hlrs-software-stack/spack

Author	SHA1	Message	Date
alalazo	30c3047482	gromacs : added package	2016-02-19 12:39:38 +01:00
Todd Gamblin	3c1aa9a4ad	Merge pull request #298 from epfl-scitas/refactoring/resource_directive refactoring proposal : composite for Stage and FetchStrategy	2016-02-18 23:13:12 -08:00
Gregory L. Lee	19d10291bf	modify compiler commands in python config files, fix for #431	2016-02-18 15:45:29 -08:00
Joseph Ciurej	6cd76d69c3	Fixed the "+shared" variant in the "hdf5" package.	2016-02-17 11:51:24 -08:00
Joseph Ciurej	0388093f7a	Changed the hdf5 "+static" variant to become the "+shared" variant.	2016-02-16 17:33:19 -08:00
Joseph Ciurej	fca7ef2f7b	Moved "Triangle" to "triangle" to be more in line with Spack package naming conventions.	2016-02-16 17:23:37 -08:00
Joseph Ciurej	8cab10214e	Added the installation files for the "ExodusII" package. Added the "+static" variant to "hdf5" to enable "ExodusII" support.	2016-02-16 16:43:24 -08:00
Joseph Ciurej	09254014b1	Added the installation files for the "TetGen" package.	2016-02-16 13:24:01 -08:00
Joseph Ciurej	3c8bbeafc7	Added the installation files for the "Triangle" package.	2016-02-16 13:01:18 -08:00
Joseph Ciurej	9a6221ea40	Added the installation files for the "ndiff" package.	2016-02-16 12:47:14 -08:00
Joseph Ciurej	db50f52bbc	Adding the "Crypto++" package installation files.	2016-02-16 11:40:00 -08:00
Todd Gamblin	9e4671a4b4	Merge pull request #340 from adamjstewart/features/xz Remove unnecessary URLs	2016-02-16 10:24:42 -08:00
Adam J. Stewart	bf162e60f1	Add latest version	2016-02-15 10:53:50 -06:00
Todd Gamblin	d8c0edcc81	Minor code cleanup for gcc.	2016-02-14 14:40:25 -08:00
Todd Gamblin	63911d4165	Merge pull request #354 from eschnett/eschnett/libedit libedit depends on ncurses	2016-02-12 10:33:08 -08:00
Erik Schnetter	8e33cc1ae1	Properly wrap all long lines	2016-02-12 13:11:45 -05:00
Erik Schnetter	77c17e1d92	Since my last patch didn't get traction, here is a new approach to building gcc on Darwin: - Add a variant specifying whether to build with binutils, defaulting to true - Auto-detect whether this is Darwin; if so, set binutils and gold defaults to false, as they don't work on Darwin - Disable Go, which doesn't build on Darwin - Clean up handling configure options	2016-02-12 12:52:47 -05:00
alalazo	247a4bc751	mpich : added back MPI_F90	2016-02-12 12:15:09 +01:00
Massimiliano Culpo	70985170e5	qe : compiled on rhle6	2016-02-12 12:08:31 +01:00
Erik Schnetter	d7f674ce96	libedit depends on ncurses	2016-02-11 14:53:20 -05:00
alalazo	e8704433de	espresso : added directories to search path	2016-02-11 18:57:40 +01:00
alalazo	b272a8881b	espresso : fixed dependency handling	2016-02-11 18:18:05 +01:00
alalazo	ca3cdb4458	espresso : current working tree	2016-02-11 17:45:09 +01:00
alalazo	157ec210a7	espresso : synchronized with current develop	2016-02-11 13:05:31 +01:00
alalazo	e7454132a2	Merge branch 'develop' of https://github.com/LLNL/spack into packages/espresso	2016-02-11 13:03:47 +01:00
Todd Gamblin	bcf705b85e	Merge pull request #432 from RemoteConnectionManager/paraview_fix Paraview fix	2016-02-10 13:59:08 -08:00
Todd Gamblin	e23c260cb0	Merge pull request #402 from epfl-scitas/bugfix/netlib-scalapack Bugfix: netlib-scalapack does not work with all versions of python	2016-02-10 11:40:31 -08:00
Luigi Calori	d7b3ed08ab	add variant to select OpenGL2 Paraview backend	2016-02-10 15:40:05 +01:00
Luigi Calori	a1bd65550e	fix a reported hash mismatch on netcdf-4.4.0 tar download	2016-02-10 15:17:54 +01:00
Luigi Calori	fe8aca630c	add a variant to Qt for make dependency on mesa swlwctable	2016-02-10 14:58:00 +01:00
Luigi Calori	f729cf621a	fixing qhull: seems that dependency on cmake is essential when it is used	2016-02-10 13:29:36 +01:00
alalazo	71a25a109a	arpack-ng : added package	2016-02-05 11:00:37 +01:00
Todd Gamblin	15324c276f	Merge pull request #426 from epfl-scitas/packages/suitesparse Added package : SuiteSparse	2016-02-04 18:08:07 -07:00
alalazo	e2a95d4b50	eigen : added support for SuiteSparse	2016-02-04 16:27:26 +01:00
alalazo	e3a0e1881d	suitesparse : basic implementation	2016-02-04 16:00:39 +01:00
alalazo	031c292136	dakota : basic installation	2016-02-04 13:48:21 +01:00
Adam J. Stewart	e1b3c286ef	Add url for cmake, simplify url_for_version	2016-02-03 16:28:09 -06:00
Todd Gamblin	f38851b73d	Merge remote-tracking branch 'github/pull/99' into develop Conflicts: var/spack/repos/builtin/packages/cmake/package.py	2016-02-03 14:24:59 -07:00
Todd Gamblin	72ca311f17	Merge pull request #414 from epfl-scitas/issues/trilinos_385 fix : trilinos and dependencies	2016-02-03 11:42:53 -07:00
Todd Gamblin	c5455ceee5	Merge pull request #417 from mathstuf/hdf5-unsupported-flag hdf5: always pass the unsupported flag	2016-02-03 08:56:30 -07:00
Todd Gamblin	5a3338323c	Merge pull request #419 from adamjstewart/features/libgpg-error Add latest libgpg-error version	2016-02-03 08:56:06 -07:00
Todd Gamblin	8a4b86dac9	Merge pull request #420 from adamjstewart/features/qhull Add latest qhull version	2016-02-03 08:55:32 -07:00
Todd Gamblin	bc4bf71d8f	Merge pull request #421 from adamjstewart/features/phonopy Add Phonopy and PyYAML Python modules	2016-02-03 08:54:22 -07:00
Todd Gamblin	fe358e24e3	Merge pull request #423 from epfl-scitas/packages/opencv Added package : OpenCV	2016-02-03 08:52:58 -07:00
alalazo	44c1b06609	opencv : added package	2016-02-03 13:36:25 +01:00
alalazo	587d356d6e	openssl : added logic to version computation. The package now warns user if he depends on an old version of the library	2016-02-03 08:59:26 +01:00
Adam J. Stewart	d2fb1522a3	Add Phonopy and PyYAML Python modules	2016-02-02 12:54:24 -06:00
Adam J. Stewart	ab3698e3a4	Add latest qhull version	2016-02-02 11:42:31 -06:00
Adam J. Stewart	422e87badb	Add latest libgpg-error version	2016-02-02 10:57:58 -06:00
Ben Boeckel	2b140b9a34	hdf5: default +unsupported to on This flag can end up being required if a dependency tree ends up needing hdf5+cxx+parallel, but nothing turns it on. Since the core spack code puts this together, it ends up that the end user needs to specify it manually. Instead, just assume an unsupported configuration (since these are useful setups) and if anyone wants to seek upstream support, masking the flag can be done.	2016-02-01 11:46:33 -05:00
alalazo	c8d2275c06	opencv : reverted url_for_version modifications	2016-02-01 10:56:48 +01:00
alalazo	e67507478a	opencv : reverted url_for_version modifications	2016-02-01 10:55:39 +01:00
alalazo	b0707a61e7	Merge branch 'develop' of https://github.com/LLNL/spack into issues/trilinos_385	2016-02-01 10:54:17 +01:00
Todd Gamblin	9eb037bc87	Merge pull request #415 from adamjstewart/features/hwloc Checksum fix for hwloc	2016-02-01 02:41:47 -07:00
Todd Gamblin	140510fedf	Merge pull request #408 from adamjstewart/features/fish Modify url settings for fish package	2016-02-01 02:39:54 -07:00
alalazo	360abb070a	netcdf : fixed typo in configure option openssl : smarter URL computation	2016-02-01 08:33:03 +01:00
Gregory L. Lee	3bf6fed7b3	updated openssl version	2016-01-29 11:29:27 -08:00
Adam J. Stewart	d14d50beb6	Checksum fix for hwloc	2016-01-29 09:47:57 -06:00
Abhishek Kulkarni	74225544c6	Rename the hpx package to hpx-5.	2016-01-29 10:35:54 -05:00
Massimiliano Culpo	cd54793913	Cleaning up	2016-01-29 11:42:06 +01:00
alalazo	b574c4ad51	trilinos : updated package to meet changes in dependencies	2016-01-29 08:57:07 +01:00
Abhishek Kulkarni	5907cc0de5	Merge remote-tracking branch 'upstream/develop' into develop	2016-01-29 00:32:34 -05:00
Abhishek Kulkarni	2bea7f8d69	Add the HPX-5 package.	2016-01-29 00:29:20 -05:00
Todd Gamblin	9fb5ddbb4c	Merge pull request #411 from adamjstewart/features/pnetcdf Add PnetCDF and M4 packages	2016-01-28 20:52:59 -07:00
David Beckingsale	d9548c01af	Correct package URL	2016-01-28 15:47:37 -07:00
Adam J. Stewart	4f34031534	Add PnetCDF and M4 packages	2016-01-28 15:41:58 -06:00
David Beckingsale	7e65f4da82	Add the Caliper package	2016-01-28 13:22:56 -08:00
