Commit graph

10679 commits

Author SHA1 Message Date
Erik Schnetter
8552efe54f
amrex: New version 20.04 (#15808) 2020-04-01 13:41:23 -05:00
Robert Pavel
47f135534c
Added v3 of Laghos (#15806)
* Added v3 of Laghos

Added v3 of Laghos as per
https://github.com/CEED/Laghos/blob/v3.0/README.md

* Update var/spack/repos/builtin/packages/laghos/package.py

Changed develop->master as per PR

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* Made Metis Dependency Explicit

Added explicit metis dependency

* Folded @develop Laghos Deps in to @3.0:

Theoretically there will be a difference between develop and 3.0: in the
future but currently there is not

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-04-01 13:32:15 -05:00
Adam J. Stewart
64b14b64c0
OpenDX: add new package (#15737) 2020-04-01 13:30:03 -05:00
Robert Pavel
6ad717cc9d
Fixed Remaining Shared Objects in Static Lua (#15787)
Fixed removal of remaining references and symlinks to so files when
building lua with static libraries
2020-04-01 12:31:01 -05:00
Nichols A. Romero
917c0a0efd
Minor LLVM libomptarget fixes (#15788)
* Add myself as a maintainer

* This was a regression that occured in previous PR. Flang has been excised from LLVM for now until f18 is merged upstream.

* Libraries only needed when a GPU backend is present.
2020-04-01 12:28:36 -05:00
Sinan
67fbf257f0
Package/sfcgal fix typo (#15796)
* fix typo in dependency definition

* remove arbitrary dependency constraint

Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
2020-04-01 12:05:53 -05:00
Andrew Gaspar
58cb2e5092
Add libgit2 1.0.0 and 0.28.5 (#15801) 2020-04-01 12:02:55 -05:00
Axel Huebl
c430ad91c3
pybind11 2.5.0: Include Change (#13905)
Add pybind11, version 2.5.0.
This release adds improved include helpers.
2020-04-01 08:58:09 -07:00
Sinan
49aa28790c
new package: py-spatialite (#12597)
* new package: py-spatialite

* make flake8 happy

Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
2020-04-01 08:09:39 -05:00
Dr. Christian Tacke
97cfef320c
slurm: new version, system configuration path (#15466)
* Add version 18-08-9-1
* Add variant to allow setting the sysconfdir: See below

About sysconfdir:

slurm has a server and a client.
To use the correct communication channel, the client needs
to be able to read the correct config.  This config is in
PREFIX/etc.

Let's assume one has the server part installed as a system
package.  This generally is a good idea, so that the server
gets started during boot.  This means, that the config is
in /etc/slurm.

If one now wants to use the client part (library!) via
spack, one has a problem: spack's slurm looks in
SPACK-PACKAGE-PREFIX/etc for the config.

There needs to be a way to let the spack installed package
use the system's config.

So add a variant to override the path during build:
sysconfdir=/etc/slurm.

This is much like what happened in #15307 for munge.
2020-04-01 08:07:41 -05:00
Phil Tooley
315faf8b77
Extrae: update package shasum and binutils version (#15516)
Co-authored-by: telemin <telemin@protonmail.ch>
2020-03-31 16:14:43 -07:00
Adam J. Stewart
8748160984
GMT: add 6.0.0 (#15785) 2020-03-31 15:44:17 -05:00
Adam J. Stewart
25a65638ff
autoconf-archive: add new package (#15782) 2020-03-31 13:02:20 -05:00
Adam J. Stewart
663c3d21b5
JasPer: add 2.0.16 (#15781) 2020-03-31 12:08:26 -05:00
Ben Morgan
77e1384902
geant4: new version 10.6 plus simplifications (#15447)
* geant4: new version 10.6 plus simplifications

Add new 10.6.0 release, migrating download of source to use Geant4's
public release repo on CERN GitLab. Change versioning scheme to use
clearer and standard semantic scheme.

Update geant4-data and g4XXX data packages with new versions. Migrate
geant4-data as a BundlePackage of the g4XXX packages, installing links
to each under a single directory under share for geant4-data. Ensure
each g4XXX package exports the environment variable pointing to its
location expected by Geant4.

Remove "data" variant from Geant4 package and always use geant4-data.

Simplify cxxstd variant transport to dependencies.

