hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
1692 commits 3 branches 52 tags 188 MiB
Commit graph

809 commits

Author SHA1 Message Date
Erik Schnetter
60ec79eac3 New package PCRE2 
This is a major update of the package PCRE. It seems both PCRE and PCRE2 can be installed at the same time; their APIs are different.
 2015-12-22 18:53:43 -05:00
Erik Schnetter
a540a68561 Make OpenSSL build on Darwin 2015-12-22 18:51:49 -05:00
Todd Gamblin
d1d23ec5e6 Merge pull request #257 from eschnett/eschnett/hwloc-1.11.2 
Update hwloc; don't require libpciaccess on OS X
 2015-12-22 15:18:39 -08:00
Erik Schnetter
552d8ca5f0 Update rsync to 3.1.2 2015-12-22 16:40:09 -05:00
Erik Schnetter
6831ee6f0a Skip installing libpciaccess on Darwin 2015-12-22 16:24:05 -05:00
Erik Schnetter
6dc1fc03c1 Update hwloc; don't require libpciaccess on OS X 
- hwloc 1.11.2 is available.
- libpciaccess is not supported on OS X; don't require it there.
 2015-12-22 15:50:46 -05:00
Todd Gamblin
100ada0ed6 Merge pull request #266 from LLNL/bugfix/python3-setuptools-conflict 
fix conflict with setuptools and cached pyc files
 2015-12-22 09:19:57 -08:00
Gregory L. Lee
41fd380d1b fixed site pyc regular expression 2015-12-22 09:15:47 -08:00
Todd Gamblin
b1d40efd99 Merge pull request #261 from LLNL/features/prefer-versions-in-packages 
Add ability to prefer particular versions in packages.
 2015-12-22 08:25:52 -08:00
Gregory L. Lee
3db1c1761e only ignore cached site.py file 2015-12-22 08:03:17 -08:00
Todd Gamblin
5bcec9289e Merge pull request #263 from nolta/hdf5-mpi 
fix non-mpi hdf5 package build
 2015-12-22 07:57:11 -08:00
Gregory L. Lee
d85a46380c fix conflict with setuptools and cached pyc files 2015-12-22 06:50:18 -08:00
alalazo
fc43f3c730 valgrind : added package 2015-12-22 10:11:18 +01:00
Mike Nolta
bfc72c04fb fix non-mpi hdf5 package build 
Fixes a couple of issues in c5b7eba457.
 2015-12-21 18:59:01 -05:00
Todd Gamblin
fe0fdf60b4 Add ability to prefer particular versions in packages. 
- Adding `preferred=True` to a version directive will change its sort
  order in concretization.

- This provides us a rudimentary ability to keep the Spack stack
  stable as new versions are added.

- Having multiple stacks will come next, but this at least allows us
  to specify default versions of things instead of always taking the
  newest.
 2015-12-21 15:35:47 -08:00
Gregory L. Lee
c3aaf005e2 new python versions 2015-12-21 15:14:59 -08:00
Gregory L. Lee
f9326053b9 remove numpy compiler patch 2015-12-21 13:56:19 -08:00
Todd Gamblin
73ea15db8e Merge pull request #208 from epfl-scitas/features/resource_directive 
resource directive : implementation + clang / llvm use case
 2015-12-21 10:34:16 -08:00
Todd Gamblin
d5e9279c1d Merge pull request #215 from sjtbham/develop 
fix build to work against depends for modules created by setup.py and…
 2015-12-21 09:24:16 -08:00
alalazo
a411c497ab scalasca + dependencies : simplified build after #255 2015-12-21 16:10:55 +01:00
alalazo
0a191d6b09 scalasca : updated package build (depends on scorep, does not build twice). 2015-12-21 15:02:48 +01:00
Todd Gamblin
bb329d8a5c Merge pull request #231 from epfl-scitas/packages/scotch 
scotch: adding dependencies + variants for mpi, shared, compression and esmumps
 2015-12-20 14:29:19 -08:00
Todd Gamblin
d6edaa0970 Merge pull request #251 from epfl-scitas/packages/tau 
Improved build of tau and related dependencies
 2015-12-20 14:26:40 -08:00
alalazo
14c9c61275 tau : scorep is now a variant 2015-12-20 17:38:35 +01:00
Nicolas Richart
27d52badb1 removing completely the write_make_inc function 2015-12-20 13:38:22 +01:00
Nicolas Richart
614c4d1876 moving write_make_inc into a patch function 2015-12-20 13:27:43 +01:00
Todd Gamblin
37db5928b7 Merge pull request #109 from justintoo/add-package-spot 
(Package) Add Spot C++ library (v1.99.3)
 2015-12-19 21:06:22 -08:00
Todd Gamblin
22a4eb6b27 Merge pull request #226 from epfl-scitas/packages/mpiches 
mpich, mvapich2: changes the filter for the wrappers mpi{cc, cxx, f77, fc}
 2015-12-19 21:04:08 -08:00
Todd Gamblin
1b086c928c Merge pull request #227 from trws/fetch-deps 
fetch: add options to fetch missing or all deps
 2015-12-19 21:02:42 -08:00
Todd Gamblin
3d3bea618e Fix empty format strings in some packages. 2015-12-19 20:08:14 -08:00
Mike Nolta
e403576cf9 new package: cfitsio 2015-12-19 18:38:23 -05:00
Gregory L. Lee
8dd1f3ffa5 added mrnet 5.0.1 2015-12-19 07:43:34 -08:00
alalazo
f3837dd686 tau : removed direct otf2 support 2015-12-18 16:15:30 +01:00
alalazo
dfbf1b2205 Merge branch 'develop' of https://github.com/alalazo/spack into packages/tau 2015-12-18 13:00:43 +01:00
alalazo
8dc32aeedb Improved tau build and added optional dependencies 2015-12-18 12:58:29 +01:00
Todd Gamblin
3198522a7f Merge pull request #236 from nolta/cmake-enable-ssl 
cmake: enable ssl, for https downloads
 2015-12-17 23:03:31 -08:00
David Beckingsale
f91e1ae83f Added Lmod package 2015-12-17 15:26:47 -08:00
Todd Gamblin
4d982f5aca Merge pull request #86 from jgalarowicz/develop 
Add support for Krell Institute related products.