Gregory L. Lee	0e52c30bb8	added py-wheel package	2016-01-28 10:42:46 -08:00
Adam J. Stewart	06f3cc33ba	Modify url settings for fish package	2016-01-28 11:41:12 -06:00
alalazo	07bb6fef01	resource directive : now works with all the fetch strategies available	2016-01-28 10:58:56 +01:00
Adam J. Stewart	6122642b81	More NetCDF changes	2016-01-27 16:16:33 -06:00
Nicolas Richart	f1d8f30342	Bug fix: precedence in % operator seems to change depending in the python version	2016-01-27 10:54:41 +01:00
Todd Gamblin	90750f59c1	Merge pull request #400 from adamjstewart/features/netcdf Extensive modifications to NetCDF package	2016-01-26 19:31:14 -07:00
Tom Scogland	23af31cb1c	adding the cmocka unit testing library	2016-01-26 17:55:32 -08:00
Todd Gamblin	c344b30fc4	Merge pull request #342 from adamjstewart/features/hwloc Add url_for_version function to calculate url	2016-01-26 16:01:17 -08:00
Todd Gamblin	d7bd023afa	Merge pull request #339 from adamjstewart/features/hdf Add HDF package	2016-01-26 15:51:57 -08:00
Adam J. Stewart	81ccba202c	Make szip a variant	2016-01-26 15:38:22 -06:00
Adam J. Stewart	c6bb00085f	Extensive modifications to NetCDF package	2016-01-26 12:04:48 -06:00
Adam J. Stewart	1d18f2031c	Add szip variant	2016-01-25 14:57:33 -06:00
Matthew LeGendre	fa888a4ba1	Merge branch 'develop' into features/external-packages Conflicts: lib/spack/spack/cmd/mirror.py lib/spack/spack/concretize.py lib/spack/spack/config.py lib/spack/spack/spec.py lib/spack/spack/stage.py var/spack/packages/mvapich2/package.py	2016-01-25 10:52:17 -08:00
Todd Gamblin	b6731ea47c	Merge pull request #336 from scheibelp/features/boost-additive-libs additive compilation of boost libraries	2016-01-22 14:09:19 -08:00
Peter Scheibel	a653d2f5e2	Slightly more robust approach for setting defaults for noinstall_libs	2016-01-22 13:43:16 -08:00
Peter Scheibel	9f99ee61c7	1. added default install libs (atomic, test, locale, program_options) 2. clarify comment for default_noinstall_libs 3. renamed regex_icu variant to icu_support (both the locale and regex libs can use it) 4. explicitly set b2 install ICU_PATH when regex_icu is activated	2016-01-22 13:25:45 -08:00
Alfredo Gimenez	10de5a3ec7	Patch fix for boost@1.60.0%gcc@4.4.7	2016-01-22 13:02:18 -08:00
Peter Scheibel	4a55b97d11	Fixed reference	2016-01-22 12:37:12 -08:00
Peter Scheibel	2e58bc3113	Sticking with additive approach but now most libraries are installed by default.	2016-01-21 19:57:49 -08:00
Erik Schnetter	2f70c842b8	Disable patch that was merged into upstream in 1.10.2	2016-01-21 14:13:39 -05:00
Erik Schnetter	6b3f023d98	Update OpenMPI to 1.10.2	2016-01-21 14:05:16 -05:00
Todd Gamblin	10848c2e9a	Refactor args for Executable.__call__ - simplify output, error, and input redirection - `return_output=True` is now `output=str` - `return_output=True` will still work for the time being but is deprecated. - previously you could say `return_output=True` and `output=<stream>`, which wouldn't actually write to the stream. Now you actually can't specify erroneous cases since there is only one parameter with mutually exclusive options..	2016-01-21 10:46:33 -08:00
Todd Gamblin	25f7dbd3e9	Merge pull request #384 from epfl-scitas/packages/elpa added package : elpa	2016-01-21 09:14:28 -08:00
Adam J. Stewart	03d5ee6738	Remove constraint on dependency version	2016-01-21 10:02:33 -06:00
Adam J. Stewart	ea9d0c0263	Remove constraints on dependency versions	2016-01-21 09:58:47 -06:00
Adam J. Stewart	950246b331	Remove constraint on dependency version	2016-01-21 09:54:24 -06:00
alalazo	d9b344a247	Merge branch 'develop' of https://github.com/LLNL/spack into packages/elpa	2016-01-21 12:05:28 +01:00
Todd Gamblin	f0a6bfa23c	Merge pull request #376 from adamjstewart/features/mvapich2 Various updates to MVAPICH2 package	2016-01-21 01:59:35 -08:00
Todd Gamblin	dab65e4ba6	Merge pull request #380 from epfl-scitas/packages/mumps Adding packages MUMPS and ScaLAPACK	2016-01-21 01:58:57 -08:00
alalazo	785c01218f	elpa : added missing dependencies	2016-01-21 10:06:43 +01:00
alalazo	88f2a1d43a	Merge remote-tracking branch 'scitas/packages/mumps' into packages/elpa	2016-01-21 08:34:44 +01:00
alalazo	a8132470e4	Merge branch 'develop' into packages/elpa	2016-01-21 08:33:59 +01:00
Nicolas Richart	b71b478a36	Minor correction to install mumps+mpi	2016-01-20 18:31:02 +01:00
alalazo	19caac69d8	openmpi : turned torque support into a variant (default false) hdf5 : fixed a few bugs, removed suspicious macro deinition, etc.	2016-01-20 15:22:49 +01:00
Nicolas Richart	974fc65e0f	renaming packages to follow changes on develop	2016-01-20 14:38:55 +01:00
Nicolas Richart	65f65ec4e4	Adding MUMPS and ScaLAPACK	2016-01-20 14:21:44 +01:00
alalazo	ab27fdc692	elpa : commit partial package. Blocked by missing scalapack	2016-01-20 09:35:15 +01:00
Peter Scheibel	965af75d23	Merge branch 'develop' into features/boost-additive-libs	2016-01-19 17:27:18 -08:00
Adam J. Stewart	98706d31dc	Various updates to MVAPICH2 package Use url_for_version function to specify urls Add version 2.2b Add dedicated MRAIL variant Fix typo Make fortran compiler flags more specific	2016-01-19 12:46:15 -06:00
Todd Gamblin	9be37da077	Merge pull request #373 from adamjstewart/features/mpich Add verbs variant, remove deprecated configure flags	2016-01-19 08:59:59 -08:00
alalazo	e121faffa1	eigen : added package	2016-01-19 17:26:26 +01:00
Adam J. Stewart	0d42cdaffd	Merge branch 'develop' into features/hdf	2016-01-19 10:09:25 -06:00
Adam J. Stewart	530f8e5b26	Merge branch 'develop' into features/hdf * develop: (85 commits) Make libxcb compile with gcc 4.9. disable parallel install for glib (found races) disable cairo-trace, which is incompatible with older libiberty.h. Fix LaunchMon on newer gcc versions. Simplify output redirection in spack.util.executable Allow completely empty config files. Update cmake package to use http in all URLs. Fix create, diy, edit, and repo commands to use multiple repos. Add namespace option to find command. Temporary fix: Clang is the default compiler on Mac OS X. Netcdf requires cmake >=2.8.12 Mbedtls depends on cmake Update libtool to 2.4.6 Update Julia to 0.4.3 Make binutils build on OS X Add verbs and psm variants py-matplotlib: depend on freetype py-numpy: make blas/lapack optional dependencies qhull: apply patch to work with libc++'s standard library New package GNU tar ...	2016-01-19 10:07:21 -06:00
Adam J. Stewart	fbab88b0e1	Merge branch 'develop' into features/xz * develop: (85 commits) Make libxcb compile with gcc 4.9. disable parallel install for glib (found races) disable cairo-trace, which is incompatible with older libiberty.h. Fix LaunchMon on newer gcc versions. Simplify output redirection in spack.util.executable Allow completely empty config files. Update cmake package to use http in all URLs. Fix create, diy, edit, and repo commands to use multiple repos. Add namespace option to find command. Temporary fix: Clang is the default compiler on Mac OS X. Netcdf requires cmake >=2.8.12 Mbedtls depends on cmake Update libtool to 2.4.6 Update Julia to 0.4.3 Make binutils build on OS X Add verbs and psm variants py-matplotlib: depend on freetype py-numpy: make blas/lapack optional dependencies qhull: apply patch to work with libc++'s standard library New package GNU tar ...	2016-01-19 10:05:50 -06:00
Adam J. Stewart	58f18d5b12	Merge branch 'develop' into features/hwloc * develop: (85 commits) Make libxcb compile with gcc 4.9. disable parallel install for glib (found races) disable cairo-trace, which is incompatible with older libiberty.h. Fix LaunchMon on newer gcc versions. Simplify output redirection in spack.util.executable Allow completely empty config files. Update cmake package to use http in all URLs. Fix create, diy, edit, and repo commands to use multiple repos. Add namespace option to find command. Temporary fix: Clang is the default compiler on Mac OS X. Netcdf requires cmake >=2.8.12 Mbedtls depends on cmake Update libtool to 2.4.6 Update Julia to 0.4.3 Make binutils build on OS X Add verbs and psm variants py-matplotlib: depend on freetype py-numpy: make blas/lapack optional dependencies qhull: apply patch to work with libc++'s standard library New package GNU tar ...	2016-01-19 10:01:42 -06:00
