Commit graph

15002 commits

Author SHA1 Message Date
Asher Mancinelli
da69f6eda8
Added support for disabling mumps in ipopt (#21592) 2021-03-05 11:32:11 -08:00
Martin Pokorny
4097a0c93f
casacore: use a modern CMake's version of FindHDF5.cmake (#21882)
Remove casacore's old version of the file with a package patch()
function, and depend on a modern CMake for the build.

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-05 16:05:37 +00:00
iarspider
ad9db839cf
syscalc: fix recipe and URL (extension) (#22112) 2021-03-05 16:21:12 +01:00
David Böhme
098b7b2e50
Add Caliper 2.5.0 and Adiak 0.3.0 (#20718) 2021-03-05 15:30:57 +01:00
emai-imcs
71dd8ed265
FEniCS: update of packages to support 2019.1.0 (#21207) 2021-03-05 07:27:35 -07:00
Vasileios Karakasis
3b1b51e90d
reframe: add v3.4.2 and v3.4.1, enable autocompletion (#22114) 2021-03-05 13:57:21 +00:00
Mathew Cleveland
ca3171d002
py-oppy: add v0_1_5 (#22061)
Co-authored-by: Cleveland <cleveland@lanl.gov>
2021-03-05 06:09:35 -07:00
thelfer
aa8079556a
tfel: add v3.3.1, fix typo in checksum of v3.4.0 (#22062) 2021-03-05 12:27:05 +01:00
iarspider
ea45b95039
pythia6: extra patch provided by CERN's EP-SFT (#22055) 2021-03-05 04:14:36 -07:00
snehring
daf2ef9682
mcl: fixing missing extern in global variables (#22094)
Revealed by GCC 10 see https://gcc.gnu.org/gcc-10/porting_to.html
2021-03-05 12:01:18 +01:00
darmac
3c1b305752
rtags: add v2.20 (#22068) 2021-03-05 11:28:45 +01:00
Valentin Volkl
70cd948852
dd4hep: add v0.16 and geant4units variant (#22064) 2021-03-05 11:28:05 +01:00
Mark W. Krentel
290df7a14a
hpcviewer: add version 2021.03 (#22107) 2021-03-05 10:08:09 +00:00
Tomoyasu Nojiri
d7c4f7b7e6
xfsprogs: add --with-systemd-unit-dir option (#22075) 2021-03-05 10:39:36 +01:00
Tomoyasu Nojiri
d3b10b04c1
freeipmi: add --with-systemdsystemunitdir option (#22096) 2021-03-05 10:38:19 +01:00
Tomoyasu Nojiri
97afb34ac3
keepalived: add --with-systemdsystemunitdir option (#22098) 2021-03-05 10:37:39 +01:00
Tomoyasu Nojiri
dc275e1f83
moosefs: add --with-systemdsystemunitdir option (#22099) 2021-03-05 10:36:32 +01:00
Tomoyasu Nojiri
346e6b3b77
rrdtool: add --with-systemdsystemunitdir option (#22100) 2021-03-05 10:30:34 +01:00
Adam J. Stewart
5fb0ff3906
py-torch: add v1.8.0 (#22101) 2021-03-05 10:21:39 +01:00
Adam J. Stewart
4261de5434
py-torchvision: add v0.9.0 (#22102) 2021-03-05 10:21:15 +01:00
Axel Huebl
c2925a1704
SLATE: Default ~cuda (#22110)
Same as BLAS++ since more GPU backends are coming and cuda
is usually off as a variant default in Spack, unless requested.
2021-03-05 10:11:16 +01:00
Tomoyasu Nojiri
03756583c3
py-python-ldap: add link dependency on cyrus-sasl (#22105) 2021-03-05 10:07:02 +01:00
Mark W. Krentel
c6b632a1f9
hpctoolkit: add version 2021.03.01 (#22106)
1. Add version 2021.03.01.
2. Cleanup the binutils dependencies now that 2.35.2 and 2.36 are available.
3. Require gcc 7.x or later for current 2021 version.
4. Simplify the xz depends to always require +pic.
   This works around a glitch in the original concretizer.
2021-03-05 10:06:11 +01:00
h-denpo
c460013a91
flexi: allow building on aarch64 (#22109) 2021-03-05 10:02:15 +01:00
Valentin Volkl
e112a26513
py-awkward1: add v1.1.2 (#22081)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-05 09:52:57 +01:00
Larry Knox
8bdd6c6f6d
hdf5: add v1.8.22. (#22089) 2021-03-04 20:04:52 +00:00
darmac
10c7831366
Add new package: perl-test-more (#22076)
* Add new package: perl-test-more

