Commit graph

24357 commits

Author SHA1 Message Date
Sebastian Schmitt
6d22e9cd7b
Update pathos (#24636)
* Update pathos

* Add build and run
2021-07-12 10:01:43 -05:00
Sebastian Schmitt
1784b05eaf
Update multiprocess (#24634)
* Update multiprocess

* Add build and run
2021-07-12 10:01:13 -05:00
Adam J. Stewart
872785db16
py-sphobjinv: add new package (#24790) 2021-07-12 13:40:32 +02:00
Erik Schnetter
4c7aed5d57
lorene, pgplot: new packages (#24549) 2021-07-12 13:35:43 +02:00
Christoph Conrads
e957c58a1e
Expat: add version 2.4.0, 2.4.1; fix CVE-2013-0340 (#24669)
* Expat: add version 2.4.0, 2.4.1; fix CVE-2013-0340

fixes #24628

* E4S pipeline: update pinned Expat version
2021-07-11 19:43:37 +00:00
Matthew Fernandez
112c1751d7
docs: fix reference to count of system packages (#24821)
015e29efe1 that introduced this section to the
documentation said “two” here instead of the actual count, three.
9f54cea5c5 then added a fourth, BLAS/LAPACK.
Rather than trying to keep this leading count in sync, this change just replaces
the wording with something more generic/stable.
2021-07-11 18:49:19 +00:00
Scott Wittenburg
e0017a6666
Fix out of date remote spec.yamls while updating the index (#24811) 2021-07-10 06:49:09 +00:00
Todd Gamblin
084bafe18c coverage: move config from .coveragerc to pyproject.toml
Getting rid of another top-level file.

`coverage.py` has supported `pyproject.toml` since version 5.0, and
all versions of coverage so far work with python 2.7. We just need to
ensure that a version of coverage with the `toml` extra is installed
in the test environment.

I tested this with `coverage run`, `coverage report`, and `coverage html`.
2021-07-09 22:49:47 -07:00
Vanessasaurus
775c8223c3
debug: initial global debug flag support (#24285)
The developer can export environment variables that
are seen by the compiler wrapper to then add the flags
2021-07-09 21:22:26 -04:00
Greg Becker
ebf2076755
spec.splice: properly handle cached hash invalidations (#24795)
* spec.splice: properly handle cached hash invalidations

* make package_hash a cached hash on the spec
2021-07-10 01:16:48 +00:00
Christoph Junghans
556975564c
votca-tools: fix build with newer gcc/glibc (#24815) 2021-07-10 01:05:30 +00:00
Massimiliano Culpo
d14520d6d8
docker: remove boto3 from CentOS 6 since it requires and updated pip (#24813) 2021-07-10 00:45:30 +00:00
Axel Huebl
78f65e7ce0
openPMD-api: rename develop (#24810)
* openPMD-api: rename develop

Rename to match known Spack version comparison schemes:
```
develop>main>master>head>trunk>9999>0>z>a
```

Currently, the hdf5 patch that is pre-0.14.0 is also applied to
`dev`, which naturally fails (already applied).

* fix dev in warpx
2021-07-09 22:43:28 +00:00
Asher Mancinelli
c9fe3af92d
toml11: New package (#24620) 2021-07-09 14:13:22 -04:00
Manuela Kuhn
c6ffec1d78
py-markupsafe: add 2.0.1 (#24766)
* py-markupsafe: add 2.0.1