 2015-12-17 12:35:30 -08:00
Jim Galarowicz
c02cbaecd8 Change back the previous boost change and change the mrnet variant name to lwthreads. 2015-12-17 07:41:49 -08:00
Todd Gamblin
85c02dbe7b Merge pull request #167 from mathstuf/hdf5-fix-mpi-dependency 
Hdf5 fix mpi dependency
 2015-12-16 12:03:22 -08:00
Todd Gamblin
9ac4c730fb Merge pull request #241 from epfl-scitas/packages/gnuplot 
gnuplot : added package
 2015-12-16 11:37:26 -08:00
alalazo
cc9266e56c gsl : added package 2015-12-16 12:45:58 +01:00
Massimiliano Culpo
d5018e77a3 gnuplot : modifications to build on RHLE 6 2015-12-16 09:32:48 +01:00
Mike Nolta
917fb328bb cmake: enable ssl, for https downloads 
By default cmake builds its own curl, without SSL support. This
patch enables SSL when building cmake, fixing the following error:

  error: downloading 'https://...' failed

    status_code: 1
    status_string: "Unsupported protocol"
    log: Protocol "https" not supported or disabled in libcurl
 2015-12-15 12:39:30 -05:00
alalazo
0a0cd4b9d3 gnuplot : added package 2015-12-15 16:29:36 +01:00
Nicolas Richart
ed7db8e489 adding external dependencies + variants for mpi, shared and compression 2015-12-14 21:59:40 +01:00
alalazo
1bfb16592b fftw : added package 2015-12-14 16:31:02 +01:00
Jim Galarowicz
8df4fd9e94 Fix build of krell tools to use spack with minimal impact on rest of spack packages. 2015-12-13 17:13:34 -08:00
Jim Galarowicz
0fc83ba999 Fix merge conflict with papi package. 2015-12-11 17:23:54 -08:00
Ben Boeckel
6f978af77b hdf5: update dependents to declare MPI support 2015-12-10 11:53:40 -05:00
Ben Boeckel
79a641ccf1 paraview: update hdf5 comment 2015-12-10 11:51:54 -05:00
Ben Boeckel
c5b7eba457 hdf5: make mpi support optional 2015-12-10 11:51:54 -05:00
Tom Scogland
786f4cd2c2 add dependency fetching to mirror creation 2015-12-10 08:32:51 -08:00
Gregory L. Lee
3163d016db install python files to libxml2 prefix instead of python prefix and ignore non-python files when activating 2015-12-09 14:10:05 -08:00
Nicolas Richart
0daa08416a corrected filter_compilers + added it for mvapich2 2015-12-09 20:00:54 +01:00
Todd Gamblin
f6eb000381 Merge pull request #225 from epfl-scitas/packages/git 
Adding https support in git even if system lib are missing
 2015-12-09 10:59:47 -08:00
alalazo
20e67bc5e6 clang : solve the issue with missing default include paths for OpenMP and libc++ 
resource : support for finer grained linking of resources
 2015-12-09 17:15:26 +01:00
Nicolas Richart
31863c68d8 Adding curl and expat support to git for https repos 2015-12-09 11:00:33 +01:00
Todd Gamblin
e46af913be Merge pull request #148 from PaulDapolito/glib-dep 
added zlib dependency to glib package specification
 2015-12-09 01:44:00 -08:00
Todd Gamblin
8ebac18f50 Merge pull request #224 from epfl-scitas/packages/gdb 
gdb : added package
 2015-12-09 01:35:04 -08:00
Todd Gamblin
c41b9b7ddc Change github.com/scalability-llnl to github.com/llnl everywhere. 2015-12-09 01:24:15 -08:00
alalazo
4d5eb4ce7d gdb : added package 2015-12-09 09:06:10 +01:00
alalazo
c5b9732aed Should fix #177 
gcc : changed objdir to something out of srcdir and added '--with-sysroot=/'
binutils : added '--with-sysroot=/'
 2015-12-08 14:06:04 +01:00
Todd Gamblin
e7ab8d476d Merge pull request #219 from eschnett/eschnett/gmp 
Update gmp to 6.1.0
 2015-12-07 16:46:44 -08:00
Todd Gamblin
6bc86a6baa Merge pull request #220 from eschnett/eschnett/mpc 
Update mpc to 1.0.3
 2015-12-07 16:46:32 -08:00
Todd Gamblin
b0434fa486 Merge pull request #221 from davidbeckingsale/features/cleverleaf-boost 
Update CleverLeaf package to use Boost and fix SAMRAI MPI usage
 2015-12-07 16:46:15 -08:00
Matthew LeGendre
f8e046bb33 Fix issue with gcc 5.x not building on RHEL6 2015-12-07 15:49:47 -08:00
Gregory L. Lee
1a22a507d6 mesa requires +python variant of libxml2 2015-12-07 15:36:36 -08:00
David Beckingsale
36272c8136 Fix MPI selection in SAMRAI and remove narrow dependency specification 2015-12-07 14:58:16 -08:00
David Beckingsale
77bf133cd2 Update CleverLeaf package to use Boost and fix SAMRAI MPI usage 2015-12-07 14:33:31 -08:00
Erik Schnetter
aff95ee587 Update mpc to 1.0.3 2015-12-05 11:23:40 -05:00
Erik Schnetter
29537b9991 Update gmp to 6.1.0 2015-12-05 11:21:47 -05:00
Gregory L. Lee
5891847ae4 added py-pillow and updated py-basemap to depend on it 2015-12-03 15:35:28 -08:00
Gregory L. Lee
a56c7e5f1a Merge branch 'develop' of https://github.com/scalability-llnl/spack into develop 2015-12-03 15:02:49 -08:00
Gregory L. Lee
0f4efc018d updated package versions 2015-12-03 15:01:44 -08:00
Nicolas Richart
1a132e4fdb Missing declaration of the debug variant 2015-12-02 16:18:29 +01:00
Simon Thompson
aa137d8be0 fix build to work against depends for modules created by setup.py and add python3 support 2015-12-02 14:20:11 +00:00
Nicolas Richart
4bb6f23ae1 Adding variant for mpi and python + compression for iostream 2015-12-02 13:26:00 +01:00
Massimiliano Culpo
39a3cfd4d9 reource directive accepts 'basename' keyword 
llvm : libc++ variant
 2015-12-02 12:24:37 +01:00
Massimiliano Culpo
a173ab1e31 clang : default OpenMP is libomp 2015-12-01 12:16:08 +01:00
Kevin Huck
cd1207329b Updating the OMPT hash again... 2015-11-30 10:32:07 -08:00
Kevin Huck
d5c7cd5e50 Had to force a patch to the OMPT support, so the hash for v0.1 has 
changed.