* g4<DATA>: Use self to resolve correct prefix

* geant4, data: Fix flake8 errors

* g4photonevaporation: flake8 fix

* geant4: vecgeom version depends_on

Geant4 major.minor versions have specific dependencies on vecgeom
versions. Add missing vecgeom version for geant4 10.5, and match
version requirements for vecgeom in geant4 depends_on.

* geant4: c++17 patch specific for 10.4.3

* geant4: simplify geant4-data setup

* geant4: Use new define_from_variant function

* geant4: fix flake8 errors
2020-03-31 09:54:31 +01:00
Toyohisa Kameyama
628516c761
ppOpen-APPL/FVM: new package. (#15772)
* ppOpen-APPL/FVM: new package.

* copy_tree -> install_tree.
2020-03-30 23:02:14 -05:00
Satish Balay
864960937d
superlu-dist: add new version 6.3.0 (#15766) 2020-03-30 19:52:31 -05:00
Ryan Mast
8bc6b290e5
helics: add new package (#15763)
* helics: add new package

* Remove FIXME boilerplate

* Use open @master: verison range for git dependency and remove mpi fix branch version

* Add blank line after spack import
2020-03-30 19:50:53 -05:00
Satish Balay
a96b742797
Balay/petsc 3.13.0 (#15767)
* petsc: add 3.13.0 (using petsc-lite) and 3.12.5

* petsc@3.13.0: update hdf5 and superlu-dist dependencies

* flake8 fix

* fixes for comments

Co-authored-by: Jed Brown <jed@jedbrown.org>
2020-03-30 19:50:29 -05:00
Adam J. Stewart
3c18d2a0e8
py-torch: make sure unit tests are registered (#15765) 2020-03-30 17:44:58 -05:00
Adam J. Stewart
ccc7c9b86d
py-horovod: fix compilation of ~cuda (#15719)
* py-horovod: fix compilation of ~cuda

* Rewrite py-horovod with only 3 variants

* Add upstream patch to workaround compilation issue
2020-03-30 16:09:17 -05:00
Andrew W Elble
6747ecde16
py-onnx: depends on cmake >= 3.1 (#15762)
* py-onnx: depends on cmake >= 3.1

* Update var/spack/repos/builtin/packages/py-onnx/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-03-30 14:58:57 -05:00
Amjad Kotobi
0c7fff6065
Update git version to 2.26.0 (#15756)
* Update git version to 2.26.0

* Fix1
2020-03-30 11:56:40 -05:00
Robert Pavel
8d1e88658d
Aded Option to Disable Shared Lua library Generation (#15758)
* Aded Option to Disable Shared Lua library

Added option to disable generation of shared object library for lua to
avoid build issues on static only platforms

* Fixed Flake8 Issue with Lua Spackage

Fixed indentation issue with lua spackage
2020-03-30 11:56:23 -05:00
Hadrien G
abdada03a8
Add ACTS v0.20 and take move to GitHub into account (#15757) 2020-03-30 16:48:36 +01:00
Fabian Brandt
605b7b5d23
New package: libnetworkit (#15714)
* New package libnetworkit

* Fixed artificial dependency restriction
2020-03-30 08:17:21 -05:00
Carson Woods
e9d573d110
package: add additional configuration options to lmod (#15682)
* Add further configuration options

* Convert auto-swap to auto_swap. Might eventually switch to key-value pair instead.
2020-03-30 08:14:07 -05:00
Carson Woods
05b7ec48c5
Add additional config options to gdb (#15754) 2020-03-29 23:05:24 -05:00
Carson Woods
3cbc26cfa6
Add additional configuration options for binutils (#15753) 2020-03-29 23:05:11 -05:00
Adam J. Stewart
757d768a07
py-mayavi: add new package (#15751) 2020-03-29 21:11:13 -05:00
Adam J. Stewart
7bed5e7c1a
py-envisage: add new package (#15748) 2020-03-29 20:41:24 -05:00
Adam J. Stewart
0372582bf0
py-apptools: add new package (#15747) 2020-03-29 20:08:52 -05:00
Carson Woods
61c1322430
new package: intel-mpi-benchmarks (#15745)
* Add initial attempt at intel-mpi-benchmarks package

* Add more checksummed versions

* Changes to how makefile is handled

* First working install version. Needs tuning to support building specific benchmarks