* Update var/spack/repos/builtin/packages/py-markupsafe/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09 12:04:36 -06:00
Zack Galbreath
0e177cb95f
ci: tolerate 'InvalidAccessKeyId' (#24741)
Add 'InvalidAccessKeyId' to the list of error messages we expect
and tolerate in push_mirror_contents()
2021-07-09 09:39:16 -07:00
QuellynSnead
72585afcef
hypre: Add new versions (#24625)
* hypre: Add releases 2.21.0 and 2.22.0
2021-07-09 12:25:36 -04:00
Chris White
4037a94d1e
Remove unnecessary compiler id override for XL (#24799) 2021-07-09 09:20:54 -07:00
Adam J. Stewart
b4e757dc35
py-fuzzywuzzy: add new package (#24789) 2021-07-09 17:51:52 +02:00
darmac
d734df705a
libnids: add new package (#22153) 2021-07-09 17:49:10 +02:00
Massimiliano Culpo
2a858f8f3d
docker: Fix CentOS 6 build on Docker Hub (#24804)
This change make yum usable again on CentOS 6
2021-07-09 15:45:46 +00:00
Seth R. Johnson
0edc55adc2
scotch: default to not installing vendored metis/parmetis (#24785) 2021-07-09 11:30:00 -04:00
Hadrien G
7b7f758db3
acts: add v9.01.00 (#24570) 2021-07-09 17:13:35 +02:00
Robert Mijakovic
8cc54036b5
c-blosc2: adds v2.0.1 (#24581)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-07-09 17:12:00 +02:00
Miroslav Stoyanov
b3bdc2ef38
heffte: add v2.1.0 (#24599) 2021-07-09 17:11:13 +02:00
Robert Mijakovic
a53f4c36c6
util-macros: new versions, 1.19.2/3 (#24612)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-07-09 17:02:45 +02:00
Gabriel Rockefeller
4682ff0cc4
global: add v6.6.6 (#24642) 2021-07-09 16:59:23 +02:00
Manuela Kuhn
fabe86be96
py-bids-validator: add new package (#24677) 2021-07-09 16:58:44 +02:00
Manuela Kuhn
9797c8f060
py-sqlalchemy: add 1.4.20 (#24676)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09 16:58:26 +02:00
Dylan Simon
02c5c76f0b
pthreadpool: enable shared libraries (#24657)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09 16:58:02 +02:00
Simon Frasch
07fab46262
spla: add v1.5.1 (#24661) 2021-07-09 16:54:49 +02:00
Simon Frasch
0edb7937e7
spfft: add v1.0.4 (#24662) 2021-07-09 16:54:37 +02:00
Paul Kuberry
46fa8481d9
trilinos: add a neww maintainer (#24670) 2021-07-09 16:54:06 +02:00
Manuela Kuhn
a2a2d6ab7e
py-aniso8601: add new package (#24672) 2021-07-09 16:53:01 +02:00
Manuela Kuhn
aaeaa0516d
py-jeepney: add v0.6.0 (#24674) 2021-07-09 16:52:49 +02:00
Manuela Kuhn
463c704265
py-jupyterlab-server: add v2.6.0 (#24779) 2021-07-09 14:35:26 +00:00
Manuela Kuhn
cd118341e9
py-nbclassic: add new packageg (#24778) 2021-07-09 14:21:56 +00:00
Gregor Daiß
2d1631c9fd
sgpp: add v3.4.0 (#24678) 2021-07-09 16:09:35 +02:00
Manuela Kuhn
cdd6c71f66
py-greenlet: add v1.1.0 (#24682) 2021-07-09 16:09:13 +02:00
figroc
7d334471d3
protobuf: add versions up to 3.17.3 (#24691) 2021-07-09 16:05:16 +02:00
Sebastian Schmitt
8cb3253a04
Update ppft (#24632) 2021-07-09 08:16:39 -05:00
Sebastian Schmitt
9add3182c7
Add py-salib (#24218) 2021-07-09 08:15:21 -05:00
Enrico Usai
f830585994
aws-parallelcluster: add v2.11.0 (#24648) 2021-07-09 08:13:57 -05:00
Vasileios Karakasis
2e80b60a04
Add ReFrame 3.6.3 (#24664) 2021-07-09 14:29:04 +02:00
Adam J. Stewart
ace28e2ef5
pinentry: add gui multi-valued variant (#24717) 2021-07-09 14:26:02 +02:00
Manuela Kuhn
4a44f023e8
py-jupyter-server: add new package (#24777) 2021-07-09 11:37:08 +00:00
Olivier Cessenat
1b26c47cb8
latex2html: adding the famous LaTeX to HTML converter (#24750) 2021-07-09 13:17:43 +02:00
Manuela Kuhn
aeab3b2872
py-jupyter-packaging: add new package (#24751) 2021-07-09 13:16:43 +02:00
Cameron Smith
727f43f69f
simmetrix-simmodsuite: add v16.0-210623 and maintainer (#24763) 2021-07-09 13:08:04 +02:00
Robert Mijakovic
ba2e186f31
llvm: add v12.0.1 (#24803)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-07-09 13:06:04 +02:00