 2015-11-30 09:48:15 -08:00
Tom Scogland
b253308eee returning flux to a building state for web release 
Flux package reworked to include all new dependencies, fixed issues with a
clean-build of hwloc, lua and czmq as well that prevented flux from building
cold on a minimal system.
 2015-11-29 19:22:31 -08:00
Todd Gamblin
7383bd393e Fixed bug #42: problem with satisfies() for virtual dependencies. 
- _cross_provider_maps() had suffered some bit rot (map returned was
  ill-formed but still worked for cases with one vdep)

- ProviderIndex.satisfies() was only checking whether the result map
  was non-empty.  It should check whether all common vdeps are *in*
  the result map, as that indicates there is *some* way to satisfy
  *all* of them.  We were checking whether there was some way to
  satisfy *any one* of them, which is wrong.

- Above would cause a problem when there is more than one vdep provider.

- Added test that covers this case.

- Added `constrained()` method to Spec. Analogous to `normalized()`:
  `constrain():constrained() :: normalize():normalized()`
 2015-11-27 23:06:18 -08:00
Todd Gamblin
89d5127900 New, cleaner package repository structure. 
Package repositories now look like this:

    top-level-dir/
        repo.yaml
        packages/
            libelf/
                package.py
            mpich/
                package.py
            ...

This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
 2015-11-26 14:19:27 -08:00
Massimiliano Culpo
1fe626ec7c resource directive : sketch of implementation + clang / llvm use case 2015-11-26 17:53:33 +01:00
Tom Scogland
f8ffb005c8 make cram an extension of python 2015-11-25 15:10:18 -08:00
Todd Gamblin
c526c71f56 Merge pull request #201 from alfredo-gimenez/develop 
Fixed Mitos dependency and added new version
 2015-11-24 16:12:12 -08:00
Alfredo Gimenez
a0d388875e Fixed Mitos dependency and added new version 2015-11-24 15:12:31 -08:00
Tom Scogland
a1553dd12b adding google sparsehash and cityhash libraries 2015-11-24 09:23:36 -08:00
Todd Gamblin
e2412e3f21 Merge branch 'eschnett-openblas' into develop 2015-11-24 00:52:48 -08:00
Todd Gamblin
52cce2d710 Revert "WIP: openssl: set KERNEL_BITS to make ./config work" 2015-11-24 00:30:08 -08:00
Erik Schnetter
1d90d98e40 Remove commented-out code 2015-11-23 20:32:06 -05:00
Kevin Huck
4dd47fbc78 cleaning up commits for merge request 2015-11-23 16:16:52 -08:00
Todd Gamblin
98ccad8105 Merge pull request #189 from mathstuf/openssl-use-64-bits 
WIP: openssl: set KERNEL_BITS to make ./config work
 2015-11-23 16:09:28 -08:00
Todd Gamblin
de2213a621 Merge pull request #188 from mathstuf/python-osx 
python: target OS X 10.6
 2015-11-23 16:08:56 -08:00
Todd Gamblin
583b8e3ade Merge pull request #187 from mathstuf/dbus-osx-disable-launchd 
dbus: disable launchd support
 2015-11-23 16:08:35 -08:00
Todd Gamblin
b5fffc71c9 Merge pull request #168 from mathstuf/libxml2-drop-python-dep 
Libxml2 drop python dep
 2015-11-23 16:08:24 -08:00
Todd Gamblin
0011903e23 Merge pull request #165 from mathstuf/paraview-update-deps 
Paraview update deps
 2015-11-23 16:04:03 -08:00
Todd Gamblin
9bc27561ec Merge pull request #164 from mathstuf/matplotlib-optional-deps 
Matplotlib optional deps
 2015-11-23 16:03:31 -08:00
Todd Gamblin
76100a6f08 Merge pull request #158 from davidbeckingsale/features/cleverleaf 
Add CleverLeaf package
 2015-11-23 16:00:39 -08:00
David Beckingsale
38b83362b6 Updated url and description 2015-11-23 15:58:33 -08:00
Todd Gamblin
c13329c25a Merge pull request #155 from epfl-scitas/packages/mvapich2 
packages/mvapich2 : added support for process managers and network types
 2015-11-23 15:53:53 -08:00
Todd Gamblin
6798c177c6 Merge pull request #157 from alfredo-gimenez/develop 
Added Python Twisted library
 2015-11-23 15:51:57 -08:00
Todd Gamblin
8fbd79fa2e Merge pull request #198 from eschnett/update-papi 
Update PAPI
 2015-11-23 15:42:09 -08:00
Erik Schnetter
60fd7e2268 Update PAPI 2015-11-23 16:50:11 -05:00
Erik Schnetter
cb21a5b309 Add OpenBLAS 2015-11-23 16:48:06 -05:00
Erik Schnetter
1330c10fc8 Don't use https for downloading 2015-11-23 16:00:10 -05:00
Todd Gamblin
be92d0b6a4 Merge pull request #194 from trws/judy 
add judy dynamic array/meta-trie/hash table lib
 2015-11-23 10:10:46 -08:00
Todd Gamblin
7392e1af59 Merge pull request #190 from bhatele/feature/networktools 
Add damselfly package
 2015-11-23 10:10:12 -08:00
Tom Scogland
34700d560f add judy dynamic array/meta-trie/hash table lib 
Just adding judy.
