iarspider
5d9c17d2bf
popt: depend on virtual iconv package ( #21645 )
2021-02-12 10:58:20 +00:00
AMD Toolchain Support
b53bf7cefd
xpmem: Added RHEL 8.3 support ( #21563 )
2021-02-12 11:01:55 +01:00
Cyrus Harrison
13852986a4
conduit: add v0.7.1 ( #21639 )
2021-02-12 10:35:14 +01:00
Ryan S. Elliott
f92580240e
Add support for KIM package in LAMMPS ( #21638 )
2021-02-11 19:10:45 -07:00
Tom Epperly
58b9c6dadd
Fix mumps compilation with gcc@10 (i.e., gfortran) ( #21631 )
...
* add new flag when compiling mumps with %gcc@10.
* Fix style
* Try to fix formatting
* Use flag_handler approach suggested by @michaelkuhn
in the PR review.
* Delete former approach
* Another style issue
* Add another space
* More fixes
2021-02-12 01:14:09 +00:00
Daryl W. Grunau
0724467ad2
caliper: version upgrade to 2.5.0 ( #21606 )
...
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2021-02-11 20:34:22 +01:00
Dr. Christian Tacke
437d92155d
mesa18: Do not deprecate for now ( #21627 )
...
We still need mesa18 for some of our builds.
Those builds require python@2, normal mesa only works with
python@3.
* Remove the deprecation tag
* Add myself as a maintainer: I volunteer to help with this
package for the time being.
* There is only one version, no need to prefer it.
2021-02-11 19:12:38 +00:00
Jen Herting
0dcb0d885f
[py-py4j] added version 0.10.9 ( #21625 )
2021-02-11 18:16:38 +00:00
Jen Herting
f7a05e0c61
[py-pyspark] new version and limited python for old versions ( #21602 )
...
* fixed install with ver 3 and python 3.0
* replaced @3 with @2.999
* [py-pyspark] added version requirements for py-py4j
* [py-pyspark] all versions require at least version 2.7 of python
* [py-pyspark] fixed comma syntax
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-02-11 11:16:29 -06:00
vvolkl
3d6e9e172d
genfit: set the ROOT prefix when building genfit ( #21589 )
...
Co-authored-by: lintao <lintao51@gmail.com>
2021-02-11 17:03:20 +01:00
Harmen Stoppels
f255c3eb76
libxc: add v5.1.0 ( #21593 )
2021-02-11 17:01:21 +01:00
Harmen Stoppels
882b8f9d42
spglib: add versions up to v1.16.1 ( #21624 )
2021-02-11 15:58:15 +00:00
Michael Kuhn
91d2c4f7db
meson: add 0.56.2 ( #21608 )
2021-02-11 16:46:01 +01:00
Erik Schnetter
7f003a77dd
nsimd: add v2.1 ( #21623 )
...
Updated variants and conflicts accordingly
2021-02-11 15:41:46 +00:00
Michael Kuhn
3268cf4b96
libfyaml: new package ( #21604 )
2021-02-11 16:41:16 +01:00
Michael Kuhn
ef5b15be40
libcyaml: new package ( #21598 )
2021-02-11 16:40:28 +01:00
Michael Kuhn
da46da1c2a
libyaml: add 0.2.5 ( #21597 )
2021-02-11 16:40:06 +01:00
Chuck Atkins
a57598defe
doxygen: fix gcc getting stuck in an infinite loop ( #21614 )
2021-02-11 16:35:51 +01:00
Michael Kuhn
e2084ea6fd
glib: add 2.66.6 ( #21605 )
2021-02-11 16:27:57 +01:00
M. Eric Irrgang
dea9334189
Apply compiler filters to GROMACS installation. ( #21621 )
...
The GROMACS package embeds references to its build tool chain.
Use the Spack utilities to make sure these references are correct
outside of the isolated Spack build environment.
2021-02-11 14:52:32 +00:00
victorusu
fd8eac7052
Add sanity checks to reframe recipe ( #21622 )
2021-02-11 15:35:57 +01:00
victorusu
2fbc8caf86
pygelf: add v0.4.0 ( #21620 )
2021-02-11 15:23:55 +01:00
M. Eric Irrgang
944cb5dec6
Update GROMACS package ( #21617 )
...
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-02-11 15:16:27 +01:00
Michael Kuhn
fc00944900
meson: remove cmake dependency ( #21607 )
...
cmake was added as a runtime dependency to meson in #20449 . This
introduces an unnecessary implicit cmake dependency, which increases
build time for meson considerably. cmake is only one of many methods for
finding dependencies (pkg-config, qmake etc.), which are also not
runtime dependencies of meson. Add cmake as a build dependency to mesa
instead.