Adam J. Stewart	d20ca32440	Merge branch 'develop' into features/mpc * develop: (85 commits) Make libxcb compile with gcc 4.9. disable parallel install for glib (found races) disable cairo-trace, which is incompatible with older libiberty.h. Fix LaunchMon on newer gcc versions. Simplify output redirection in spack.util.executable Allow completely empty config files. Update cmake package to use http in all URLs. Fix create, diy, edit, and repo commands to use multiple repos. Add namespace option to find command. Temporary fix: Clang is the default compiler on Mac OS X. Netcdf requires cmake >=2.8.12 Mbedtls depends on cmake Update libtool to 2.4.6 Update Julia to 0.4.3 Make binutils build on OS X Add verbs and psm variants py-matplotlib: depend on freetype py-numpy: make blas/lapack optional dependencies qhull: apply patch to work with libc++'s standard library New package GNU tar ...	2016-01-19 09:58:07 -06:00
Adam J. Stewart	f48fc0d8b1	Revert deprecated configure flags	2016-01-19 09:43:28 -06:00
Adam J. Stewart	16f1267c29	Merge branch 'develop' into features/mpich * develop: (43 commits) Make libxcb compile with gcc 4.9. disable parallel install for glib (found races) disable cairo-trace, which is incompatible with older libiberty.h. Fix LaunchMon on newer gcc versions. Simplify output redirection in spack.util.executable Allow completely empty config files. Fix create, diy, edit, and repo commands to use multiple repos. Add namespace option to find command. Temporary fix: Clang is the default compiler on Mac OS X. update compiler config test. add sanity check on config write as well as validation on read. Add jsonschema validation for config files. Make text wrapping off by default in tty, add a kwarg for it. add/remove/list working for new config format. Add Python 3 aliases to our argparse backport. All tests that call concretize() need to be MockPackagesTests. Fix bug in tests. Rework mirror configuration. Rework compiler configuration and simplify config.py logic. Remove mock_configs; tests no longer modify spack home directory. ...	2016-01-19 09:37:53 -06:00
Todd Gamblin	01c5b53ba1	Make libxcb compile with gcc 4.9.	2016-01-19 01:16:15 -08:00
Todd Gamblin	047f1b9de9	disable parallel install for glib (found races)	2016-01-19 01:16:15 -08:00
Todd Gamblin	b7b4faff96	disable cairo-trace, which is incompatible with older libiberty.h.	2016-01-19 01:16:14 -08:00
Todd Gamblin	67ea7ce0ab	Fix LaunchMon on newer gcc versions.	2016-01-19 01:16:14 -08:00
Todd Gamblin	8d6342c53d	Merge branch 'mplegendre-multi_pkgsrc_roots' into develop - This moves var/spack/packages to var/spack/repos/builtin/packages. - Packages that did not exist in the source branch, or were changed in develop, were moved into var/spack/repos/builtin/packages as part of the integration. Conflicts: lib/spack/spack/test/unit_install.py var/spack/repos/builtin/packages/clang/package.py	2016-01-19 01:16:08 -08:00
Adam J. Stewart	58162ec170	Add verbs variant, remove deprecated configure flags	2016-01-18 16:03:41 -06:00
Todd Gamblin	d802165e03	Merge pull request #355 from eschnett/eschnett/llvm LLVM depends on cmake, and does not depend on isl	2016-01-17 19:24:17 -08:00
Todd Gamblin	4bab6f9fdb	Update cmake package to use http in all URLs.	2016-01-17 18:55:36 -08:00
Todd Gamblin	afcd5420ee	Merge pull request #356 from eschnett/eschnett/tar New package GNU tar	2016-01-17 18:49:14 -08:00
Todd Gamblin	85e8f8eb6a	Merge pull request #353 from eschnett/eschnett/ncurses Install ncurses properly	2016-01-17 18:49:00 -08:00
Todd Gamblin	635e053e6d	Merge pull request #358 from adamjstewart/features/openmpi Add psm and verbs variants	2016-01-17 18:45:13 -08:00
Todd Gamblin	77c6038711	Merge pull request #370 from eschnett/eschnett/netcdf-cmake Netcdf requires cmake >=2.8.12	2016-01-17 18:31:56 -08:00
Todd Gamblin	a473830533	Merge pull request #367 from eschnett/eschnett/mbedtls-cmake Mbedtls depends on cmake	2016-01-17 18:26:07 -08:00
Todd Gamblin	99390be127	Merge pull request #366 from eschnett/eschnett/libtool-2.4.6 Update libtool to 2.4.6	2016-01-17 18:25:55 -08:00
Todd Gamblin	c20f8eb5b3	Merge pull request #365 from eschnett/eschnett/julia-0.4.3 Update Julia to 0.4.3	2016-01-17 18:25:45 -08:00
Todd Gamblin	1a145f68a7	Merge pull request #362 from eschnett/eschnett/binutils-osx Make binutils build on OS X	2016-01-17 18:25:24 -08:00
Erik Schnetter	81f1311a60	Netcdf requires cmake >=2.8.12	2016-01-17 14:57:08 -08:00
Erik Schnetter	f4b87e2967	Mbedtls depends on cmake	2016-01-17 11:05:15 -05:00
Erik Schnetter	60656b6255	Update libtool to 2.4.6	2016-01-17 11:03:40 -05:00
Erik Schnetter	e585a5d8a3	Update Julia to 0.4.3	2016-01-17 11:02:30 -05:00
Erik Schnetter	981cefe8d3	Make Boost build with MPI on OS X Boost does not build on OS X with either gold or binutils. The gold linker does not exist on Darwin, and binutils on Darwin provides an assembler that doesn't work for Boost. - Introduce a variant that specifies whether to build with binutils, defaulting to true for backward compatibility - Auto-detect whether we build on Darwin; in this case, set the gold and binutils variant defaults to false - Clean up configure flags for as and ld	2016-01-17 10:54:12 -05:00
Erik Schnetter	36a428b8fc	Make binutils build on OS X Binutils defines several global variables multiple times. Apparently this works fine under Linux, but it leads to a linker error on Darwin. Rename these global variables. Note that binutils on OS X is still not really useful, as important tools (e.g. ld) are not supported.	2016-01-17 10:49:13 -05:00
Peter Scheibel	d22cf1aed1	1. raise an exception if the multithreaded and singlethreaded options are both disabled 2. invoke the b2 installation once for each enabled threading option (apparently the install fails if a single call has both options enabled for mpi)	2016-01-15 18:07:41 -08:00
Adam J. Stewart	eac795abc3	Add verbs and psm variants	2016-01-15 15:09:36 -06:00
Ben Boeckel	4f60948bff	py-matplotlib: depend on freetype Probably a missed dependency, but appeared on OS X.	2016-01-15 16:04:49 -05:00
Ben Boeckel	c3bf1a7741	py-numpy: make blas/lapack optional dependencies OS X is having trouble building these libraries, so make them optional dependencies.	2016-01-15 16:03:51 -05:00
Ben Boeckel	f6680a0051	qhull: apply patch to work with libc++'s standard library Only seen on OS X with clang right now.	2016-01-15 16:02:35 -05:00
Nicola Varini	7fc308ed26	Update to version 5.3	2016-01-15 17:04:25 +01:00
Nicola Varini	7d0256c9fb	Quantum-ESPRESSO package	2016-01-15 10:27:38 +01:00
Erik Schnetter	0a993cd9d7	New package GNU tar	2016-01-14 20:44:51 -05:00
Erik Schnetter	3e703cc281	LLVM depends on cmake, and does not depend on isl Add cmake requirement. Remove gmp and isl requirements. Using an external isl leads to a build failure for me on a fairly standard Fedora Linux workstation. The Spack package file says that isl is required for polly, however, the polly documentation states that as of LLVM 3.7, polly includes isl, and has no external dependencies any more.	2016-01-14 17:52:28 -05:00
Erik Schnetter	aa3897a880	Install ncurses properly Currently, ncurses's include files are installed into two separate subdirectories, "install/ncurses" and "install/ncursesw". The second level of subdirectories ("ncurses" and "ncursesw") are non-standard. I checked several systems to confirm this, and ncurses examples on the web also simply contain "#include <ncurses.h>" instead of "#include <ncurses/ncurses.h>", which would be necessary to use the currently installed ncurses packages. For example, this also breaks llvm, which uses ncurses, but does not expect the second level of subdirectories. I am now using the option "--enable-overwrite", which installs the header files directly in to ".../include". I also enable "widec" support all the time. These options are e.g. similar to the ones used by MacPorts, and I confirm that they make the llvm package build (which didn't build before).	2016-01-14 17:40:11 -05:00
