Lately many CI runs for PRs are failing due to the `mpich` build that
times out on Travis (10 mins. without output). As the timeout seems to
happen consistently during the build phase, increasing the verbosity of
that test can help working around the issue.
- `spack env create <name>` works as before
- `spack env create <path>` now works as well -- environments can be
created in their own directories outside of Spack.
- `spack install` will look for a `spack.yaml` file in the current
directory, and will install the entire project from the environment
- The Environment class has been refactored so that it does not depend on
the internal Spack environment root; it just takes a path and operates
on an environment in that path (so internal and external envs are
handled the same)
- The named environment interface has been hoisted to the
spack.environment module level.
- env.yaml is now spack.yaml in all places. It was easier to go with one
name for these files than to try to handle logic for both env.yaml and
spack.yaml.
- `spack env activate foo`: sets SPACK_ENV to the current active env name
- `spack env deactivate`: unsets SPACK_ENV, deactivates the environment
- added support to setup_env.sh and setup_env.csh
- other env commands work properly with SPACK_ENV, as with an environment
arguments.
- command-line --env arguments take precedence over the active
environment, if given.
setup-env includes a call to 'ps' to determine what shell is being
used. 'ps' can be instructed to use a different default output format
via the 'PS_FORMAT' env variable. Thus unset this variable before
calling 'ps'.
* Unite Dockerfiles - add build/run/push scripts
* update docker documentation
* update .travis.yml
* switch to using a preprocessor on Dockerfiles
* skip building docker images on pull requests
* update files with copyright info
* tweak when travis builds for docker files are done
- `spack license list-files`: list all files that should have license headers
- `spack license list-lgpl`: list files still under LGPL-2.1
- `spack license verify`: check that license headers are correct
- Added `spack license verify` to style tests
- remove the old LGPL license headers from all files in Spack
- add SPDX headers to all files
- core and most packages are (Apache-2.0 OR MIT)
- a very small number of remaining packages are LGPL-2.1-only
- Many container builds are timing out frequently during Spack tests in
Travis CI.
- Travis recommends to try `sudo: required` to see whether this is an
infrastructure issue or something else.
- added `sudo: required` to all Linux builds.
- added --verbose to `spack test` invocation so that we can see more
easily what tests it's timing out on.
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
As requested in the review all the commands meant to manage module
files have been grouped under the `spack module` command.
Unit tests have been refactored to match the new command structure.
fixes#2215fixes#2570fixes#6676fixes#7281closes#3827
This PR reverts the use of `spack module loads` in favor of
`spack module find` when loading module files via Spack. After this PR
`spack load` will accept a single spec at a time, and will be able
to interpret correctly the `--dependencies` option.
- The setup-env.sh script currently makes two calls to spack, but it
should only need to make one.
- Add a fast-path shell setup routine in `main.py` to allow the shell
setup to happen in a single, fast call that doesn't load more than it
needs to.
- This simplifies setup code, as it has to eval what Spack prints
- TODO: consider eventually making the whole setup script the output of a
spack command
- replace `spack.config.get_configuration()` with `spack.config.config()`
- replace `get_config`/`update_config` with `get`, `set`
- add a path syntax that can be used to refer to specific config options
without firt getting the entire configuration dict
- update usages of `get_config` and `update_config` to use `get` and `set`
fixes#7593
Unit tests on OSX are trying to concretize mpileaks, and they fail due
to a conflict in the package:
"%gcc@7.2.0:" conflicts with "elfutils@0.163"
This solves the issue asking explicitly to concretize against
elfutils@1.170
Fixes#7593
By default MacOS concretizes using the clang compiler. The unit tests
include a call to "spack spec mpileaks", which has elfutils as a
dependency; #7096 added a conflict in elfutils to avoid building
with clang, which lead to the MacOS unit tests to start failing.
This updates the concretization to force using gcc when concretizing
mpileaks.
* Revert "Travis: use --concurrency=multiprocessing only on build tests (#6872)"
This reverts commit 596d463714.
* Removing 'coverage combine' in test script
According to what was discovered in #6887, one of the problems is
calling 'coverage combine' twice without the '-a' flag. This removes
the first call within our test scripts.
On a local workstation, it seems that tracking multiple processes during
coverage may result in malformed coverage reports for unit tests and not
for build tests.
Given that multiple processes make a difference in coverage mainly for
build tests, try to disable the tracking for unit tests to see if we get
more stable coverage results.
* Reduce the calls to the python interpreter during initialization
This should reduce the delay the users experience when sourcing the
setup file to activate shell support. It works by generating at once
all the commands that needs to evaluated (they are stored in
a string and later `eval`ed by the shell).
* setup_env.sh: changed `read` with an equivalent magic
For some reason `read` breaks when sourced from a running script.
Change the incantation we use to construct the unique python command
that will be evaluated.
* setup_env.sh: python command now constructed with `printf` for portability
This recovers the support for `zsh` that was broken in previous commits.
* Reworked module file tutorial section
First draft for the SC17 update. This includes:
- adding an introduction on module files + Spack's module
generation blueprints
- adding a set-up section and provide a docker image for easy set-up
- updating all the relevant snippets
- extending a bit some of the concepts that were already touched
* Added reference to #5582 + committed Dockerfiles
Also fixed a couple of typos spotted by Denis.
* module file tutorial: added section on template customization
* module file tutorial: fixed minor typos + rephrased a sentence
* module file tutorial: made explicit that Docker image comes with software
* module file tutorial: improved phrasing and layout.
Thanks Hartzell!
* module file tutorial: added vim and nano to editors
* module file tutorial: fixed typo
* Fixed typos
Thanks Adam!
* module file tutorial: updated Dockerfile + minor changes in introduction
- This isn't one of those autogenerated SVGs from a drawing program!
- This is a completely re-traced, minimalist SVG file with clearly
delineated pieces so that your favorite renderer can draw a Spack logo
at whatever resolution you want.
- Included versions with text, as well.
