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Author SHA1 Message Date
alalazo
00b8e0b567 package.py : joined and simplified try/except blocks in do_install 2016-07-14 09:11:44 +02:00
Denis Davydov
668b4f1b2c mkl: set MKLROOT 2016-07-13 23:36:23 +02:00
Michael Kuhn
5ffc50732b flake8 fixes 2016-07-13 23:05:08 +02:00
alalazo
9d66b85492 log : changed semantic for start / join (now it's explicit) 2016-07-13 22:51:12 +02:00
alalazo
90b131260b log : changed semantic for start / join (now it's explicit) 2016-07-13 22:50:39 +02:00
Michael Kuhn
fcfe2618d5 Improve shell integration. 
Enable sh emulation for Zsh and allow loading modules recursively.
 2016-07-13 20:33:14 +02:00
Todd Gamblin
d24c11f2b1 Merge pull request #1231 from adamjstewart/fixes/bzip2 
Patch both bzip2 makefiles
 2016-07-13 10:46:58 -07:00
Adam J. Stewart
3864da6300 Flake8 2016-07-13 11:45:16 -05:00
Adam J. Stewart
d09b0c95ec Filter both makefiles to allow intel to build bzip2 2016-07-13 11:45:16 -05:00
alalazo
7cedd620f1 package.py : added CMakePackage, changed qhull, ibmisc, openjpeg to work as examples 2016-07-13 17:36:06 +02:00
alalazo
0e2afedb7f doc : fixes #1239 2016-07-13 12:43:48 +02:00
Denis Davydov
de9cce3e80 p4est: flake8 2016-07-13 11:45:33 +02:00
Denis Davydov
52ca215e29 mkl: add provide blas/lapack 2016-07-13 11:42:40 +02:00
alalazo
ad16830f71 log : added timeout to avoid deadlocks on daemon join 2016-07-13 11:20:23 +02:00
alalazo
468a6431f9 package.py : workaround for a known bug that was not fixed in python 2.6 
https://bugs.python.org/issue1515
 2016-07-13 11:08:19 +02:00
Denis Davydov
b8bd02c5b2 p4est: use run_tests instead of a variant 2016-07-13 10:56:40 +02:00
alalazo
5cc59507f7 package.py : hdf5 and lzo have examples of run_tests 2016-07-13 09:27:09 +02:00
alalazo
97c2224cd6 package.py : extra arguments, fixed inheritance issue 
- added attribute to hold extra arguments in PackageBase instances
- fixed registration from within packages
- examples : hdf5, lzo
 2016-07-13 09:27:09 +02:00
alalazo
813cb032c4 package.py : updated logic to log.py rework 
Conflicts:
	lib/spack/spack/package.py
 2016-07-13 09:27:09 +02:00
alalazo
513cdd580e do_install : can stop at an arbitrary phase 
Now uses a StopIteration exception as a signal
 2016-07-13 09:27:09 +02:00
alalazo
9af964a6d6 log_output : moved from os.fork to multiprocessing.Process 2016-07-13 09:27:09 +02:00
alalazo
440e71ff13 build_environment : moved from os.fork to multiprocessing.Process 2016-07-13 09:27:09 +02:00
alalazo
857d7bfe0f do_install : can stop at an arbitrary phase 
The mechanism would be simpler if we could leverage exceptions to raise signals. Unfortunately forking does not permit to do so.
 2016-07-13 09:27:09 +02:00
alalazo
a43c63f149 package : added EditableMakefile 
Modifications :
- added EditableMakefile to PackageBase subclasses
- astyle modified as an example
- preliminary hook to stop at a certain phase of install
 2016-07-13 09:27:09 +02:00
alalazo
8f75d34331 package : added a stub for AutotoolsPackage, examples in szip and swiftsim 2016-07-13 09:27:09 +02:00
alalazo
8ed028e2d6 package : introduced InstallPhase, added decorators for prerequisites and sanity_checks of phases 2016-07-13 09:27:09 +02:00
alalazo
a36f3764af package : added hooks for generic phases 2016-07-13 09:27:09 +02:00
George Hartzell
a73d91a2e5 Add URL and md5 for jdk-8u92. 