2021-02-10 23:46:52 -05:00
Axel Huebl
48af2ac8f9
adios2: Add 2.7.1 release ( #21584 )
...
Add the latest release of ADIOS2.
2021-02-10 23:44:42 -05:00
Jen Herting
5828a2cd31
[py-chalice] py-typing causes issues with python >= 3.5 ( #21202 )
...
* [py-chalice] py-typing causes issues with python >= 3.5
* [py-chalice] changed upperbound on typing
2021-02-10 21:31:02 +00:00
eugeneswalker
e15a3438a8
ascent: add version v0.6.0 ( #21573 )
2021-02-10 10:14:16 -08:00
a-saitoh-fj
24dd5d12a5
py-llvmlite: Changing build options when using the FUJITSU compiler ( #21585 )
2021-02-10 09:58:10 -06:00
vvolkl
08972014f8
[py-uproot4] add new versions ( #21588 )
2021-02-10 09:57:10 -06:00
a-saitoh-fj
bd836540f2
New package: py-dask-sphinx-theme ( #21582 )
2021-02-10 10:22:03 +01:00
a-saitoh-fj
cf9a7bc7f6
pandoc modified:package.py ( #21581 )
2021-02-10 10:20:47 +01:00
h-denpo
7d48bbfd3a
raxml-ng: Fixed typo: ( #21580 )
2021-02-10 10:17:28 +01:00
Matt Schramm
175d614bc6
Update package.py ( #21577 )
2021-02-10 10:16:22 +01:00
Shintaro Iwasaki
ca6ec59a86
sollve: deprecate the sollve package ( #21578 )
2021-02-10 01:49:20 +00:00
Jen Herting
a938cc512b
New package: py-moviepy ( #20751 )
...
* [py-moviepy] created template
* [py-moviepy] added dependencies
* [py-moviepy] removed fixmes, added homepage and description
* [py-moviepy] updated to pypi and updated checksum
* [py-moviepy] added setuptools dependency
* [py-moviepy] more specific version limit
* [py-moviepy] added checksum for version 1.0.1
* [py-moviepy] numpy restriction not nesessary here
2021-02-09 23:18:51 +00:00
kean-smullen-nnl
32056da93b
New Package: py-xgboost ( #21470 )
...
* new python package py-xgboost added
* py-xgboost spack style applied
* py-xgboost: Addressing PR #21470 comments. Added variant descriptions and fixed scikit-learn when clause
2021-02-09 23:12:20 +00:00
Satish Balay
42e8a64660
xsdk: update petsc4py, strumpack dependencies ( #21569 )
2021-02-10 00:10:09 +01:00
Adam J. Stewart
d580ac302d
3DTK: add new package ( #20931 )
...
* 3DTK: add new package
* Add missing opencv variants
Co-authored-by: Michael Kuhn <michael@ikkoku.de>
* Fix cmake version req, add eigen dep
* Prefer trunk version
* Tell 3dtk where to find eigen
* Fix installation
* Fix installation
Co-authored-by: Michael Kuhn <michael@ikkoku.de>
2021-02-09 16:45:41 -06:00
Ethan Stam
865d38afa7
ParaView, LLVM: add -shared-intel to solve intel linking failures ( #18195 )
2021-02-09 23:26:49 +01:00
Desmond Orton
2697c73097
New Package r-reproducible ( #21434 )
2021-02-09 14:11:14 -08:00
Glenn Johnson
d01edbb48e
Fix groff build with long interpeter line ( #21549 )
...
This PR fixes the case where groff fails to build if the spack install
path is really long. There are a couple of perl scripts that get built,
and used, during the build phase that will fail when the perl
interpreter line is too long. Filtering the lines will not work because
the files don not exist after the configure phase and patching after the
build phase is too late. This PR runs the scripts explicitly with the
spack perl via the $(PERL) variable in the call to the script.
2021-02-09 13:54:51 -08:00
Glenn Johnson
f7a9fbc688
Update the Spack R BioConductor packages to Bioconductor-3.12 ( #21575 )
2021-02-09 15:35:30 -06:00
takanori-ihara
fe863b68b2
biobambam2: Add test method and test scripts. ( #21504 )
...
Co-Authored-By: Tamara Dahlgren <dahlgren1@llnl.gov>
2021-02-09 12:33:55 -08:00
Jordan Ogas
02a4abadfa
add charliecloud 0.22 ( #21574 )
2021-02-09 12:15:03 -08:00
Dr. Christian Tacke
11711fcbe5
root: 6.22.04 works with xrootd 5 ( #21572 )
...
ROOT version 6.22.04 has been ported to support xrootd 5.
So let's support that.