Todd Gamblin	1268b41570	Merge pull request #293 from trws/llvm-rework Llvm rework	2016-01-14 01:13:39 -08:00
Todd Gamblin	93fdb06d7d	Merge pull request #273 from epfl-scitas/packages/R R : updated package	2016-01-14 00:13:27 -08:00
Adam J. Stewart	244ee673d6	Add latest version	2016-01-13 11:44:51 -06:00
Todd Gamblin	a56575a6d2	Merge pull request #324 from eschnett/eschnett/openblas-lapack Ensure that OpenBLAS provides a file liblapack.a	2016-01-13 08:26:26 -08:00
Erik Schnetter	aa1f96c73b	New package "cereal"	2016-01-13 11:21:52 -05:00
alalazo	78b57787fa	gmsh : added hdf5 support	2016-01-13 12:22:59 +01:00
alalazo	767f286a9f	gmsh : added fltk support	2016-01-13 11:26:10 +01:00
alalazo	ffaa4a8922	gmsh : added package with basic compile options	2016-01-13 10:05:19 +01:00
Todd Gamblin	8ead7783ab	Merge pull request #345 from eschnett/eschnett/petsc-python-2 Correct Python version constraint syntax	2016-01-12 14:26:28 -08:00
Erik Schnetter	8eb16ba02d	Merge branch 'develop' into eschnett/petsc-python-2 # Conflicts: # var/spack/packages/petsc/package.py	2016-01-12 14:36:37 -05:00
Adam J. Stewart	a6f2cc9cbf	Add required dependency version	2016-01-12 13:28:48 -06:00
Adam J. Stewart	180c673c78	Add different URL for older source code	2016-01-12 13:21:53 -06:00
Adam J. Stewart	6985d2c914	Add url_for_version function to calculate url	2016-01-12 13:00:05 -06:00
Adam J. Stewart	5520ce3c4a	Removed unnecessary URLs	2016-01-12 12:19:03 -06:00
Adam J. Stewart	9b3e0255f4	Add HDF package	2016-01-12 11:55:42 -06:00
Todd Gamblin	4ac530d289	Merge pull request #314 from eschnett/eschnett/libpciaccess-configure Build libpciaccess from tarball	2016-01-12 09:14:19 -08:00
Todd Gamblin	5bdc6e53e5	Merge pull request #323 from eschnett/eschnett/openssl-apps Ensure the APPS environment variable is not set when building OpenSSL	2016-01-12 09:13:50 -08:00
Todd Gamblin	dd0aa90aa1	Merge pull request #328 from eschnett/eschnett/lua-readline Resolve readline/ncurses dependency when building Lua	2016-01-12 09:13:21 -08:00
Todd Gamblin	1a3c0063a5	Merge pull request #329 from epfl-scitas/packages/cmake cmake : added variant that activates the build of the ncurses gui	2016-01-12 09:12:06 -08:00
alalazo	1f78b9c7af	parmetis : removed leftover import statement	2016-01-12 16:59:47 +01:00
alalazo	da8b08b5fe	parmetis : used spack install method instead of shutil.copy	2016-01-12 14:55:29 +01:00
alalazo	30da85c3d8	metis : added variant specified in BUILD.txt. Fixed wrong dependency on MPI. parmetis : added variants as in metis	2016-01-12 14:25:06 +01:00
Peter Scheibel	50727527bc	This commit makes the following changes: There are two sensible defaults for building boost libraries: build all of them or build none of them. Previously the Spack boost package took the first approach. This commit changes to building no libraries by default. The user can specify which libraries they need using variants (e.g. +iostreams to compile the boost iostreams library). If no libraries are built then a header-only install is performed (no compilation, just copy header files to prefix). The consequence of this change is that packages which specify a dependency on boost may now fail (until they are updated to specify exactly which boost libraries they need compiled). The user may now specify whether to build shared libraries (static libraries are always built) and whether to build libraries with/out multi-threading support (default is to only build with multi-threading support). The executable on the user-config.jam toolset line is set to Spack's cc script. Before, without this, the desired toolset was used but Spack deferred to the boost build system to choose the compiler version. bzip2 and zlib are always specified as dependencies when iostreams is built (before this could be controlled with the +compression variant).	2016-01-11 15:51:59 -08:00
Erik Schnetter	36d74d2a97	Correct Python version constraint syntax	2016-01-11 17:39:39 -05:00
Erik Schnetter	a5588e4bb7	Download package version with a configure script This avoids having to use autoconf, which requires many m4 scripts that are not always available.	2016-01-11 17:37:13 -05:00
Erik Schnetter	8af8c10559	Avoid key error when env var is unset	2016-01-11 17:33:44 -05:00
Todd Gamblin	85220dd77d	Revert "Require Python for PETSc"	2016-01-11 13:57:21 -08:00
Todd Gamblin	01f2c38ee7	Merge pull request #320 from eschnett/eschnett/parmetis-cmake parmetis requires cmake @2.8:	2016-01-11 13:56:28 -08:00
Todd Gamblin	25e398645f	Merge pull request #321 from eschnett/eschnett/petsc-python Require Python for PETSc	2016-01-11 13:56:10 -08:00
Todd Gamblin	c4f2373ac2	Merge pull request #318 from eschnett/eschnett/metis-cmake Require cmake @2.8: for metis	2016-01-11 13:56:04 -08:00
Todd Gamblin	d2b925c709	Merge pull request #312 from eschnett/eschnett/petsc-mpi Make PETSc build with OpenMPI	2016-01-11 13:53:51 -08:00
Todd Gamblin	87e8430921	Merge pull request #316 from eschnett/eschnett/tgz Use .tar.gz instead of .tar.xz in several packages for backward compatibility	2016-01-11 13:52:50 -08:00
Todd Gamblin	d380820f3a	Merge pull request #322 from eschnett/eschnett/gperftools-update Update gperftools	2016-01-11 13:52:05 -08:00
Todd Gamblin	309425833b	Merge pull request #325 from eschnett/eschnett/julia-update Several small updates to Julia	2016-01-11 13:48:09 -08:00
Todd Gamblin	9bbb9a8f0a	Merge pull request #330 from epfl-scitas/packages/cgal Added package : cgal	2016-01-11 13:47:55 -08:00
Todd Gamblin	054c6eefdb	Merge pull request #334 from adamjstewart/features/patchelf Add PatchELF package	2016-01-11 13:47:31 -08:00
Adam J. Stewart	adbe1d4f06	Add PatchELF package	2016-01-11 13:54:26 -06:00
Adam J. Stewart	6a51b1d570	Add SZip package	2016-01-11 13:43:31 -06:00
alalazo	81a389151f	cmake : added variant that activates the build of the ncurses gui	2016-01-11 13:00:23 +01:00
alalazo	625570e730	added package : cgal	2016-01-11 12:50:47 +01:00
Erik Schnetter	23c5a1e6e9	Build Lua on Darwin	2016-01-10 19:37:44 -05:00
Erik Schnetter	9f2dbc9df4	Update Lua to 5.3.2	2016-01-10 19:34:02 -05:00
Erik Schnetter	992b9c46dd	Resolve readline/ncurses dependency when building Lua	2016-01-10 13:44:53 -08:00
Erik Schnetter	79a1de2f17	Add a patch to prevent Julia running out of virtual memory	2016-01-09 10:47:31 -05:00
Erik Schnetter	b18732173a	Require Python to build Julia	2016-01-08 23:21:54 -05:00
Erik Schnetter	d9f1a55c90	Ensure than OpenBLAS provides a file liblapack.a OpenBLAS implements the virtual package "lapack", and its consumers apparently expect a "liblapack.a".	2016-01-08 22:48:37 -05:00
Erik Schnetter	d5ff7fda6e	Ensure the APPS environment variable is not set when building OpenSSL	2016-01-08 22:41:18 -05:00
Erik Schnetter	3d7e7c53c5	Require libunwind	2016-01-08 22:33:55 -05:00
Erik Schnetter	0c9acb0f62	Update gperftools to version 2.4	2016-01-08 22:32:00 -05:00
Erik Schnetter	2ac2985cf2	Require Python for PETSc PETSc requires Python for building. I have a case where an HPC system has a very old default Python version, too old for Spack. So I load a module for Python, which makes Spack work. This module relies on LD_LIBRARY_PATH. When building PETSc, Spack unsets LD_LIBRARY_PATH, breaking the Python that PETSc finds. Explicitly requiring Python for PETSc makes building PETSc work.	2016-01-08 22:24:42 -05:00
Erik Schnetter	e628896c2b	parmetis requires cmake @2.8:	2016-01-08 22:12:19 -05:00
Erik Schnetter	da8fd5b30a	Require cmake @2.8: for metis	2016-01-08 21:56:08 -05:00
Erik Schnetter	04f908a957	Require cmake @2.8:	2016-01-08 21:41:35 -05:00
Erik Schnetter	8da1dd2b45	Require cmake	2016-01-08 21:32:17 -05:00
Erik Schnetter	6214148d35	Use .tar.gz instead of .tar.xz for backward compatibility	2016-01-08 17:16:30 -05:00
Gregory L. Lee	7ad3e2b56b	new python packages	2016-01-08 11:09:11 -08:00