* perl-test-more: refine description
2021-03-04 10:04:57 -08:00
darmac
459b991e78
perl-test-output: new package at v1.033 (#22077) 2021-03-04 18:11:28 +01:00
Michael Kuron
7f01d1dc40
py-ase: add a build dependency on py-setuptools (#22078) 2021-03-04 18:09:37 +01:00
darmac
e9dfc50d1b
py-sqlparse: add v0.4.1 (#22080) 2021-03-04 17:44:33 +01:00
Dr. Christian Tacke
04cd884c95
poke: new package at v1.0 (#22085) 2021-03-04 17:41:48 +01:00
Dr. Christian Tacke
71954d9665
xrootd: add v5.1.0 (#22084) 2021-03-04 17:39:58 +01:00
Tomoyasu Nojiri
d7dd12edab
unifyfs: Fix strncpy build error of version 0.9.1 (#22066) 2021-03-04 07:46:18 -08:00
Axel Huebl
49c015e391
BLAS++: CUDA default (false) (#22067)
For opt-in packages in Spack, its common that the `cuda` variant
is disabled by default.

This also simplifies downstream usage in multi-variants for
backends in user code.
2021-03-04 12:07:48 +01:00
Mosè Giordano
7e143bab6a
libblastrampoline: Add version 3.0.2 (#22065) 2021-03-04 11:05:32 +01:00
darmac
f1d0a819e9
py-adb-enhanced: update version to fix runtime error (#22036)
* py-adb-enhanced: update version to fix runtime error

* py-adb-enhanced: fix dependencies
2021-03-03 20:57:41 -06:00
Andrew W Elble
631598014a
py-pycuda: new version 2020.1 (#22057)
* py-pycuda: new version 2020.1

* dep updates

* deal with lib/lib64 issue
2021-03-03 22:06:02 +00:00
Frédéric Simonis
6d54df1ba4
precice: add pkgconfig as a build dependency (#22059) 2021-03-03 17:10:00 +00:00
Anton Kozhevnikov
58d9f5c114
libxc: add v5.1.2 (#22056) 2021-03-03 16:52:41 +00:00
ajaust
ac66624196
py-pyprecice: Add version 2.1.1.2 and 2.2.0.1 (#22012) 2021-03-03 07:44:04 -06:00
Adam J. Stewart
d343304bdc
py-pandas: add v1.2.3 (#22048) 2021-03-03 14:31:22 +01:00
Massimiliano Culpo
796588b2fd
zig: add new package at v0.7.1 (#22046) 2021-03-03 13:30:41 +01:00
Olivier Cessenat
25fb753cd2
New Package: keepassxc (#21878) 2021-03-02 18:37:18 -08:00
Mark Olesen
0c38c86403
openfoam: disable FPE handling for Fujitsu compiler (#21769)
- as outlined in merge-request #21336 some clang compilers
  can trigger erroneous floating point exceptions.

  OpenFOAM normally traps FPE, but disable this in the etc/controlDict
  for specific compilers:

      change "trapFpe digit;" -> "trapFpe 0;"

  Eliminate previous use of FOAM_SGIFPE env variable in favour of
  using the etc/controlDict setting - cleaner and robuster.

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
2021-03-02 22:01:20 +01:00
rexcsn
16c07e6abd
aws-parallelcluster v2.10.2 (#22047)
Signed-off-by: Rex <shuningc@amazon.com>
2021-03-02 13:55:49 -06:00
Desmond Orton
8e1b62ee68
New package at r-spades at 2.0.6 (#21784) 2021-03-02 11:10:02 -07:00
Dr. Christian Tacke
c7306db061
geant4(-data): Add version 10.7.1 (#22044)
Notably, this patch release adds a new version of
g4particlexs.
2021-03-02 16:57:46 +00:00
Seth R. Johnson
136fa9c203
vecgeom: add v1.1.12 (#22041) 2021-03-02 14:29:16 +00:00
Harmen Stoppels
dc5022a9d9
openssl: introduce ~docs to make installation smaller (#21962) 2021-03-02 14:58:59 +01:00
Phil Carns
eeff906ccc
bmi: update url and repo location (#21992) 2021-03-02 10:38:52 +00:00
Phil Carns
ae19ddbfcb
mochi-margo: the official repo is on github now (#22029) 2021-03-02 10:28:33 +00:00
Eisuke Kawashima
1e0d311547
dftd4: add new package at v3.1.0 (#22007) 2021-03-02 10:11:45 +00:00
Massimiliano Culpo
61e00ac1e1
nim: add v1.4.4 (#22004) 2021-03-02 09:42:05 +00:00
a-saitoh-fj
71df23406d
eigenexa : use an interpreter explicitly to execute test script (#21896) 2021-03-02 10:02:56 +01:00
ketsubouchi
60e64bac0a
virtuoso: add new package (#21793) 2021-03-02 09:50:49 +01:00
Olivier Cessenat
880bb06cbf
octave: provides fltk with opengl, adds qscintilla (#21903) 2021-03-02 09:47:00 +01:00
h-denpo
fac785914b
py-fava: Removed the importlib dependencyfrom py-fava. (#22035)
It isn't needed.
2021-03-01 23:10:02 -06:00
h-denpo
9575531f2a
py-importlib: Python 2.7 is needed to build. (#22034)
* py-importlib: Python 2.7 is needed to build.