See: https://github.com/root-project/root/commit/a33b156e3bf809343eda08150666154a
2021-02-09 11:33:14 -08:00
Evan Bollig
cc6d055786
Relion 3.1.1 patch for Ubuntu18.04 ( #21556 )
2021-02-09 11:07:06 -08:00
Cyrus Harrison
533d4bbc3c
add conduit 0.7.0 release ( #21558 )
2021-02-09 11:02:30 -08:00
Adam J. Stewart
7ccb9992a6
Procedure to deprecate old versions of software ( #20767 )
...
* Procedure to deprecate old versions of software
* Add documentation
* Fix bug in logic
* Update tab completion
* Deprecate legacy packages
* Deprecate old mxnet as well
* More explicit docs
2021-02-09 13:51:18 -05:00
Toyohisa Kameyama
b802e75274
penblas: fix link error in dependent packages. ( #21561 )
2021-02-09 09:53:09 -08:00
Harmen Stoppels
0760c7c704
Add more cmake patch releases ( #21562 )
2021-02-09 09:48:34 -08:00
Adam J. Stewart
341eec8dfb
py-pandas: add v1.2.2 ( #21568 )
2021-02-09 09:32:58 -08:00
Shintaro Iwasaki
3c874e22b5
bolt: add new versions ( #21550 )
2021-02-09 09:43:12 +01:00
Sreenivasa Murthy Kolam
bff4469d8f
replace libelf with elfutils in hip-rocclr ( #21421 )
2021-02-09 08:21:05 +01:00
Jen Herting
58f3d0986d
New package: py-msgpack-numpy ( #21548 )
...
* [py-msgpack-numpy] created template
* [py-msgpack-numpy] added dependencies
* [py-msgpack-numpy] added homepage and description. removed fixmes. fixed copyright date
* [py-msgpack-numpy] url -> pypi
2021-02-08 21:20:07 +00:00
Andrew W Elble
dc1a05d273
py-tensorflow-estimator: update for 2.4.0 ( #21546 )
...
* py-tensorflow-estimator: update for 2.4.0
* build/run deptypes, switch to common tmpfile logic
2021-02-08 21:14:20 +00:00
Andrew W Elble
7fd8b775ad
py-tensorboard: add new versions ( #21545 )
2021-02-08 14:38:09 -06:00
ketsubouchi
0e3b12776c
xforms: new package ( #21535 )
2021-02-08 12:27:36 -08:00
Jen Herting
843e1993ae
New package: py-imageio-ffmpeg ( #20749 )
...
* [py-imageio-ffmpeg] created template
* [py-imageio-ffmpeg] added dependencies
* [py-imageio-ffmpeg] added runtime dependency
* [py-imageio-ffmpeg] removed fixmes, added homepage and description
* [py-imageio-ffmpeg] url -> pypi and updated checksum
2021-02-08 13:30:45 -06:00
AMD Toolchain Support
fc374febf2
amdtoolchain support for openfoam ( #21536 )
2021-02-08 13:22:59 -06:00
Sergei Shudler
6447ec6ff5
Smoke test for parallel-netcdf package ( #21400 )
2021-02-08 11:21:52 -08:00
Satish Balay
c01065ee73
petsc: update to version 3.14.4, and petsc4py to 3.14.1 ( #21544 )
2021-02-08 13:05:52 -06:00
Pieter Ghysels
b37c601a01
Strumpack slate variant ( #21542 )
...
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-02-08 18:27:41 +00:00
Toyohisa Kameyama
512c8a1f1a
ldak: build only x86_64 linux. ( #21414 )
2021-02-08 10:22:47 -08:00
Howard Pritchard
45040589c8
paraview: disable VTK_PYTHON_OPTIONAL_LINK for cce ( #21357 )
...
when building paraview 5.8 or newer.
See https://gitlab.kitware.com/vtk/vtk/-/merge_requests/7482for background info.
Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2021-02-08 09:53:06 -08:00
Satish Balay
66dc7d8c53
petsc4py: workaround LDSHARED change in 3cc5b7adc7 ( #21541 )
2021-02-08 11:43:46 -06:00
victorusu
9d8b8553f1
Add ReFrame 3.4 ( #21540 )
2021-02-08 17:00:12 +01:00
Andrew-Dunning-NNL
aba9207254
py-dvc: new package ( #21516 )
...