Gregory L. Lee	175f20a9dc	new and updated python packages	2016-01-07 11:12:47 -08:00
Erik Schnetter	1646bec1a4	Make PETSc build with OpenMPI	2016-01-07 13:54:47 -05:00
Todd Gamblin	dd04b6a873	Merge pull request #278 from eschnett/eschnett/hdf5-variants Enable several variants for HDF5	2016-01-06 23:50:40 -08:00
Todd Gamblin	a651572cfd	Merge pull request #307 from eschnett/eschnett/atop New package atop	2016-01-06 23:40:03 -08:00
Ben Boeckel	e790146627	paraview: add some extra arguments on OS X X shouldn't be used on OS X and spack expects a Unix-style install, not a .app bundle.	2016-01-06 12:05:05 -05:00
Erik Schnetter	fd7c1fe584	Avoid using tabs	2016-01-06 10:10:15 -05:00
Todd Gamblin	84c7e457e9	Merge pull request #302 from eschnett/eschnett/correct-boost Correct `join_path` in package boost	2016-01-06 04:34:44 -08:00
Todd Gamblin	a65fa54514	Merge pull request #270 from eschnett/eschnett/openssl-darwin Make OpenSSL build on Darwin	2016-01-06 04:07:16 -08:00
alalazo	7670dc7efc	glpk : added support for gmp	2016-01-06 10:05:48 +01:00
alalazo	24ba60168d	added package : glpk	2016-01-06 09:49:10 +01:00
Erik Schnetter	cfe54b201d	New package atop	2016-01-05 20:09:22 -05:00
Erik Schnetter	60d8413940	Support mbedtls, an alternative SSL library	2016-01-05 19:21:57 -05:00
Mike Nolta	2b801e2086	new package: py-astropy	2016-01-05 15:41:18 -05:00
Erik Schnetter	c18dfa058a	Add details to comment	2016-01-05 14:09:54 -05:00
Erik Schnetter	12632f16b8	Combine with other OpenSSL Darwin patch Set KERNEL_BITS. Don't use Darwin-specific configure script.	2016-01-05 13:17:17 -05:00
Erik Schnetter	25934200de	Merge branch 'develop' into eschnett/openssl-darwin	2016-01-05 13:09:57 -05:00
Erik Schnetter	24ced90913	Correct `join_path` in package boost	2016-01-05 09:40:30 -05:00
Todd Gamblin	20e8b67eb6	Merge pull request #297 from eschnett/eschnett/boost-darwin Support Darwin for Boost	2016-01-05 00:42:31 -08:00
Erik Schnetter	96e5905bce	Build multiple FFTW variants simultaneously FFTW can build only one floating point precision (float, double, long double, quad) at once, but they can all be installed simultaneously as the libraries have different names. It is common packages to decide only at run time which precision FFTW they need, and thus FFTW should offer all precisions at once.	2016-01-04 12:14:42 -05:00
Tom Scogland	133fda11f2	Merge remote branch 'origin/llvm-rework' into llvm-rework	2016-01-03 17:22:57 -08:00
Tom Scogland	884f317d50	tweak gold support, added to gcc The gold linker support and gold plugin variants now use the same name. Trying to apply use-flag-style discipline here despite the fact gold has other implications for clang, this way globally enabling gold will have a more consistent effect if that becomes possible. The gold support in gcc could use more testing to ensure it works consistently, but as long as a binutils including gold is used the gcc configure tends to pick it up, and it seems to work with 5.3.0 at least.	2016-01-03 17:22:13 -08:00
Tom Scogland	31803d10aa	bringing back configuration and build stages	2016-01-02 11:59:33 -08:00
Tom Scogland	356836ccbb	removed extraneous comment lines	2016-01-01 22:30:02 -08:00
Erik Schnetter	03537a6be4	Support Darwin for Boost Ensure that builds on Darwin use the "darwin" toolset. Also update Boost to 1.60.0.	2016-01-01 17:38:42 -05:00
Erik Schnetter	f5a49280c3	Enable C++ and Fortran languages by default	2016-01-01 17:26:49 -05:00
Todd Gamblin	3c64c18bfc	Merge pull request #274 from eschnett/eschnett/julia Add package for Julia	2015-12-31 15:46:52 -08:00
Todd Gamblin	48ebb25c25	Merge pull request #271 from eschnett/eschnett/pcre2 New package PCRE2	2015-12-31 15:40:03 -08:00
Todd Gamblin	7062b216b8	Merge pull request #258 from epfl-scitas/packages/scalasca Packages/scalasca	2015-12-31 15:27:39 -08:00
Tom Scogland	48f19b5fde	add the gold linker to binutils	2015-12-30 16:59:39 -08:00
Tom Scogland	5d89fb8dfa	ensure that clang-query gets installed	2015-12-30 16:59:39 -08:00
Tom Scogland	4ae98f8b21	significant llvm update This update significantly reworks the llvm and clang packages. The llvm package now includes variants allowing it to build and install any and all of: * clang * lldb * llvm's libunwind (why, WHY did they name it this?!?) * polly (including building it directly into the clang tools, 3.7.0 only) * clang extra tools * compiler-rt (sanitizers) * clang lto (the gold linker plugin that allows same to work) * libcxx/libcxxabi * libopenmp, also setting the default openmp runtime to same, when parameters happen this shoudl be an option of libomp or libgomp Ideally, this should have rpath setup like the gcc package does, but clang's driver has no support for specs as such, and no clearly equivalent mechanism either. If anyone has ideas on this, they would be welcome. One significant note related to gcc though, if you test this on LLNL systems, or anywhere that has multiple GCCs straddling the dwarf2 boundary and sharing a libstdc++, build a gcc with spack and use that to build clang. If you use a gcc4.8+ to build this with an older libstdc++ it will fail on missing unwind symbols because of the discrepancy. Resource handling has been changed slightly to move the unpacked archive into the target rather than use symlinks, because symlinks break certain kinds of relative paths, and orders resource staging such that nested resources are unpacked after outer ones.	2015-12-30 16:59:39 -08:00
Tom Scogland	01f811d546	legacy mysql bindings for python	2015-12-30 11:18:13 -08:00
Tom Scogland	31f674da3c	python libraries, libedit, and ninja A pile of libraries and tools, libedit is actually important as a replacement of readline for non-GPL projects. Also ninja may be worthwhile for some of the larger CMake projects, like llvm/clang.	2015-12-30 11:13:09 -08:00
Todd Gamblin	3e3667f254	Revert "removing check as it can cause failures in zsh" This reverts commit `496e485691`. Undo overly large set of changes -- LLVM wasn't ready. Tom can recommit just the zsh stuff.	2015-12-30 10:20:27 -08:00
Tom Scogland	496e485691	removing check as it can cause failures in zsh	2015-12-30 10:13:46 -08:00
Todd Gamblin	ff0d871612	Remove mock_configs; tests no longer modify spack home directory.	2015-12-27 21:13:18 -08:00
Todd Gamblin	c65fd3a289	Merge branch 'develop' into mplegendre-multi_pkgsrc_roots Conflicts: lib/spack/spack/cmd/create.py lib/spack/spack/cmd/extensions.py lib/spack/spack/cmd/fetch.py lib/spack/spack/cmd/uninstall.py lib/spack/spack/config.py lib/spack/spack/database.py lib/spack/spack/directory_layout.py lib/spack/spack/packages.py lib/spack/spack/spec.py	2015-12-25 16:35:55 -08:00
Erik Schnetter	be12720eb7	Use `filter_file` instead of calling perl	2015-12-25 14:02:56 -05:00
Erik Schnetter	01f7e768f6	Enable several variants for HDF5 +cxx, +fortran: Enable support for the respective languages +threadsafe: Enable multi-threading	2015-12-23 22:49:42 -05:00
Erik Schnetter	51f546fe92	Add comments to package file	2015-12-23 18:21:41 -05:00
Erik Schnetter	309877088d	Build Julia	2015-12-23 18:21:40 -05:00
Erik Schnetter	a58dd8f6ab	Remove leftover debug statement	2015-12-23 18:19:26 -05:00
alalazo	21dae4577a	R : updated package	2015-12-23 10:20:13 +01:00
Erik Schnetter	60ec79eac3	New package PCRE2 This is a major update of the package PCRE. It seems both PCRE and PCRE2 can be installed at the same time; their APIs are different.	2015-12-22 18:53:43 -05:00
Erik Schnetter	a540a68561	Make OpenSSL build on Darwin	2015-12-22 18:51:49 -05:00
Todd Gamblin	d1d23ec5e6	Merge pull request #257 from eschnett/eschnett/hwloc-1.11.2 Update hwloc; don't require libpciaccess on OS X	2015-12-22 15:18:39 -08:00
Erik Schnetter	552d8ca5f0	Update rsync to 3.1.2	2015-12-22 16:40:09 -05:00
Erik Schnetter	6831ee6f0a	Skip installing libpciaccess on Darwin	2015-12-22 16:24:05 -05:00
Erik Schnetter	6dc1fc03c1	Update hwloc; don't require libpciaccess on OS X - hwloc 1.11.2 is available. - libpciaccess is not supported on OS X; don't require it there.	2015-12-22 15:50:46 -05:00