 2015-11-20 12:15:32 -08:00
Abhinav Bhatele
4edcc59c3d Add damselfly package 2015-11-19 23:05:21 -08:00
Ben Boeckel
c023b1000e python: target OS X 10.6 
Targeting anything older lacks rpath stuff which configure uses.
 2015-11-19 17:52:59 -05:00
Ben Boeckel
150e43f3fd WIP: openssl: set KERNEL_BITS to make ./config work 
Why OpenSSL refuses to build without this (it explicitly warns about it)
is a mystery.
 2015-11-19 17:51:44 -05:00
Ben Boeckel
b6d368d7a0 dbus: disable launchd support 2015-11-19 17:50:30 -05:00
Todd Gamblin
34e445a480 Merge pull request #176 from truatpasteurdotfr/develop 
jdk: updated to version 8u66
 2015-11-18 15:58:33 -06:00
Todd Gamblin
5086a1e825 Merge pull request #178 from eschnett/develop 
Update HDF5 to 1.8.16
 2015-11-18 15:58:13 -06:00
Todd Gamblin
38ce53bc85 Merge pull request #179 from eschnett/update-hwloc 
Update hwloc to 1.11.1
 2015-11-18 15:58:06 -06:00
Todd Gamblin
89c11221ed Merge pull request #181 from eschnett/update-openmpi 
Update OpenMPI to 1.10.1; correct configure error in OpenMPI
 2015-11-18 15:57:56 -06:00
Todd Gamblin
025566b494 Merge pull request #182 from eschnett/hdf5-mpi 
HDF5: Support non-MPICH MPI implementations
 2015-11-18 15:57:29 -06:00
Todd Gamblin
4f8380959c Merge pull request #183 from eschnett/add-jemalloc 
Add jemalloc package
 2015-11-18 15:56:46 -06:00
Erik Schnetter
2e51e207f9 Update cmake to 3.4.0 2015-11-18 15:17:48 -05:00
Erik Schnetter
cbc552e91e Add jemalloc package 2015-11-18 13:43:49 -05:00
Erik Schnetter
511ffc3b44 HDF5: Support non-MPICH MPI implementations 2015-11-18 13:33:04 -05:00
Erik Schnetter
e36fd7d29f Update OpenMPI to 1.10.1; correct configure error in OpenMPI 2015-11-18 13:13:13 -05:00
Erik Schnetter
af9fe0a038 Update hwloc to 1.11.1 2015-11-18 12:37:54 -05:00
Erik Schnetter
893e05540c Update HDF5 to 1.8.16 2015-11-18 09:55:45 -06:00
Tru Huynh
b2a85bc12e updated to version 8u66 2015-11-18 10:02:22 +01:00
Erik Schnetter
cc49f9b657 Update OpenSSL package 2015-11-17 18:28:20 -05:00
Erik Schnetter
1003b847b6 Remove comment 2015-11-17 17:10:04 -05:00
Erik Schnetter
ad0a1bf70d Add rsync package 2015-11-17 16:47:47 -05:00
Ben Boeckel
b98c25c1fb paraview: update matplotlib and numpy deps 2015-11-16 17:07:28 -05:00
Ben Boeckel
5eb8e1eec8 py-pyside: update docstring 2015-11-16 17:07:27 -05:00
Ben Boeckel
d40897404b py-matplotlib: make the gui and ipython support optional 
ipython, nice as it is, is not required to use matplotlib. The UI bits
are also optional and dragging in Qt and Tcl/Tk for the library
shouldn't be the default.
 2015-11-16 17:07:27 -05:00
Ben Boeckel
485528cffa paraview: configure the python and MPI executables 2015-11-16 17:05:17 -05:00
Ben Boeckel
d3ead7061e paraview: require qt4 
Qt5 has bugs which need at least 5.6.0 for a fix.
 2015-11-16 17:04:35 -05:00
Ben Boeckel
45d981caab paraview: add dependency on libxml2 back 2015-11-16 11:45:27 -05:00
Ben Boeckel
ca01adb503 libxml2: make the python dependency optional 
Also turn it off by default since it is usually not necessary. Anything
needing the Python bindings should declare it explicitly.
 2015-11-16 11:30:35 -05:00
Tom Scogland
8feaefadcf updating lua package to install in correct order 2015-11-13 09:43:03 -08:00
Todd Gamblin
55662eca69 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots 
Conflicts:
	lib/spack/spack/__init__.py
	lib/spack/spack/directives.py
	lib/spack/spack/packages.py
 2015-11-12 15:16:06 -08:00
David Beckingsale
679b617649 Add CleverLeaf package 2015-11-11 12:33:08 -08:00
Alfredo Gimenez
666d9e88f5 Added Python Twisted library 2015-11-10 15:37:09 -08:00
Massimiliano Culpo
27c64f7740 mvapich2 : changed method name for consistency. Removed possibly duplicated flags 2015-11-09 16:02:38 +01:00
Massimiliano Culpo
42bc552dd7 mvapich2 : variant strings are associated with a named variable 2015-11-09 16:02:25 +01:00
Massimiliano Culpo
79ed9de4c1 mvapich2 : added variants for different network types 2015-11-09 16:02:12 +01:00
Massimiliano Culpo
0ae05fdf99 mvapich2 : added variants for different process managers 2015-11-09 16:01:56 +01:00
Massimiliano Culpo
4a72bd7919 mvapich2 : fixed typos. Added FIXME 2015-11-09 16:01:27 +01:00
Massimiliano Culpo
076eaba6e3 mvapich2 : fixed some issues with the package. Needs further improvment with respect to network and pm 2015-11-09 16:00:03 +01:00
Jim Galarowicz
0ced060b87 cbtf did not compile with boost 1.59, so reverted to boost 1.50 temporarily until we fix the cbtf/boost compile issues. 2015-11-06 15:15:38 -08:00
Jim Galarowicz
2aa501bf3d Update the checksum value for the new tarball 2015-11-06 14:19:00 -08:00
Jim Galarowicz
046b348bd3 Merge remote-tracking branch 'upstream/develop' into develop 
Get up to date with rest of develop repository.