added     depends_on('python@2.7.0:2.7.99')

* Update var/spack/repos/builtin/packages/py-importlib/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-03-01 23:09:31 -06:00
h-denpo
83ca1b153f
py-azureml-dataprep-rslex: install only x86_64 (#22033)
* py-azureml-dataprep-rslex: install only x86_64

* py-azureml-dataprep-rslex:  Moved the conflit part.
2021-03-02 03:39:56 +00:00
Desmond Orton
671878740c
Version update with url to checksum all versions (#22027) 2021-03-01 16:23:49 -08:00
Paul Ferrell
88f7a00f2d
Paraview compatibility with PugiXML varies by version. (#21732) 2021-03-01 16:06:34 -08:00
Ethan Stam
b2e0bc1ae7
paraview: add python to rpath (#21768) 2021-03-01 16:00:44 -08:00
Paul
bd94458552
Added Go versions 1.16 and 1.15.8 (#22016) 2021-03-01 15:22:12 -08:00
eugeneswalker
36ae5ac6ef
kokkos package: +cuda requires +wrapper when compiler is not clang (#21941)
This check is performed in cmake_args rather than with a 'conflicts'
statement because matching on !clang (i.e. any compiler that is not
clang) cannot currently be done with our spec syntax.
2021-03-01 14:54:14 -08:00
mic84
d7595d6703
amrex: new version 21.03 (#22028) 2021-03-01 14:46:37 -08:00
ketsubouchi
f1ef260b47
alps: add smoke test (#21834) 2021-03-01 14:40:01 -08:00
Andrew W Elble
4d37b384f5
py-torch-geometric: new version 1.6.3 (#22024)
* py-torch-geometric: new version 1.6.3

* setuptools
2021-03-01 20:33:23 +00:00
Simon Frasch
df42c0b4b6
spla: added version 1.3.0 (#22013) 2021-03-01 20:15:16 +00:00
Andrew W Elble
f5beee76c8
py-tensorboardx: update package (#22026)
v2.1
2021-03-01 13:58:29 -06:00
Andrew W Elble
20fdab7f02
py-yacs: new package (#22020) 2021-03-01 13:56:54 -06:00
mic84
651df70213
amrex: must use AMReX_CUDA_ARCH for version > 20.11 (#22025) 2021-03-01 11:45:04 -08:00
William Downs
1ac2cc5081
intel-mpi: add version 2019.9.304 and 2019.10.317 (#22017) 2021-03-01 11:40:41 -08:00
Andrew W Elble
81b77873e7
py-lap: new package (#22021)
* py-lap: new package

* dep versions
2021-03-01 19:24:36 +00:00
Andrew W Elble
987b5a5b6f
py-motmetrics: new package (#22023)
* py-motmetrics: new package

* dep updates
2021-03-01 19:03:03 +00:00
Andrew W Elble
1abfebb5e9
py-cython-bbox: new package (#22022)
* py-cython-bbox: new package