Todd Gamblin	100ada0ed6	Merge pull request #266 from LLNL/bugfix/python3-setuptools-conflict fix conflict with setuptools and cached pyc files	2015-12-22 09:19:57 -08:00
Gregory L. Lee	41fd380d1b	fixed site pyc regular expression	2015-12-22 09:15:47 -08:00
Todd Gamblin	b1d40efd99	Merge pull request #261 from LLNL/features/prefer-versions-in-packages Add ability to prefer particular versions in packages.	2015-12-22 08:25:52 -08:00
Gregory L. Lee	3db1c1761e	only ignore cached site.py file	2015-12-22 08:03:17 -08:00
Todd Gamblin	5bcec9289e	Merge pull request #263 from nolta/hdf5-mpi fix non-mpi hdf5 package build	2015-12-22 07:57:11 -08:00
Gregory L. Lee	d85a46380c	fix conflict with setuptools and cached pyc files	2015-12-22 06:50:18 -08:00
alalazo	fc43f3c730	valgrind : added package	2015-12-22 10:11:18 +01:00
Mike Nolta	bfc72c04fb	fix non-mpi hdf5 package build Fixes a couple of issues in `c5b7eba457`.	2015-12-21 18:59:01 -05:00
Todd Gamblin	fe0fdf60b4	Add ability to prefer particular versions in packages. - Adding `preferred=True` to a version directive will change its sort order in concretization. - This provides us a rudimentary ability to keep the Spack stack stable as new versions are added. - Having multiple stacks will come next, but this at least allows us to specify default versions of things instead of always taking the newest.	2015-12-21 15:35:47 -08:00
Gregory L. Lee	c3aaf005e2	new python versions	2015-12-21 15:14:59 -08:00
Gregory L. Lee	f9326053b9	remove numpy compiler patch	2015-12-21 13:56:19 -08:00
Todd Gamblin	73ea15db8e	Merge pull request #208 from epfl-scitas/features/resource_directive resource directive : implementation + clang / llvm use case	2015-12-21 10:34:16 -08:00
Todd Gamblin	d5e9279c1d	Merge pull request #215 from sjtbham/develop fix build to work against depends for modules created by setup.py and…	2015-12-21 09:24:16 -08:00
alalazo	a411c497ab	scalasca + dependencies : simplified build after #255	2015-12-21 16:10:55 +01:00
alalazo	0a191d6b09	scalasca : updated package build (depends on scorep, does not build twice).	2015-12-21 15:02:48 +01:00
Todd Gamblin	bb329d8a5c	Merge pull request #231 from epfl-scitas/packages/scotch scotch: adding dependencies + variants for mpi, shared, compression and esmumps	2015-12-20 14:29:19 -08:00
Todd Gamblin	d6edaa0970	Merge pull request #251 from epfl-scitas/packages/tau Improved build of tau and related dependencies	2015-12-20 14:26:40 -08:00
alalazo	14c9c61275	tau : scorep is now a variant	2015-12-20 17:38:35 +01:00
Nicolas Richart	27d52badb1	removing completely the write_make_inc function	2015-12-20 13:38:22 +01:00
Nicolas Richart	614c4d1876	moving write_make_inc into a patch function	2015-12-20 13:27:43 +01:00
Todd Gamblin	37db5928b7	Merge pull request #109 from justintoo/add-package-spot (Package) Add Spot C++ library (v1.99.3)	2015-12-19 21:06:22 -08:00
Todd Gamblin	22a4eb6b27	Merge pull request #226 from epfl-scitas/packages/mpiches mpich, mvapich2: changes the filter for the wrappers mpi{cc, cxx, f77, fc}	2015-12-19 21:04:08 -08:00
Todd Gamblin	1b086c928c	Merge pull request #227 from trws/fetch-deps fetch: add options to fetch missing or all deps	2015-12-19 21:02:42 -08:00
Todd Gamblin	3d3bea618e	Fix empty format strings in some packages.	2015-12-19 20:08:14 -08:00
Mike Nolta	e403576cf9	new package: cfitsio	2015-12-19 18:38:23 -05:00
Gregory L. Lee	8dd1f3ffa5	added mrnet 5.0.1	2015-12-19 07:43:34 -08:00
alalazo	f3837dd686	tau : removed direct otf2 support	2015-12-18 16:15:30 +01:00
alalazo	dfbf1b2205	Merge branch 'develop' of https://github.com/alalazo/spack into packages/tau	2015-12-18 13:00:43 +01:00
alalazo	8dc32aeedb	Improved tau build and added optional dependencies	2015-12-18 12:58:29 +01:00
Todd Gamblin	3198522a7f	Merge pull request #236 from nolta/cmake-enable-ssl cmake: enable ssl, for https downloads	2015-12-17 23:03:31 -08:00
David Beckingsale	f91e1ae83f	Added Lmod package	2015-12-17 15:26:47 -08:00
Todd Gamblin	4d982f5aca	Merge pull request #86 from jgalarowicz/develop Add support for Krell Institute related products.	2015-12-17 12:35:30 -08:00
Jim Galarowicz	c02cbaecd8	Change back the previous boost change and change the mrnet variant name to lwthreads.	2015-12-17 07:41:49 -08:00
Todd Gamblin	85c02dbe7b	Merge pull request #167 from mathstuf/hdf5-fix-mpi-dependency Hdf5 fix mpi dependency	2015-12-16 12:03:22 -08:00
Todd Gamblin	9ac4c730fb	Merge pull request #241 from epfl-scitas/packages/gnuplot gnuplot : added package	2015-12-16 11:37:26 -08:00
alalazo	cc9266e56c	gsl : added package	2015-12-16 12:45:58 +01:00
Massimiliano Culpo	d5018e77a3	gnuplot : modifications to build on RHLE 6	2015-12-16 09:32:48 +01:00
Mike Nolta	917fb328bb	cmake: enable ssl, for https downloads By default cmake builds its own curl, without SSL support. This patch enables SSL when building cmake, fixing the following error: error: downloading 'https://...' failed status_code: 1 status_string: "Unsupported protocol" log: Protocol "https" not supported or disabled in libcurl	2015-12-15 12:39:30 -05:00
alalazo	0a0cd4b9d3	gnuplot : added package	2015-12-15 16:29:36 +01:00
Nicolas Richart	ed7db8e489	adding external dependencies + variants for mpi, shared and compression	2015-12-14 21:59:40 +01:00
alalazo	1bfb16592b	fftw : added package	2015-12-14 16:31:02 +01:00
Jim Galarowicz	8df4fd9e94	Fix build of krell tools to use spack with minimal impact on rest of spack packages.	2015-12-13 17:13:34 -08:00
Jim Galarowicz	0fc83ba999	Fix merge conflict with papi package.	2015-12-11 17:23:54 -08:00
Ben Boeckel	6f978af77b	hdf5: update dependents to declare MPI support	2015-12-10 11:53:40 -05:00
Ben Boeckel	79a641ccf1	paraview: update hdf5 comment	2015-12-10 11:51:54 -05:00
Ben Boeckel	c5b7eba457	hdf5: make mpi support optional	2015-12-10 11:51:54 -05:00
Tom Scogland	786f4cd2c2	add dependency fetching to mirror creation	2015-12-10 08:32:51 -08:00
Gregory L. Lee	3163d016db	install python files to libxml2 prefix instead of python prefix and ignore non-python files when activating	2015-12-09 14:10:05 -08:00
Nicolas Richart	0daa08416a	corrected filter_compilers + added it for mvapich2	2015-12-09 20:00:54 +01:00
Todd Gamblin	f6eb000381	Merge pull request #225 from epfl-scitas/packages/git Adding https support in git even if system lib are missing	2015-12-09 10:59:47 -08:00
alalazo	20e67bc5e6	clang : solve the issue with missing default include paths for OpenMP and libc++ resource : support for finer grained linking of resources	2015-12-09 17:15:26 +01:00
Nicolas Richart	31863c68d8	Adding curl and expat support to git for https repos	2015-12-09 11:00:33 +01:00
Todd Gamblin	e46af913be	Merge pull request #148 from PaulDapolito/glib-dep added zlib dependency to glib package specification	2015-12-09 01:44:00 -08:00
Todd Gamblin	8ebac18f50	Merge pull request #224 from epfl-scitas/packages/gdb gdb : added package	2015-12-09 01:35:04 -08:00
Todd Gamblin	c41b9b7ddc	Change github.com/scalability-llnl to github.com/llnl everywhere.	2015-12-09 01:24:15 -08:00
alalazo	4d5eb4ce7d	gdb : added package	2015-12-09 09:06:10 +01:00
alalazo	c5b9732aed	Should fix #177 gcc : changed objdir to something out of srcdir and added '--with-sysroot=/' binutils : added '--with-sysroot=/'	2015-12-08 14:06:04 +01:00
Todd Gamblin	e7ab8d476d	Merge pull request #219 from eschnett/eschnett/gmp Update gmp to 6.1.0	2015-12-07 16:46:44 -08:00
Todd Gamblin	6bc86a6baa	Merge pull request #220 from eschnett/eschnett/mpc Update mpc to 1.0.3	2015-12-07 16:46:32 -08:00
Todd Gamblin	b0434fa486	Merge pull request #221 from davidbeckingsale/features/cleverleaf-boost Update CleverLeaf package to use Boost and fix SAMRAI MPI usage	2015-12-07 16:46:15 -08:00
Matthew LeGendre	f8e046bb33	Fix issue with gcc 5.x not building on RHEL6	2015-12-07 15:49:47 -08:00
Gregory L. Lee	1a22a507d6	mesa requires +python variant of libxml2	2015-12-07 15:36:36 -08:00
David Beckingsale	36272c8136	Fix MPI selection in SAMRAI and remove narrow dependency specification	2015-12-07 14:58:16 -08:00