Installed on Centos7.2 system, `java -version` works.
 2016-07-12 16:59:08 -04:00
Todd Gamblin
27aa265abd Merge pull request #1211 from hartzell/patch-3 
Typo: verison -> version
 2016-07-12 13:53:52 -07:00
Michael Kuhn
b7d9b58cc5 Fix preferred providers. 2016-07-12 19:57:08 +02:00
Glenn Johnson
955d02049c New package - r-ggvis 
Bring in ggvis and dependencies.

GGvis is an implementaion of the 'Grammar of Graphics', combined with
shiny.
 2016-07-12 12:27:54 -05:00
Todd Gamblin
069de3f008 Merge pull request #1223 from glennpj/tidyr 
New package - r-tidyr
 2016-07-12 00:23:09 -07:00
Todd Gamblin
04b3d8d86f Merge pull request #1222 from glennpj/libxml2 
Use the site_packages_dir from the Python class
 2016-07-12 00:22:45 -07:00
Glenn Johnson
502d15fd3b New package - r-tidyr 
Tools for changing the layout of data sets.
 2016-07-11 21:12:28 -05:00
Glenn Johnson
5e323b052a Remove import of os 
The import of `os` is no longer needed.
 2016-07-11 20:21:25 -05:00
Glenn Johnson
81daaddfe9 Use the site_packages_dir from the Python class 
It is not necessary to set site_packages_dir in this package as it is
already provided by the Python package class.
 2016-07-11 20:08:30 -05:00
Todd Gamblin
38e722f75d Merge pull request #1215 from glennpj/prefix_inspections 
Add share/man to prefix inspections.
 2016-07-11 16:47:22 -07:00
Todd Gamblin
15790d7018 Merge pull request #1207 from davydden/pkg/dealii_update_petsc37 
dealii: update for petsc37
 2016-07-11 15:32:32 -07:00
Todd Gamblin
551d9eb328 Merge pull request #1220 from glennpj/libxml2 
Fix libxml2 error reported on Google Groups list
 2016-07-11 15:27:15 -07:00
Glenn Johnson
1b08296392 Fix flake8 error 2016-07-11 17:22:31 -05:00
Glenn Johnson
8de84b5d8a Fix error reported on Google Groups list 
Fixes the reported `TypeError: not enough arguments for format string`
error.
 2016-07-11 16:56:26 -05:00
Todd Gamblin
78ac11ff88 Merge pull request #1217 from LLNL/features/git-submodule-init 
Add `submodules` option for git fetching.
 2016-07-11 14:17:41 -07:00
Todd Gamblin
283d621b6e Add documentation for fetching submodules. 2016-07-11 13:27:37 -07:00
Todd Gamblin
86b1b28906 Add submodules option for git fetching. 2016-07-11 13:27:35 -07:00
Todd Gamblin
efdcd199c1 Merge pull request #1218 from glennpj/dplyr 
New package - r-dplyr
 2016-07-11 13:19:09 -07:00
Todd Gamblin
db1516d582 Merge pull request #1219 from glennpj/lubridate 
New package - r-lubridate
 2016-07-11 13:18:44 -07:00
Glenn Johnson
d99fbbb68f New package - r-lubridate 
Functions to work with date-times and timespans.
 2016-07-11 14:59:47 -05:00
Glenn Johnson
11960e53ef New package - r-dplyr 
This brings in dplyr and dependencies.
 2016-07-11 14:50:33 -05:00
alalazo
5f861e075c Merged develop into branch 2016-07-11 20:57:55 +02:00
Todd Gamblin
255d05a9c1 Merge pull request #1214 from glennpj/rfilter 
Filter compilers for R
 2016-07-11 11:37:39 -07:00