 2015-11-06 11:55:49 -08:00
Jim Galarowicz
aa9b14aff4 Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:55:20 -08:00
Jim Galarowicz
7e6b7795f1 Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:53:53 -08:00
Jim Galarowicz
d6a2ab08ac Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:47:00 -08:00
Todd Gamblin
9474b8cdac Merge pull request #153 from ktkirk/libxml2 
Was getting system python over spack python
 2015-11-05 10:12:55 -08:00
Gregory Lee
886861c9f4 Merge pull request #151 from scalability-llnl/features/bzip2-mac 
Modified bzip2 package to work properly on macs.
 2015-11-05 09:29:47 -08:00
David Beckingsale
19876161c7 Update ZSH version 2015-11-05 07:42:18 -08:00
Kelly T. Kirk
618a1c7119 Was getting system python over spack python 2015-11-05 08:01:00 -05:00
Todd Gamblin
1c4ef29962 Add Sphinx package 2015-11-04 17:55:43 -08:00
Todd Gamblin
f201bfb998 Modified bzip2 package to work properly on macs. 2015-11-04 17:43:22 -08:00
Paul Dapolito
16f0ece75b added zlib dependency to glib package specification 2015-11-01 19:55:14 -08:00
Todd Gamblin
58adff307f Merge pull request #142 from mathstuf/dbus-disable-systemd 
dbus: disable systemd
 2015-10-29 00:07:03 -07:00
Todd Gamblin
5d626ac561 Merge pull request #141 from epfl-scitas/packages/clang 
clang : updated versions + depends_on(python)
 2015-10-29 00:06:50 -07:00
Todd Gamblin
11c3a9f60d Merge pull request #143 from mathstuf/update-ncurses 
ncurses: update package
 2015-10-29 00:03:40 -07:00
Todd Gamblin
130d2d8de0 Merge pull request #144 from mathstuf/add-paraview 
paraview: add package
 2015-10-29 00:03:15 -07:00
Todd Gamblin
dab230845d Merge pull request #121 from epfl-scitas/issues/gcc 
GCC : added variant to packages for binutils, solve linking time error
 2015-10-28 23:29:33 -07:00
Ben Boeckel
ddbfc40303 paraview: add package 
A first attempt; builds successfully. Some dependencies have hard-coded
dependencies where they shouldn't (e.g., hdf5 -> mpi, libxml -> python),
but that's a different rabbit hole.
 2015-10-27 15:37:31 -04:00
Ben Boeckel
b88da83a12 dbus: disable systemd 
Not necessary in spack. Also forcefully installs outside of the prefix.
 2015-10-27 13:51:23 -04:00
Ben Boeckel
e8f5a85ffd ncurses: update package 2015-10-27 13:50:59 -04:00
Massimiliano Culpo
3913c10afb clang : updated versions and dependencies 
llvm : added dependency on 'python@2.7:' for better portability
 2015-10-27 08:04:55 +01:00
Massimiliano Culpo
8b22a4f4f8 llvm : updated versions 2015-10-27 08:04:20 +01:00
Paul Dapolito
cd2a23384f Added v5.2.2 for xz library 2015-10-26 14:28:56 -07:00
Massimiliano Culpo
e812c35689 GCC : removed binutils variant 2015-10-23 10:11:38 +02:00
Todd Gamblin
f76b3890ff Merge pull request #137 from davidbeckingsale/features/ompi-wrappers 
Filter wrapper data to use correct compilers in OpenMPI
 2015-10-22 16:01:55 -04:00
David Beckingsale
9f496e5efa Replace compiler in f90 and f77 wrappers if they exist 2015-10-22 09:50:02 -07:00
David Beckingsale
41c01b523f Filter wrapper data to use correct compilers in OpenMPI 2015-10-22 09:13:20 -07:00
Todd Gamblin
cbcc6fc9f5 Merge branch 'khuck-develop' into develop, github PR #136 2015-10-22 08:27:23 -07:00
Kevin Huck
7cb557cba7 Adding dependency on ompt-openmp, now that it is a package. 2015-10-22 08:06:31 -07:00
Kevin Huck
caf93cc408 Adding package for OMPT support in the LLVM/Clang OpenMP runtime, 
which gives OMPT support for applications built with GCC, Intel or
LLVM/Clang.
 2015-10-22 08:03:50 -07:00
Massimiliano Culpo
e6a44bd8ac GCC : removed dependency on libelf. Removed isl variant 2015-10-22 15:55:43 +02:00
Massimiliano Culpo
f475ec4ce6 Merge branch 'develop' of https://github.com/scalability-llnl/spack into issues/gcc 
Conflicts:
	var/spack/packages/gcc/package.py

GCC : removed dependency on libelf. Removed isl variant
 2015-10-22 15:53:44 +02:00
Kevin Huck
24838a62b4 Changed date formatting. 2015-10-22 06:02:56 -07:00
Kevin Huck
2a61ff0794 Changing git checkout from "master" to commit 
d2e66ddde689120472fc57fc546d8cd80aab745c
 2015-10-22 03:57:33 -07:00
Kevin Huck
fb9eca4226 Added an APEX package, but it is still using the git master instead 
of a release.
