62 add new package : cosbench (#14171) 
* add new package : cosbench

* add cosbench depends and remove unstable version

* Update var/spack/repos/builtin/packages/cosbench/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/cosbench/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
 2019-12-17 12:48:27 -06:00
Sajid Ali
f657f73e94 tf verbosity to better enable debugging (#14177) 
* tf verbosity

* Add more debug flags

	modified:   var/spack/repos/builtin/packages/py-tensorflow/package.py

* Fix later

* More debug/verbose options.

	modified:   var/spack/repos/builtin/packages/py-tensorflow/package.py
 2019-12-17 12:46:34 -06:00
Shintaro Iwasaki
1a41380649 sollve: add a version 1.0a2 (#14188) 2019-12-17 12:38:32 -06:00
Yuanqi Wang
8bda848cb9 LAMMPS: Fix USER-REAXC package variant (#14192) 2019-12-17 12:35:06 -06:00
Adam J. Stewart
189eb5b883
Add py-scipy 1.4.0 (#14193) 2019-12-17 10:00:03 -06:00
t-karatsu
d831db37ca adios2: Fix use of builtin __clear_cache (#14123) 2019-12-17 08:08:22 -05:00
Todd Gamblin
a4ff92e42d mrnet: remove nonexisting cti dependency (#14178) 
MRNet had an optional dependency on `cti`, which doesn't exist.  Remove
it from the repo, at least until someone adds `cti` back.
 2019-12-16 21:03:38 -06:00
Hadrien G
e366d5b559 New ACTS version (#14180) 2019-12-16 10:25:37 -06:00
darmac
9ece934084 add new package : py-s3cmd (#14166) 
* add new package : py-s3cmd

* add some depends and move depends behind the version
 2019-12-16 10:20:15 -06:00
Peter Scheibel
60580f5871 package hash: gracefully handle @when with non-string args (#14153) 
* when constructing package hash, default to including a method in the content hash if we can't determine whether it would be included by examining the AST
* add a test for updated content-hash calculations
* refactor content hash tests to eliminate repeated lines
 2019-12-14 14:31:39 -08:00
Mark W. Krentel
410bce91d4 hpctoolkit: update git branch for version 'gpu' (#14155) 2019-12-14 12:37:04 -06:00
Brian Van Essen
34128ca70d Updated Hydrogen version to 1.3.2 (#14156) 2019-12-14 12:36:33 -06:00
darmac
5e9fb6b309 add new package : memcached (#14162) 2019-12-14 12:28:51 -06:00
darmac
986df8c233 add new package : jstorm (#14163) 2019-12-14 12:27:39 -06:00
darmac
0f0e2c4397 add new package : logstash (#14164) 2019-12-14 12:26:43 -06:00
darmac
72390ecd62 add new package : pig (#14165) 2019-12-14 12:26:14 -06:00
darmac
43712b4982 add new package : rabbitmq (#14167) 2019-12-14 12:21:09 -06:00
darmac
2f4521d418 add new package : zookeeper (#14170) 2019-12-14 12:19:40 -06:00
darmac
f40520c6bf add new package : bind9 (#14172) 2019-12-14 12:16:39 -06:00
darmac
33028c8955 add new package : rt-tests (#14174) 2019-12-14 12:12:01 -06:00
Andras Wacha
f757b6f4e5 Patch: explicitly use xbitmaps include dir in the automake package (#14128) 
* Patch: explicitly use xbitmaps include dir in the automake package

* Added dependencies required for autoreconf: libtool, autoconf, automake, m4
 2019-12-14 10:54:27 -06:00
darmac
7e668b1153 add new package : cassandra (#14144) 
* add new package : cassandra

* make stable version as a preferred one
 2019-12-13 22:21:18 -06:00
Adam J. Stewart
43e9fe95ea
Add latest version of jq (#14134) 2019-12-13 15:44:09 -06:00
Matthieu Dorier
f589f69a6c FIX: Making berkeley-db package fetch from correct links (#14147) 
* making berkeley-db package fetch from oracle website

* removed blank space

* making flake8 happy

* fixing typos and order of versions
 2019-12-13 15:19:59 -06:00
Dan Lipsa
0167ceb104 Add shared option to ParaView. (#14131) 
* Add shared option to ParaView.