David Beckingsale	77bf133cd2	Update CleverLeaf package to use Boost and fix SAMRAI MPI usage	2015-12-07 14:33:31 -08:00
Erik Schnetter	aff95ee587	Update mpc to 1.0.3	2015-12-05 11:23:40 -05:00
Erik Schnetter	29537b9991	Update gmp to 6.1.0	2015-12-05 11:21:47 -05:00
Gregory L. Lee	5891847ae4	added py-pillow and updated py-basemap to depend on it	2015-12-03 15:35:28 -08:00
Gregory L. Lee	a56c7e5f1a	Merge branch 'develop' of https://github.com/scalability-llnl/spack into develop	2015-12-03 15:02:49 -08:00
Gregory L. Lee	0f4efc018d	updated package versions	2015-12-03 15:01:44 -08:00
Nicolas Richart	1a132e4fdb	Missing declaration of the debug variant	2015-12-02 16:18:29 +01:00
Simon Thompson	aa137d8be0	fix build to work against depends for modules created by setup.py and add python3 support	2015-12-02 14:20:11 +00:00
Nicolas Richart	4bb6f23ae1	Adding variant for mpi and python + compression for iostream	2015-12-02 13:26:00 +01:00
Massimiliano Culpo	39a3cfd4d9	reource directive accepts 'basename' keyword llvm : libc++ variant	2015-12-02 12:24:37 +01:00
Massimiliano Culpo	a173ab1e31	clang : default OpenMP is libomp	2015-12-01 12:16:08 +01:00
Kevin Huck	cd1207329b	Updating the OMPT hash again...	2015-11-30 10:32:07 -08:00
Kevin Huck	d5c7cd5e50	Had to force a patch to the OMPT support, so the hash for v0.1 has changed.	2015-11-30 09:48:15 -08:00
Tom Scogland	b253308eee	returning flux to a building state for web release Flux package reworked to include all new dependencies, fixed issues with a clean-build of hwloc, lua and czmq as well that prevented flux from building cold on a minimal system.	2015-11-29 19:22:31 -08:00
Todd Gamblin	7383bd393e	Fixed bug #42 : problem with satisfies() for virtual dependencies. - _cross_provider_maps() had suffered some bit rot (map returned was ill-formed but still worked for cases with one vdep) - ProviderIndex.satisfies() was only checking whether the result map was non-empty. It should check whether all common vdeps are in the result map, as that indicates there is some way to satisfy all of them. We were checking whether there was some way to satisfy any one of them, which is wrong. - Above would cause a problem when there is more than one vdep provider. - Added test that covers this case. - Added `constrained()` method to Spec. Analogous to `normalized()`: `constrain():constrained() :: normalize():normalized()`	2015-11-27 23:06:18 -08:00
Todd Gamblin	89d5127900	New, cleaner package repository structure. Package repositories now look like this: top-level-dir/ repo.yaml packages/ libelf/ package.py mpich/ package.py ... This leaves room at the top level for additional metadata, source, per-repo configs, indexes, etc., and it makes it easy to see that something is a spack repo (just look for repo.yaml and packages).	2015-11-26 14:19:27 -08:00
Massimiliano Culpo	1fe626ec7c	resource directive : sketch of implementation + clang / llvm use case	2015-11-26 17:53:33 +01:00
Tom Scogland	f8ffb005c8	make cram an extension of python	2015-11-25 15:10:18 -08:00
Todd Gamblin	c526c71f56	Merge pull request #201 from alfredo-gimenez/develop Fixed Mitos dependency and added new version	2015-11-24 16:12:12 -08:00
Alfredo Gimenez	a0d388875e	Fixed Mitos dependency and added new version	2015-11-24 15:12:31 -08:00
Tom Scogland	a1553dd12b	adding google sparsehash and cityhash libraries	2015-11-24 09:23:36 -08:00
Todd Gamblin	e2412e3f21	Merge branch 'eschnett-openblas' into develop	2015-11-24 00:52:48 -08:00
Todd Gamblin	52cce2d710	Revert "WIP: openssl: set KERNEL_BITS to make ./config work"	2015-11-24 00:30:08 -08:00
Erik Schnetter	1d90d98e40	Remove commented-out code	2015-11-23 20:32:06 -05:00
Kevin Huck	4dd47fbc78	cleaning up commits for merge request	2015-11-23 16:16:52 -08:00
Todd Gamblin	98ccad8105	Merge pull request #189 from mathstuf/openssl-use-64-bits WIP: openssl: set KERNEL_BITS to make ./config work	2015-11-23 16:09:28 -08:00
Todd Gamblin	de2213a621	Merge pull request #188 from mathstuf/python-osx python: target OS X 10.6	2015-11-23 16:08:56 -08:00
Todd Gamblin	583b8e3ade	Merge pull request #187 from mathstuf/dbus-osx-disable-launchd dbus: disable launchd support	2015-11-23 16:08:35 -08:00
Todd Gamblin	b5fffc71c9	Merge pull request #168 from mathstuf/libxml2-drop-python-dep Libxml2 drop python dep	2015-11-23 16:08:24 -08:00
Todd Gamblin	0011903e23	Merge pull request #165 from mathstuf/paraview-update-deps Paraview update deps	2015-11-23 16:04:03 -08:00
Todd Gamblin	9bc27561ec	Merge pull request #164 from mathstuf/matplotlib-optional-deps Matplotlib optional deps	2015-11-23 16:03:31 -08:00
Todd Gamblin	76100a6f08	Merge pull request #158 from davidbeckingsale/features/cleverleaf Add CleverLeaf package	2015-11-23 16:00:39 -08:00
David Beckingsale	38b83362b6	Updated url and description	2015-11-23 15:58:33 -08:00
Todd Gamblin	c13329c25a	Merge pull request #155 from epfl-scitas/packages/mvapich2 packages/mvapich2 : added support for process managers and network types	2015-11-23 15:53:53 -08:00
Todd Gamblin	6798c177c6	Merge pull request #157 from alfredo-gimenez/develop Added Python Twisted library	2015-11-23 15:51:57 -08:00
Todd Gamblin	8fbd79fa2e	Merge pull request #198 from eschnett/update-papi Update PAPI	2015-11-23 15:42:09 -08:00
Erik Schnetter	60fd7e2268	Update PAPI	2015-11-23 16:50:11 -05:00
Erik Schnetter	cb21a5b309	Add OpenBLAS	2015-11-23 16:48:06 -05:00
Erik Schnetter	1330c10fc8	Don't use https for downloading	2015-11-23 16:00:10 -05:00
Todd Gamblin	be92d0b6a4	Merge pull request #194 from trws/judy add judy dynamic array/meta-trie/hash table lib	2015-11-23 10:10:46 -08:00
Todd Gamblin	7392e1af59	Merge pull request #190 from bhatele/feature/networktools Add damselfly package	2015-11-23 10:10:12 -08:00
Tom Scogland	34700d560f	add judy dynamic array/meta-trie/hash table lib Just adding judy.	2015-11-20 12:15:32 -08:00
Abhinav Bhatele	4edcc59c3d	Add damselfly package	2015-11-19 23:05:21 -08:00
Ben Boeckel	c023b1000e	python: target OS X 10.6 Targeting anything older lacks rpath stuff which configure uses.	2015-11-19 17:52:59 -05:00
Ben Boeckel	150e43f3fd	WIP: openssl: set KERNEL_BITS to make ./config work Why OpenSSL refuses to build without this (it explicitly warns about it) is a mystery.	2015-11-19 17:51:44 -05:00
Ben Boeckel	b6d368d7a0	dbus: disable launchd support	2015-11-19 17:50:30 -05:00
Todd Gamblin	34e445a480	Merge pull request #176 from truatpasteurdotfr/develop jdk: updated to version 8u66	2015-11-18 15:58:33 -06:00
Todd Gamblin	5086a1e825	Merge pull request #178 from eschnett/develop Update HDF5 to 1.8.16	2015-11-18 15:58:13 -06:00
Todd Gamblin	38ce53bc85	Merge pull request #179 from eschnett/update-hwloc Update hwloc to 1.11.1	2015-11-18 15:58:06 -06:00
Todd Gamblin	89c11221ed	Merge pull request #181 from eschnett/update-openmpi Update OpenMPI to 1.10.1; correct configure error in OpenMPI	2015-11-18 15:57:56 -06:00
Todd Gamblin	025566b494	Merge pull request #182 from eschnett/hdf5-mpi HDF5: Support non-MPICH MPI implementations	2015-11-18 15:57:29 -06:00
Todd Gamblin	4f8380959c	Merge pull request #183 from eschnett/add-jemalloc Add jemalloc package	2015-11-18 15:56:46 -06:00
Erik Schnetter	2e51e207f9	Update cmake to 3.4.0	2015-11-18 15:17:48 -05:00
Erik Schnetter	cbc552e91e	Add jemalloc package	2015-11-18 13:43:49 -05:00
Erik Schnetter	511ffc3b44	HDF5: Support non-MPICH MPI implementations	2015-11-18 13:33:04 -05:00
Erik Schnetter	e36fd7d29f	Update OpenMPI to 1.10.1; correct configure error in OpenMPI	2015-11-18 13:13:13 -05:00
Erik Schnetter	af9fe0a038	Update hwloc to 1.11.1	2015-11-18 12:37:54 -05:00
Erik Schnetter	893e05540c	Update HDF5 to 1.8.16	2015-11-18 09:55:45 -06:00
Tru Huynh	b2a85bc12e	updated to version 8u66	2015-11-18 10:02:22 +01:00
Erik Schnetter	cc49f9b657	Update OpenSSL package	2015-11-17 18:28:20 -05:00
Erik Schnetter	1003b847b6	Remove comment	2015-11-17 17:10:04 -05:00
Erik Schnetter	ad0a1bf70d	Add rsync package	2015-11-17 16:47:47 -05:00
Ben Boeckel	b98c25c1fb	paraview: update matplotlib and numpy deps	2015-11-16 17:07:28 -05:00