 2015-10-21 19:35:31 -07:00
Kevin Huck
c082abfb65 Modified the binutils package to use --enable-shared. Required by tools that 
use binutils and get this error (or equivalent):
"relocation R_X86_64_32S against `bfd_errmsgs' can not be used when
making a shared object; recompile with -fPIC"
 2015-10-21 18:32:57 -07:00
Todd Gamblin
1f662465c2 Merge pull request #119 from mamelara/develop 
Added current version 3.2 of libffi version 3.1 has a bug
 2015-10-21 16:07:26 -04:00
Todd Gamblin
c8f01480d6 Merge pull request #128 from mathstuf/netcdf-new-linker-mpi 
netcdf: link to MPI
 2015-10-21 16:02:59 -04:00
Todd Gamblin
c388cbe8e4 Merge pull request #131 from jsquyres/pr/openmpi-update 
openmpi: update package versions of Open MPI
 2015-10-21 15:59:12 -04:00
Todd Gamblin
6773a2b3bf Merge pull request #132 from jsquyres/pr/mpich-mpi-version-fix 
mpich: add fine-grained MPI conformance versions
 2015-10-21 15:58:41 -04:00
Todd Gamblin
59dfb1c175 Merge pull request #134 from davidbeckingsale/features/ncdu 
Added ncdu package
 2015-10-21 15:58:02 -04:00
Todd Gamblin
345fd3b285 Merge pull request #133 from epfl-scitas/packages/trilinos 
Packages/trilinos
 2015-10-21 15:54:13 -04:00
Kevin Huck
e0e79a2cb3 Adding package for activeharmony. 2015-10-21 11:56:01 -07:00
David Beckingsale
7e2f3cff44 Added ncdu package 2015-10-19 15:41:46 -07:00
Massimiliano Culpo
ec5560374c glm : added basic configuration for the package 2015-10-19 13:56:08 +02:00
Massimiliano Culpo
aab7102b9b matio : added basic configuration for the package 2015-10-19 13:55:44 +02:00
Massimiliano Culpo
3a4bdf1856 trilinos : first version that compiles on bellatrix 2015-10-19 13:48:46 +02:00
Massimiliano Culpo
ff0d039a1f trilinos : prototype for the whole package 2015-10-19 13:48:38 +02:00
Massimiliano Culpo
f4460894be hdf5 : updated version 
mpich : updated version
trilinos : created stub
 2015-10-19 13:48:24 +02:00
Todd Gamblin
44ba16a391 Add libiberty option to binutils 2015-10-17 17:04:34 -07:00
Jeff Squyres
67b94acd42 mpich: add fine-grained MPI conformance versions 
Similar to the Open MPI and MVAPICH packages.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2015-10-17 07:06:06 -04:00
Jeff Squyres
43f58d9f61 openmpi: update the MPI conformance for each Open MPI version 2015-10-16 15:27:22 -04:00
Jeff Squyres
f39e40664f openmpi: add v1.10.0 and update v1.8.2->v1.8.8 2015-10-16 15:26:58 -04:00
Ben Boeckel
9ec4ae83af netcdf: link to MPI 
Newer GNU linker refuses to use transitive linking; if netcdf calls
MPI_Allreduce, it must link the providing library directly.

Also switched to CMake because I don't know autoconf well enough to know
how to put MPI stuff into it.
 2015-10-15 09:20:16 -04:00
Gregory L. Lee
5dd39bfca5 bug fix for github issue 122 2015-10-08 08:12:30 -07:00
Todd Gamblin
5d64012868 Merge branch 'features/libxcb-1.11.1' into develop 2015-10-08 00:13:47 -07:00
Massimiliano Culpo
17de9a37f1 gcc : fixed spec file 2015-10-06 18:49:18 +02:00
Massimiliano Culpo
d44571257a spec file : everything is dumped, only link rule is modified 2015-10-06 18:49:04 +02:00
Massimiliano Culpo
f068d1ba57 GCC : added variants for libelf, binutils, isl. gcc@5.0: still has issues 2015-10-06 18:48:47 +02:00
Gregory L. Lee
6fcf16b710 added libxcb version 1.11.1 2015-10-05 12:59:26 -07:00
Mario Melara
75d30b08fb Added current version 3.2 of libffi version 3.1 has a bug that interferes with glib 2015-10-01 21:51:55 -07:00
Adam Moody
5563c66675 update scr to 1.1.8 2015-09-29 18:18:34 -07:00
Mario Melara
13eb461ec3 Adding bowtie2 package along with patch 2015-09-24 11:21:54 -07:00
Mario Melara
521632b3dc Added samtools bioinformatics software 2015-09-23 16:30:44 -07:00
Todd Gamblin
6d4eed3845 Merge pull request #102 from RasmusWL/features/fish 
Add fish (shell) package
 2015-09-23 01:37:59 -07:00
Todd Gamblin
82ea7aec51 Merge pull request #106 from justintoo/add-package-doxygen 
(Package) Add Doxygen (v1.8.10)
 2015-09-23 01:37:31 -07:00
Todd Gamblin