* Use append for one attribute
 2019-12-13 15:19:31 -06:00
Adam J. Stewart
83baf35246
Add new aws-parallelcluster package (#14139) 2019-12-13 12:55:15 -06:00
Adam J. Stewart
268914e7a2
Add latest version of py-tabulate (#14138) 2019-12-13 12:54:59 -06:00
Adam J. Stewart
988b377382
Add latest version of py-ipaddress (#14137) 2019-12-13 12:54:42 -06:00
Adam J. Stewart
da501564cb
Add latest version of py-botocore (#14136) 2019-12-13 12:54:23 -06:00
Adam J. Stewart
5db615feca
Add latest version of py-boto3 (#14135) 2019-12-13 12:54:05 -06:00
Adam J. Stewart
2e19a9343b
Add latest version of oniguruma (#14133) 2019-12-13 12:53:44 -06:00
Seth R. Johnson
c659408368 Update CMake to version 3.16 (#14152) 2019-12-13 12:53:19 -06:00
noguchi-k
3e5c926a95 gmodel: fix error (#14140) 2019-12-13 12:53:03 -06:00
darmac
481a920fe8 add new package : activemq (#14142) 2019-12-13 12:51:59 -06:00
darmac
3344bb0a96 add new package : alluxio (#14143) 2019-12-13 12:51:30 -06:00
darmac
03203a86b4 fix libev url (#14066) 
* fix libev url

* remove list_url in libev
 2019-12-12 22:58:33 -06:00
Sinan
0d7b9de3be compile python with sqlite loadable extensions (#14132) 2019-12-12 22:58:16 -06:00
t-karatsu
ddfca1b2f2 cmake: Fix checksum of 4075.patch (#14125) 2019-12-12 13:57:23 -05:00
iarspider
d98b433a3c Fix py-jupyter-client version ranges (#14126) 2019-12-12 11:31:47 -06:00
Justin S
c2f45fb4da charmpp: fix build failing from broken hardlink (#13922) 
* charmpp: fix build failing from broken hardlink

* charmpp: use setup_dependent_build_environment
 2019-12-11 20:20:05 -06:00
Glenn Johnson
fec3a852c7 Fix replacement of embedded 'gcc' in augustus (#14116) 
PR #13975 added makefile filtering to replace gcc/g++ with the spack
compiler. This conflicts with other filtering that is done in the package to
add paths for dependencies. The text of the dependency paths might
have 'gcc' in the path name, depending on the install_path_scheme, and
that was being replaced by the new compiler filters. That would mangle
the path to the dependecy resulting in a failed build.

This PR moves the compiler filters to be before the other filters to
make sure that the compiler is set before the dependency paths.
 2019-12-11 20:19:27 -06:00
iarspider
695c09a8b7 Add missing dependency on setuptools to py-subprocess32 (#14074) 
* Add missing dependency on setuptools to py-subprocess32

* Update package.py

* Update var/spack/repos/builtin/packages/py-subprocess32/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py
 2019-12-11 20:18:39 -06:00
Brian Van Essen
53f73e280a Bugfix for bad hydrogen tags (#14119) 2019-12-11 20:17:10 -06:00
Adam J. Stewart
1f9d37c346
TensorFlow: must specify CUDA compute capabilities (#14118) 
* TensorFlow: must specify CUDA compute capabilities

* Correctly restrict cuda_arch version ranges
 2019-12-11 20:16:52 -06:00
Adam J. Stewart
7ec1917d9b
Add try-except for Python installation (#14122) 2019-12-11 20:16:33 -06:00
Adam J. Stewart
47615566ea
Fix JDK 8 download URLs (#14120) 2019-12-11 20:16:16 -06:00
iarspider
aac45154fd Fix py-ppft source extension (#14077) 
* Fix py-ppft source extension

* PEP-8 fix

* Update package.py

* Apply suggestions from code review

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
 2019-12-11 14:05:14 -06:00
iarspider
d07e988fbc Fix py-pox build recipe (#14078) 
* Fix py-pox build recipe