* py-dvc: new package
* Update var/spack/repos/builtin/packages/py-dvc/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-dvc: add version dependency for py-networkx
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-02-08 09:54:28 -06:00
AMD Toolchain Support
9eb5c8f843
cp2k: added support for AMD toolchain ( #21371 )
2021-02-08 11:03:56 +01:00
Tomoyasu Nojiri
83f7541420
libqglviewer: add dependency on glu ( #21438 )
2021-02-08 10:55:56 +01:00
Tomoyasu Nojiri
b760dbc502
pangolin: add dependency on glu ( #21439 )
2021-02-08 10:46:24 +01:00
lpoirel
aa86523aaa
mumps: don't put absolute path in soname ( #21247 )
2021-02-08 10:30:27 +01:00
Adam J. Stewart
824f6ad3f4
py-matplotlib: clarify backend variant description ( #21520 )
2021-02-08 09:36:35 +01:00
Adam J. Stewart
8a2fc484fa
py-fiscalyear: add v0.3.1 ( #21523 )
2021-02-08 09:30:50 +01:00
Adam J. Stewart
480e4f0b4c
py-numpy: add v1.20.1 ( #21525 )
2021-02-08 09:27:31 +01:00
darmac
f4f2647134
libproxy: add v0.4.17 ( #21526 )
...
Added dependency on Python and zlib
2021-02-08 09:25:10 +01:00
darmac
1bee682d67
pciutils: add a PREFIX parameter to make invocation ( #21527 )
2021-02-08 09:22:55 +01:00
darmac
ca24b6c740
bird: add build dependencies ( #21528 )
2021-02-08 09:20:48 +01:00
Desmond Orton
de99535f9a
Package/r require and subpackage dep fix ( #21433 )
2021-02-07 13:48:14 -06:00
Sreenivasa Murthy Kolam
fef79b7e9b
fix build failure with boost-1.58.0 by using higher revision ( #21376 )
2021-02-07 13:32:59 +01:00
Mark Abraham
9414b11490
Clarify GROMACS relaxed double option ( #21510 )
...
* Clarify relaxed double precision option
This is only intended for use on the Fujitsu PRIMEHPC platform
* Fix typo
* Shorten line to keep linter happy
2021-02-07 05:29:53 -07:00
Richarda Butler
5f75221522
Bugfix: Install font-util ( #20179 )
...
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Greg Becker <becker33@llnl.gov>
2021-02-07 12:52:07 +01:00
m-shunji
6e29a36d88
mpas-model: add a necessary resource ( #21478 )
2021-02-07 12:47:54 +01:00
Aurelien Bouteiller
eb3338ed1b
Parsec: new release ( #21481 )
2021-02-07 12:47:20 +01:00
Hanqi Guo
4f73dff204
adding new package FTK (the feature tracking kit) ( #21493 )
2021-02-07 12:46:08 +01:00
Robert Pavel
3387cefe1e
Fixed xsbench~mpi Spec ( #21498 )
2021-02-07 12:45:43 +01:00
Christoph Junghans
d5953d75bf
libecpint: add v1.0.5 ( #21502 )
2021-02-07 12:44:23 +01:00
Adam J. Stewart
f37ffbe932
py-xarray: fix smoke tests ( #21503 )
2021-02-07 12:43:40 +01:00
marvinbernhardt
d58ed20239
handle other architectures than Intel ( #21509 )
2021-02-07 12:37:56 +01:00
Robert Pavel
d630d63755
Added Conflict for macsio@1.1 ~mpi ( #21513 )
...
Added conflict for macsio@1.1~mpi after investigating source code. As of
1.1 tag macsio does not properly guard out MPI commands. This is
verified as corrected in @develop
2021-02-07 12:34:00 +01:00
Filippo Spiga
7d371e5b55
Adding NVIDIA HPC SDK 21.1 ( #21514 )
2021-02-07 12:33:08 +01:00
Robert Pavel
35b5d37f10
Fixed Typo in Examinimd Spackage ( #21515 )
2021-02-07 12:29:24 +01:00
darmac
adb350c23c
collectd: add test dependency ( #21522 )
2021-02-07 12:28:49 +01:00
Phil Carns
b54e9b0b31
mercury variant to control checksumming feature ( #21467 )
2021-02-07 12:26:49 +01:00
Adam Moody
121e55832a
mpifileutils: add v0.11 ( #21432 )
2021-02-07 12:18:42 +01:00
darmac
7bfb4a2d7d
gobject-introspection: enable gobject option in cairo ( #21404 )
2021-02-07 12:09:20 +01:00
kkauder
1b9be33f84
Removed boost dependence and other outdated bits ( #21394 )
2021-02-07 12:06:59 +01:00
darmac
7b38221798
aspcud: update version to fix build error ( #21521 )
2021-02-07 11:55:37 +01:00
darmac
7020c86874
r-rmariadb: add mariadb library path ( #21406 )
2021-02-07 02:49:42 +00:00
eugeneswalker
f3f8a72bbd
trilinos: @develop requires cxxstd>=14 ( #21519 )
2021-02-06 13:24:30 -05:00
Jean-Paul Pelteret
a544030517
Add package: py-fava ( #21275 )
...
* Add package: py-beancount-fava
* Rename package; fixes
* Fixes
* Cleanup; simplify regex used to ignore files
2021-02-05 21:12:29 +00:00