d474eeb424 Merge pull request #110 from scalability-llnl/features/boostupdate 
update boost package for new releases
 2015-09-23 00:32:22 -07:00
Todd Gamblin
5d6baacc56 Merge pull request #111 from scalability-llnl/features/protobuf 
add protobuf package
 2015-09-23 00:31:26 -07:00
Todd Gamblin
46cf0a23d9 Merge pull request #112 from scalability-llnl/features/glog 
add glog package
 2015-09-23 00:30:37 -07:00
Todd Gamblin
f02af701e5 Merge pull request #113 from scalability-llnl/features/gflags 
add gflags package
 2015-09-23 00:29:50 -07:00
Todd Gamblin
5f826a0ab7 Merge pull request #114 from scalability-llnl/features/snappy 
Features/snappy
 2015-09-23 00:27:27 -07:00
Adam Moody
84823ed828 add lmdb package 2015-09-22 12:17:01 -07:00
Adam Moody
3ade141829 add leveldb package 2015-09-22 11:59:09 -07:00
Adam Moody
30acc6f2f0 add snappy package 2015-09-21 16:45:59 -07:00
Adam Moody
22ba02b22b add gflags package 2015-09-21 16:40:23 -07:00
Adam Moody
b5d7cd55ce add glog package 2015-09-21 16:30:11 -07:00
Adam Moody
e4e22ed17e add protobuf package 2015-09-21 16:19:50 -07:00
Justin Too
3691201b4f (Package) Add Spot C++ library (v1.99.3) 2015-09-21 11:04:56 -07:00
Justin Too
99ca0f3153 (Package) Add Doxygen (v1.8.10) 2015-09-11 20:29:18 +00:00
Rasmus Wriedt Larsen
b06117f77a Add fish (shell) package 2015-09-03 14:19:27 -07:00
Adam Moody
ac088bae6a update boost 2015-09-01 16:02:14 -07:00
Todd Gamblin
6af49d41fd Add elfutils. 2015-08-27 00:10:53 -07:00
Todd Gamblin
13fd742610 Merge branch 'features/pidx' into develop 2015-08-26 23:48:52 -07:00
Todd Gamblin
babbc5bb45 Minor fix-ups for PIDX 2015-08-26 23:48:36 -07:00
Gregory L. Lee
2c3e7a6f87 added graphviz dependency and dysect variant to STAT 2015-08-25 11:48:12 -07:00
Gregory L. Lee
1c9c5a385d added graphviz and dependencies 2015-08-25 11:38:39 -07:00
Todd Gamblin
360b307f68 Save progress. import gov.llnl.spack.mpich works. 2015-08-24 09:14:16 -07:00
Gregory L. Lee
689dbb8fb6 use filter_file instead of patch 2015-08-24 08:51:41 -07:00
Jim Galarowicz
24c609b6df Updates to the Krell related product packages. 2015-08-22 09:34:44 -05:00
Cyrus Harrison
8821715377 add version-based url map for cmake, provide md5 for cmake 3.3.1 2015-08-19 14:18:02 -07:00
Jim Galarowicz
fe9959d4da Merge remote-tracking branch 'upstream/develop' into develop 2015-08-18 08:05:25 -05:00
Peer-Timo Bremer
40b21d7cbe Initial version of PIDX package 2015-08-17 15:38:12 -07:00
Gregory L. Lee
bd1cd83d71 added lapack and blas deps, fixed gfortran compiler dependency 2015-08-17 11:54:14 -07:00
Todd Gamblin
a2f2e6a4ff Save changes to external repo integration 2015-08-16 12:54:02 -07:00
Matthew LeGendre
c7b8d09c7f Add packagerepos to spack, allowing for creating multiple package repositories. 2015-08-16 12:48:32 -07:00
Gregory L. Lee
92ea86dc36 moved lapack package to netlib-lapack 2015-08-14 16:30:35 -07:00
Gregory L. Lee
ec47ab16ce updated blas and lapack packages 2015-08-14 16:27:51 -07:00
Todd Gamblin
c8f65c1530 Fix 2.6 incompatibility 2015-08-13 00:21:02 -07:00
Todd Gamblin
17c2a0d6f3 Merge pull request #92 from trws/flux-build 
pre-alpha flux build and requisite dependencies
 2015-08-13 00:02:49 -07:00
Todd Gamblin
58f848fa29 Merge pull request #94 from alfredo-gimenez/dev-pandas 
Fixed py-pandas package
 2015-08-13 00:00:35 -07:00
Todd Gamblin
f34b04e555 Merge pull request #87 from alfredo-gimenez/develop 
Added gui and cscope features to Vim package
 2015-08-12 23:58:27 -07:00
Alfredo Gimenez
d6bf9c9887 Cscope vim variant depends on cscope 2015-08-07 07:58:04 -07:00
Alfredo Gimenez
d017c5080a Fixed py-pandas package 2015-08-07 00:03:14 -07:00
Alfredo Gimenez
067ecb90b9 Added cscope (dependency for vim+cscope) 2015-08-06 09:28:28 -07:00
Tom Scogland
7182671f8f pre-alpha flux build and requisite dependencies 
NOTE: the ncurses package now installs *BOTH* versions, wide and non-wide
character for compatibility with packages that require either one.  It may be
desirable for this to be an option in the future.