* pypi url fix
2021-03-01 19:01:57 +00:00
Mark W. Krentel
14c1d58b5a
binutils: add versions 2.35.2 and 2.36.1 (#22019)
Starting with 2.36, the Makefiles are missing some dependencies for
linking libctf and thus require serial make install.
2021-03-01 08:53:55 -08:00
AMD Toolchain Support
afb7e57d20
ucx: added variants to support IB, mlx etc (#21876)
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-03-01 16:11:37 +01:00
Adam J. Stewart
c529ccaab0
py-geopandas: add v0.9.0 (#22005) 2021-03-01 14:35:16 +01:00
h-denpo
890a93bbcd
gchp: patch for aarch64 (#22010) 2021-03-01 09:06:08 +01:00
Mosè Giordano
62f8087716
libblastrampoline: Add version 3.0.1 (#22002) 2021-02-27 18:31:59 +01:00
Robert Pavel
d5f50203d1
Removed MPI variant from ebms (#21938) 2021-02-27 13:15:57 +01:00
iarspider
5abc7e59d1
Rivet updates and improvements (#21843) 2021-02-27 13:13:08 +01:00
iarspider
edeb6c52f0
Openblas: add experimental BIGNUMA flag (#21393) 2021-02-27 13:06:29 +01:00
Adam J. Stewart
ede100bf16
kcov: elfutils not needed on macOS (#21993) 2021-02-26 19:25:59 -06:00
Satish Balay
a87aa49fbf
petsc/petsc4py/slepc: switch default git branch from 'master' to 'main' (#22001) 2021-02-27 01:17:37 +00:00
Sebastian Mobo
4f84721dc1
boost: Patch B2 bootstrap step to use correct toolchain (#21408) 2021-02-26 17:46:37 -06:00
Andrew W Elble
f2f58b70b1
nccl-tests: respect cuda_arch variant during build (#21995) 2021-02-26 15:38:20 -08:00
Ryan Viertel
f957f1936c
adds flag to turn off NLOPT_OCTAVE in CMAKE when -octave (#21997) 2021-02-26 15:35:09 -08:00
Desmond Orton
5492e549a5
New package r-spades-tools at 0.3.6 (#21783) 2021-02-26 23:25:47 +00:00
eugeneswalker
590457cf7f
amrex: use right cmake_args for @develop; depends_on(hypre) for link (#21892)
* amrex package: use right cmake_args for @develop; depends_on(hypre)

* add explicit depends_on for petsc, for link, when +petsc
2021-02-26 13:53:31 -08:00
mic84
2fd8612f21
amrex: +hypre and +petsc do not need +fortran from version 20.08 (#21994) 2021-02-26 13:52:57 -08:00
Desmond Orton
f22caeca36
Package/r circstats (#21966) 2021-02-26 14:57:56 -06:00
iarspider
1a45bdb036
FastJet: fix patch level (#21936) 2021-02-26 19:21:08 +00:00
Adam J. Stewart
a6396d6190
py-metpy: add new package (#21971) 2021-02-26 18:51:16 +00:00
Olivier Cessenat
2484ed0281
Qscintilla: added v2.12.0, fixed build (#21902) 2021-02-26 18:13:25 +00:00
Olivier Cessenat
5578c07b51
asciidoc: sourceforge a2x needs python2, adds more recent for py3 (#21807)
* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: making python 2.3 to 2.7 able to cope with asciidoc

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3

* asciidoc: current sourceforge a2x needs python2, new github release python3
2021-02-26 10:04:36 -06:00
Adam J. Stewart
046861c4ef
xkbcomp: add v 1.4.4 (#21981) 2021-02-26 15:55:06 +00:00
Dan Lipsa
18f094efe9
sensei: add versions and fix dependencies (#21452)
* Fix sensei@develop

Should work with all options but libsim.
Current releases don't work with ~catalyst
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/240
for the fix for develop.
Current releases work only with paraview 5.7 and 5.6
See
https://gitlab.kitware.com/sensei/sensei/-/merge_requests/239
for the fix for develop (which works with 5.9)

* Fix libsim.

* Fix warnings.

* Fix python runtime.

* Many changes:

* Reworked cmake options top use the CMakePackage option helpers
* Simplified and consolidated options
* Replaced adios with adios2 variant
* Added vtkm variant (not yet working)

* paraview: Fix downstream consumers getting the wrong FindMPI

* vtk: Fix downstream consumers getting the wrong FindMPI

* Add +ascent, +adios2; remove +adios; variants off by default

* Fix catalyst python logic

* sensei: cleanup formatting

Co-authored-by: Chuck Atkins <chuck.atkins@kitware.com>
2021-02-26 10:52:41 -05:00
Tomoyasu Nojiri
b6ac3bb6d7
ncl: allow building on aarch64 (#21984) 2021-02-26 15:39:08 +00:00
eugeneswalker
c2784b2d41
amr-wind: new package (#21883)
* amr-wind: new package

* amr-wind: simplify cuda_arch mapping

* simplify
2021-02-26 07:15:08 -08:00