* PEP-8 fix

* Update package.py

* Apply suggestions from code review

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
 2019-12-11 14:04:50 -06:00
iarspider
a254f7011e Fix py-notebook for Python2 (#14079) 
* Fix py-notebook for Python2

* PEP-8 fix

* Update package.py

* Update package.py

* Syntax fix

* Update var/spack/repos/builtin/packages/py-notebook/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
 2019-12-11 14:04:33 -06:00
iarspider
34adebc7cf Fix py-hypothesis (#14084) 
* Fix py-hypothesis

* Update package.py

* Update package.py

* Update package.py
 2019-12-11 14:04:18 -06:00
Dan Lipsa
6f7a58b142 Fix constexpr for llvm 9.0 (#14095) 2019-12-11 14:03:57 -06:00
Adam J. Stewart
69a91b5b6b
Add grass 7.8.2 (#14115) 2019-12-11 14:00:38 -06:00
Brian Van Essen
ee0b9bfa5b Added new versions of hydrogen (#14103) 2019-12-11 12:23:25 -06:00
Michael Kuhn
927f496306 doxygen: Fix libiconv checks (#14106) 
PR #10589 introduced a libiconv dependency to doxygen. This causes
problems on Linux systems, since the iconv symbols are included in libc,
which causes CMake to use the external header but not the external
library. Work around this by always using the external libiconv.
 2019-12-11 12:22:59 -06:00
Glenn Johnson
f2979da2af Build xed CLI for the intel-xed package (#14114) 
The xed CLI is handy, and can be gotten by building the examples in the
intel-xed package. This PR builds the examples and installs the xed CLI.
It would also be possible to install more of the example binaries if
someone thinks they are useful.
 2019-12-11 12:13:27 -06:00
Mark Olesen
77482e102a openfoam relocated to https://develop.openfoam.com/Development/openfoam.git (#14101) 2019-12-11 12:12:30 -06:00
noguchi-k
b0a7c8487d diamond: fix narrowing error. (#14064) 
* diamond: fix narrowing error

* diamond: fix patch

* diamond: add link to the patch source
 2019-12-11 12:07:21 -06:00
iarspider
d4326038b9 Fix py-pkgconfig recipe (#14081) 
* Fix py-pkgconfig recipe

* Update package.py

* Proper fix for py-pkgconfig
 2019-12-11 12:06:18 -06:00
iarspider
bb3bae4bae Fix py-pathos source file extension (#14080) 
* Fix py-pathos source file extension

* PEP-8 fix

* Add version 0.2.3 to spack

* Update package.py
 2019-12-11 12:04:45 -06:00
iarspider
ec3d979899 Fix py-llvmlite (#14083) 
* Fix py-llvmlite

* Update package.py

* Add llvmlite 0.29

* Update package.py
 2019-12-11 12:03:48 -06:00
iarspider
5c2afd0535 Fix py-dill source archive extension (#14085) 
* Fix py-dill source archive extension

* Add py-dill 0.2.7, remove extra str()

* Update package.py

* Update package.py

* Update package.py
 2019-12-11 12:03:28 -06:00
Howard Pritchard
e7a03d07b6 llvm: fix for building llvm using Cray PE (#12734) 
Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
 2019-12-11 11:51:44 -06:00
iarspider
3cd6ca02d2 Fix json-c package (#14087) 
* Fix json-c package

* Fix PEP-8

* Update package.py

* Update package.py
 2019-12-10 17:34:50 -06:00
iarspider
ec060f3d9c Fix libgeotiff dependency of gdal (#14089) 
* Fix libgeotiff dependency of gdal

* Update package.py

* Fix typo

* Update package.py
 2019-12-10 17:34:35 -06:00
Justin S
2c31776007 openmolcas: new package at 19.11 (#14099) 
* openmolcas: new package at 19.11

* openmolcas: fill description

* openmolcas: rewrite using CMakePackage

* openmolcas: add py-six dep

* openmolcas: use setup_build_environment, setup_run_environment

* openmolcas: remove redundant cmake dep

* openmolcas: explicitly cast Executable to str
 2019-12-10 17:33:52 -06:00
iarspider
5b3b522861 Alternative locations for tclConfig and tkConfig (#14071) 
* Alternative locations for tclConfig and tkConfig