 2015-08-03 11:59:52 -07:00
Mike Nolta
7ebb4fcedc add missing gmp dependency to mpfr package 2015-08-01 16:00:13 -04:00
Tom Scogland
016eef6a16 adding the bear compilation database generator 2015-07-29 14:21:03 -07:00
Alfredo Gimenez
00ab6eb616 Vim with added feature support, including gvim 2015-07-23 11:38:02 -07:00
Tom Scogland
6ad5210216 adding a zsh package 2015-07-22 11:35:51 -07:00
Jim Galarowicz
9fee7be695 Add the initial version of the OpenSpeedShop spack build file. OpenSpeedShop is an application performance analysis tool that runs on Linux and gathers a number of different types of performance data and displays that data in a command line tool (CLI) and via a graphical user interface (GUI). 2015-07-21 11:26:59 -05:00
Jim Galarowicz
e8235b10c6 Add the cbtf-lanl spack build package. cbtf-lanl is LANLs contribution to the CBTF project. It contains psTool and memTool which are example tools, showing use case examples for CBTF. 2015-07-21 11:23:23 -05:00
Jim Galarowicz
23971bae92 Add the cbtf-krell spack build package. cbtf-krell is the krell contribution to the CBTF project and includes services, messages, and core libraries and components that support performance information gathering, transfer, and reduction. 2015-07-21 11:20:27 -05:00
Jim Galarowicz
eff5016653 Add the cbtf spack build package. cbtf is the base package for the component based tool framework and is used for building and connecting cbtf components, including distributed components via the MRNet transfer mechanism. 2015-07-21 11:15:53 -05:00
Jim Galarowicz
a9c737f911 Add spack build package for Xerces-C which is a supporting package for the krell related projects. 2015-07-21 10:59:52 -05:00
Jim Galarowicz
f5093094eb Add the cbtf-argonavis project package file. cbtf-argonavis is a project based on CBTF that supports performance analysis of GPU applications. 2015-07-21 10:58:16 -05:00
Jim Galarowicz
15ec3cb3cd Add qt3 version support and a variant that controls patching the qt3 version for compile issues and answering yes to the license questions during build. 2015-07-21 10:51:53 -05:00
Jim Galarowicz
b4e0804b37 Add the latest version to the papi package. 2015-07-21 10:50:11 -05:00
Jim Galarowicz
64c8fd3fa1 Add krelloptions variant that is used to turn on a configuration option to build the thread safe lightweight libraries. 2015-07-21 10:49:15 -05:00
Jim Galarowicz
13421dc4aa Add patches that enable features added for krell related products. Update the package file to add a krellpatch variant to control adding the patches. 2015-07-21 10:20:05 -05:00
Jim Galarowicz
0591980cbe Add configuration change for krell related products, they expect the dyninst includes in include/dyninst. 2015-07-21 10:17:37 -05:00
Jim Galarowicz
d1f127d8ef Add changes for krell related products to binutils. Add a patch that installs libiberty_pic.a which krell products will favor/use. 2015-07-21 10:15:17 -05:00
Todd Gamblin
e097696390 Update concretize to check for more changes and iterate further. 2015-07-16 01:12:11 -07:00
Todd Gamblin
8828dbf2e8 Remove superfluous print in vim. 2015-07-14 23:48:07 -07:00
Todd Gamblin
2e90599283 Merge branch 'develop' of github.com:scalability-llnl/spack into develop 2015-07-14 23:43:59 -07:00
Todd Gamblin
6f8a4318c5 Remove python 2.6-incompatible format expression. 2015-07-13 18:25:18 +00:00
Tom Scogland
889485181e adding gnu global tags and exuberant ctags 2015-07-10 13:54:38 -07:00
Tom Scogland
fda208f6b8 adding YAPF (Yet Another Python Formatter) 2015-07-09 14:55:27 -07:00
Gregory L. Lee
2e37523428 for LaunchMON added latest git commit and dependences 2015-07-08 11:25:41 -07:00
Gregory L. Lee
ddfc276688 removed workaround 2015-07-02 15:14:30 -07:00
Florent Pruvost
e06d351f7a add cblas headers in install directory 2015-07-02 02:05:00 -07:00
Todd Gamblin
7625881cb3 Merge pull request #75 from alfredo-gimenez/develop 
Thanks!
 2015-07-02 01:27:47 -07:00
Todd Gamblin
6f94a2567b Add py-lockfile and py-python-daemon packages. 2015-07-02 00:40:25 -07:00
Alfredo Gimenez
25c1678004 Commented out old version 2015-06-23 17:39:23 -07:00
Alfredo Gimenez
9f27ddc256 New mpfr release invalidates previous download link (not sure where old version is...) 2015-06-23 17:36:57 -07:00
Todd Gamblin
a51d4afe3e Minor simplification (os.environ -> env) 2015-06-20 20:25:12 -07:00
Alfredo Gimenez
314ecc54fe Thrift python support 2015-06-18 17:29:16 -07:00
Alfredo Gimenez
f832719ceb Added silo 4.8 with HDF5 (for LULESH 2.0) 2015-06-18 12:31:01 -07:00
Alfredo Gimenez
0c028e24b4 Removed Lua dependency 2015-06-18 10:30:02 -07:00
Alfredo Gimenez
55e24548c3 Added Thrift (HBase management in C++) 2015-06-18 10:29:34 -07:00
Tom Scogland
912c29471a adding python pyelftools package 2015-06-17 15:19:46 -07:00
Todd Gamblin
607f263fbc Merge pull request #61 from alfredo-gimenez/develop 
Mitos 0.9.1
 2015-06-11 16:31:28 -07:00
Todd Gamblin
3cb10f92af Merge pull request #62 from trws/tmuxinator 
Partial ruby extension and tmuxinator package
 2015-06-11 16:31:15 -07:00
Todd Gamblin
9955df896b Merge pull request #63 from trws/silver-searcher 
adding package for the silver searcher
 2015-06-11 16:31:04 -07:00
Tom Scogland
a087fd71e4 Removing comment line 
Missed that the auto-generated comment line stuck around.
 2015-06-11 13:57:19 -07:00
Tom Scogland
d92ac2a6b2 Small ruby enhancement and tmuxinator package 
It is currently less painful to pull the source from github, compile it into a
gem, then install the gem, than it is to download a gem and install it.  This
still lacks an activation mechanism, but `spack use tmuxinator` is functional.
 2015-06-11 13:51:53 -07:00
Alfredo Gimenez
afe3c5b6bb Mitos 0.9.1 2015-06-11 11:02:51 -07:00
Tom Scogland
cd581d1d5a adding package for the silver searcher 2015-06-10 14:24:38 -07:00
Tom Scogland
2d465ffd10 partial upgrade to vim package 2015-06-10 14:14:31 -07:00
Todd Gamblin
04bcf43649 Merge pull request #58 from trws/python-cffi 
Python cffi
 2015-06-10 00:36:37 -07:00
Todd Gamblin
874326a1ad Merge pull request #56 from trws/uuid-task-and-taskd 
package files for libuuid, needed for flux and taskwarrior packages
 2015-06-10 00:35:30 -07:00
Tom Scogland
c8ad456fd6 nettle depends on gmp, without it the nettle build fails on gcc 4.9.2 2015-06-09 19:37:42 -07:00