* Add variant for building specific benchmarks rather than all of them

* Minor syntax change
2020-03-29 19:46:16 -05:00
Adam J. Stewart
17cd359ddf
py-traitsui: add new package (#15744) 2020-03-29 19:38:02 -05:00
Adam J. Stewart
f1aab835fe
CitcomS: add maintainer, master version, python dep (#15742) 2020-03-29 17:23:21 -05:00
Adam J. Stewart
4287d2290c
py-pyface: add new package (#15743) 2020-03-29 17:22:24 -05:00
Adam J. Stewart
df4e89770a
py-traits: add new package (#15741) 2020-03-29 16:34:18 -05:00
Jean-Paul Pelteret
4b3b023284
deal.II: Update dependencies and fix target for vectorisation (#15731)
* Update ADOL-C homepage url

* Update SymEngine to v0.6

* deal.II: Add code to add target vectorisation flags
2020-03-29 10:56:15 -05:00
Adam J. Stewart
c3d0973c3e
motif: add pkgconfig dependency (#15736) 2020-03-29 10:55:57 -05:00
Andrew W Elble
beaa4fbe3c
New package: gdrcopy (#15732)
* New package: gdrcopy

provides the userspace libraries for gdrcopy.

* Update var/spack/repos/builtin/packages/gdrcopy/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-03-28 16:44:23 -05:00
Daniele Cesarini
ddccad14c9
XIOS: add new versions (#15728)
* XIOS: add new versions

Patch has been removed because it was not applied to any previously
existing versions and it actually breaks the new versions added by this
PR.

* Sort versions from newest to oldest
2020-03-28 15:49:21 -05:00
Tom Scogland
a3e1b2bd58
llvm: libomptarget support (#14060)
This allows the llvm build to support:

* clang cuda
* libomptarget for:
  * current host
  * cuda
* bitcode compilation of libomptarget device runtime for inlining by 
  bootstrapping libomptarget
* split dwarf information support as an option for debug builds, if you need a
  debug build, for the love of all that's good in the universe use this flag
* adds necessary dependencies for shared library builds and libomp and
  libomp target to build correctly
* new version of z3 to make it sufficient to build recent llvm

The actual change is much smaller than the diff, this is because it's been formatted with black.  I realize this kinda sucks right now, but I'm hoping it will make future updates here less painful.
2020-03-28 13:20:06 -07:00
Kai Germaschewski
f3c2ebbfb8
fix gcc@8.4.0 build (#15729)
the gcc package.py includes patches for a sanitizer related bug that look
like they've been fixed in gcc 8.4.0, which caused `spack install` to fail.

This PR excludes patching gcc >= 8.4.0 and < 9.0.0.
2020-03-28 13:06:17 -05:00
Amjad Kotobi
c1d111af74
Add package swiftclient (#15700)
* Add package swiftclient

* Fix on url

* Package name changed to py-python-swiftclient and changes on dependencies
2020-03-28 12:14:05 -05:00
iarspider
6969526e0f
py-statsmodels: update to 0.102 and fix dependencies (#15708)
* py-statsmodels: update to 0.102 and fix dependencies

* Update var/spack/repos/builtin/packages/py-statsmodels/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-03-28 12:13:47 -05:00
Daryl W. Grunau
8beeeeb74c
new package ddd (#15717)
* new package ddd

* mitigate build/installs on case-insensitive filesystems

* add missing variants

* flake8 fixes

* flake8: E124 closing bracket does not match visual indentation

Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
2020-03-28 12:12:49 -05:00
iarspider
33f424ff1d
Update URL for new py2neo versions (#15324)
* Update URL for new py2neo versions

* Use pypi for py-py2neo

* Add version 4.3.0

* Update py2neo dependencies

* Apply suggestions from code review

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-03-28 09:15:28 -05:00
Christoph Junghans
0b1c0bdd6e
xsbench: fix build of v19 (#15715)
* xsbench: fix build of v19

* Flake8
2020-03-28 09:11:37 -05:00
iarspider
27e4a4750d
Hack to select iconv implementation - libiconv vs. libc iconv (#15437)
(re-do of #15213 due to changes in gnupg recipe)
2020-03-28 09:10:31 -05:00
Veselin Dobrev
9f7255da71
mesa: re-introduce the libs property (#15716)
They were originally added in #8904 and later removed (why?) in #10482.
2020-03-28 11:30:05 +01:00