* Fix PEP-8
 2019-12-10 15:18:19 -06:00
Eric Berquist
33f603734d Update tmux to 3.0a (#14096) 
* Add tmux@2.9 and tmux@3.0a

* Fix checksums
 2019-12-10 15:06:21 -06:00
Christoph Junghans
34f0195de8 gromacs-2018.8: fix checksum (#14069) 2019-12-10 12:33:41 -06:00
iarspider
fb6d29adfa ROOT: +http variant doesn't require any external dependency (#14072) 2019-12-10 12:29:11 -06:00
iarspider
f96216cf40 Fix py-pyasn1 version for py-pyasn1-modules (#14076) 2019-12-10 12:26:16 -06:00
iarspider
122264609e Fix for DD4Hep build: can't find boost (#14091) 2019-12-10 11:58:52 -06:00
iarspider
dd67868ef6 More variants for cairo (#14092) 2019-12-10 11:58:37 -06:00
Simo Tuomisto
9e8204d075 openfoam-org: Adding openfoam-org versions 6 and 7. (#12859) 
This commit adds openfoam-org versions 6 and 7. It also adding new variant for metis and fixes openfoam-org's old environment modification functions.
 2019-12-10 09:42:01 -06:00
Mark W. Krentel
c627e5a6fc intel-tbb: fix and cleanup patch version ranges (#14053) 
Recent commit e9ee9eaf (#13989) fixed testing version ranges inside
patch when clauses.  Previously, it was necessary to write all revs
individually for packages with multiple length version numbers (2019
and 2019.1).

This fixes the build for the old 2017.* versions.
 2019-12-09 17:11:47 -06:00
Adam J. Stewart
23faffa2d0
TensorFlow: don't override HOME env var (#14054) 2019-12-09 11:22:57 -06:00
Matt Larsen
919a5421b7 fix incorrect gpu arch map for vtk-m package (#14057) 2019-12-09 11:18:51 -06:00
Adam J. Stewart
aa8d5d2e8c
cbtf-krell: fix missing dependencies (#14021) 2019-12-08 15:51:04 -06:00
Adam J. Stewart
2266aab5c5
Add new r-condop package (#14050) 2019-12-08 09:29:51 -06:00
Adam J. Stewart
c72568d01b
Add new r-earth package (#14049) 2019-12-08 09:06:53 -06:00
Adam J. Stewart
bf9661f18a
Add new r-plotmo package (#14048) 2019-12-08 09:06:37 -06:00
Adam J. Stewart
0c1599403d
Add new r-teachingdemos package (#14047) 2019-12-08 09:06:20 -06:00
Adam J. Stewart
cb258daf88
Add new r-graphlayouts package (#14046) 2019-12-08 09:06:04 -06:00
Adam J. Stewart
4593b7b693
Add new r-tidygraph package (#14045) 2019-12-08 09:05:46 -06:00
Adam J. Stewart
3547776921
py-torch: comment out non-existing deps (#14044) 2019-12-08 09:05:21 -06:00
Adam J. Stewart
aca67581e8
Add new py-requests-mock package (#14043) 2019-12-08 09:05:04 -06:00
Adam J. Stewart
99d2bcf64e
py-luigi: fix test dependencies (#14042) 2019-12-08 09:04:45 -06:00
Christoph Junghans
16a61d1422 elpa: port to microarch (#13655) 
* elpa: port to microarch

* flake8

* Update package.py

* Update var/spack/repos/builtin/packages/elpa/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
 2019-12-08 09:03:59 -06:00
Adam J. Stewart
4e24c4ca5f
Add new py-pytest-mypy package (#14041) 2019-12-08 00:10:46 -06:00
Adam J. Stewart
4fb03f7222
Add new py-sphinxcontrib-issuetracker package (#14040) 2019-12-08 00:10:32 -06:00
Adam J. Stewart
8d21e39f00
py-python-htmlgen -> py-htmlgen (#14039) 2019-12-08 00:10:17 -06:00
Adam J. Stewart
fdc3176920
Add new py-asserts package (#14038) 2019-12-08 00:10:02 -06:00