Ben Boeckel	5eb8e1eec8	py-pyside: update docstring	2015-11-16 17:07:27 -05:00
Ben Boeckel	d40897404b	py-matplotlib: make the gui and ipython support optional ipython, nice as it is, is not required to use matplotlib. The UI bits are also optional and dragging in Qt and Tcl/Tk for the library shouldn't be the default.	2015-11-16 17:07:27 -05:00
Ben Boeckel	485528cffa	paraview: configure the python and MPI executables	2015-11-16 17:05:17 -05:00
Ben Boeckel	d3ead7061e	paraview: require qt4 Qt5 has bugs which need at least 5.6.0 for a fix.	2015-11-16 17:04:35 -05:00
Ben Boeckel	45d981caab	paraview: add dependency on libxml2 back	2015-11-16 11:45:27 -05:00
Ben Boeckel	ca01adb503	libxml2: make the python dependency optional Also turn it off by default since it is usually not necessary. Anything needing the Python bindings should declare it explicitly.	2015-11-16 11:30:35 -05:00
Tom Scogland	8feaefadcf	updating lua package to install in correct order	2015-11-13 09:43:03 -08:00
Todd Gamblin	55662eca69	Merge branch 'develop' into mplegendre-multi_pkgsrc_roots Conflicts: lib/spack/spack/__init__.py lib/spack/spack/directives.py lib/spack/spack/packages.py	2015-11-12 15:16:06 -08:00
David Beckingsale	679b617649	Add CleverLeaf package	2015-11-11 12:33:08 -08:00
Alfredo Gimenez	666d9e88f5	Added Python Twisted library	2015-11-10 15:37:09 -08:00
Massimiliano Culpo	27c64f7740	mvapich2 : changed method name for consistency. Removed possibly duplicated flags	2015-11-09 16:02:38 +01:00
Massimiliano Culpo	42bc552dd7	mvapich2 : variant strings are associated with a named variable	2015-11-09 16:02:25 +01:00
Massimiliano Culpo	79ed9de4c1	mvapich2 : added variants for different network types	2015-11-09 16:02:12 +01:00
Massimiliano Culpo	0ae05fdf99	mvapich2 : added variants for different process managers	2015-11-09 16:01:56 +01:00
Massimiliano Culpo	4a72bd7919	mvapich2 : fixed typos. Added FIXME	2015-11-09 16:01:27 +01:00
Massimiliano Culpo	076eaba6e3	mvapich2 : fixed some issues with the package. Needs further improvment with respect to network and pm	2015-11-09 16:00:03 +01:00
Jim Galarowicz	0ced060b87	cbtf did not compile with boost 1.59, so reverted to boost 1.50 temporarily until we fix the cbtf/boost compile issues.	2015-11-06 15:15:38 -08:00
Jim Galarowicz	2aa501bf3d	Update the checksum value for the new tarball	2015-11-06 14:19:00 -08:00
Jim Galarowicz	046b348bd3	Merge remote-tracking branch 'upstream/develop' into develop Get up to date with rest of develop repository.	2015-11-06 11:55:49 -08:00
Jim Galarowicz	aa9b14aff4	Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty.	2015-11-06 11:55:20 -08:00
Jim Galarowicz	7e6b7795f1	Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty.	2015-11-06 11:53:53 -08:00
Jim Galarowicz	d6a2ab08ac	Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty.	2015-11-06 11:47:00 -08:00
Todd Gamblin	9474b8cdac	Merge pull request #153 from ktkirk/libxml2 Was getting system python over spack python	2015-11-05 10:12:55 -08:00
Gregory Lee	886861c9f4	Merge pull request #151 from scalability-llnl/features/bzip2-mac Modified bzip2 package to work properly on macs.	2015-11-05 09:29:47 -08:00
David Beckingsale	19876161c7	Update ZSH version	2015-11-05 07:42:18 -08:00
Kelly T. Kirk	618a1c7119	Was getting system python over spack python	2015-11-05 08:01:00 -05:00
Todd Gamblin	1c4ef29962	Add Sphinx package	2015-11-04 17:55:43 -08:00
Todd Gamblin	f201bfb998	Modified bzip2 package to work properly on macs.	2015-11-04 17:43:22 -08:00
Paul Dapolito	16f0ece75b	added zlib dependency to glib package specification	2015-11-01 19:55:14 -08:00
Todd Gamblin	58adff307f	Merge pull request #142 from mathstuf/dbus-disable-systemd dbus: disable systemd	2015-10-29 00:07:03 -07:00
Todd Gamblin	5d626ac561	Merge pull request #141 from epfl-scitas/packages/clang clang : updated versions + depends_on(python)	2015-10-29 00:06:50 -07:00
Todd Gamblin	11c3a9f60d	Merge pull request #143 from mathstuf/update-ncurses ncurses: update package	2015-10-29 00:03:40 -07:00
Todd Gamblin	130d2d8de0	Merge pull request #144 from mathstuf/add-paraview paraview: add package	2015-10-29 00:03:15 -07:00
Todd Gamblin	dab230845d	Merge pull request #121 from epfl-scitas/issues/gcc GCC : added variant to packages for binutils, solve linking time error	2015-10-28 23:29:33 -07:00
Ben Boeckel	ddbfc40303	paraview: add package A first attempt; builds successfully. Some dependencies have hard-coded dependencies where they shouldn't (e.g., hdf5 -> mpi, libxml -> python), but that's a different rabbit hole.	2015-10-27 15:37:31 -04:00
Ben Boeckel	b88da83a12	dbus: disable systemd Not necessary in spack. Also forcefully installs outside of the prefix.	2015-10-27 13:51:23 -04:00
Ben Boeckel	e8f5a85ffd	ncurses: update package	2015-10-27 13:50:59 -04:00
Massimiliano Culpo	3913c10afb	clang : updated versions and dependencies llvm : added dependency on 'python@2.7:' for better portability	2015-10-27 08:04:55 +01:00
Massimiliano Culpo	8b22a4f4f8	llvm : updated versions	2015-10-27 08:04:20 +01:00
Paul Dapolito	cd2a23384f	Added v5.2.2 for xz library	2015-10-26 14:28:56 -07:00
Massimiliano Culpo	e812c35689	GCC : removed binutils variant	2015-10-23 10:11:38 +02:00
Todd Gamblin	f76b3890ff	Merge pull request #137 from davidbeckingsale/features/ompi-wrappers Filter wrapper data to use correct compilers in OpenMPI	2015-10-22 16:01:55 -04:00
David Beckingsale	9f496e5efa	Replace compiler in f90 and f77 wrappers if they exist	2015-10-22 09:50:02 -07:00
David Beckingsale	41c01b523f	Filter wrapper data to use correct compilers in OpenMPI	2015-10-22 09:13:20 -07:00
Todd Gamblin	cbcc6fc9f5	Merge branch 'khuck-develop' into develop, github PR #136	2015-10-22 08:27:23 -07:00
Kevin Huck	7cb557cba7	Adding dependency on ompt-openmp, now that it is a package.	2015-10-22 08:06:31 -07:00
Kevin Huck	caf93cc408	Adding package for OMPT support in the LLVM/Clang OpenMP runtime, which gives OMPT support for applications built with GCC, Intel or LLVM/Clang.	2015-10-22 08:03:50 -07:00
Massimiliano Culpo	e6a44bd8ac	GCC : removed dependency on libelf. Removed isl variant	2015-10-22 15:55:43 +02:00
Massimiliano Culpo	f475ec4ce6	Merge branch 'develop' of https://github.com/scalability-llnl/spack into issues/gcc Conflicts: var/spack/packages/gcc/package.py GCC : removed dependency on libelf. Removed isl variant	2015-10-22 15:53:44 +02:00
Kevin Huck	24838a62b4	Changed date formatting.	2015-10-22 06:02:56 -07:00
Kevin Huck	2a61ff0794	Changing git checkout from "master" to commit d2e66ddde689120472fc57fc546d8cd80aab745c	2015-10-22 03:57:33 -07:00
Kevin Huck	fb9eca4226	Added an APEX package, but it is still using the git master instead of a release.	2015-10-21 19:35:31 -07:00
Kevin Huck	c082abfb65	Modified the binutils package to use --enable-shared. Required by tools that use binutils and get this error (or equivalent): "relocation R_X86_64_32S against `bfd_errmsgs' can not be used when making a shared object; recompile with -fPIC"	2015-10-21 18:32:57 -07:00
Todd Gamblin	1f662465c2	Merge pull request #119 from mamelara/develop Added current version 3.2 of libffi version 3.1 has a bug	2015-10-21 16:07:26 -04:00
Todd Gamblin	c8f01480d6	Merge pull request #128 from mathstuf/netcdf-new-linker-mpi netcdf: link to MPI	2015-10-21 16:02:59 -04:00
Todd Gamblin	c388cbe8e4	Merge pull request #131 from jsquyres/pr/openmpi-update openmpi: update package versions of Open MPI	2015-10-21 15:59:12 -04:00
Todd Gamblin	6773a2b3bf	Merge pull request #132 from jsquyres/pr/mpich-mpi-version-fix mpich: add fine-grained MPI conformance versions	2015-10-21 15:58:41 -04:00
Todd Gamblin	59dfb1c175	Merge pull request #134 from davidbeckingsale/features/ncdu Added ncdu package	2015-10-21 15:58:02 -04:00
Todd Gamblin	345fd3b285	Merge pull request #133 from epfl-scitas/packages/trilinos Packages/trilinos	2015-10-21 15:54:13 -04:00
Kevin Huck	e0e79a2cb3	Adding package for activeharmony.	2015-10-21 11:56:01 -07:00
David Beckingsale	7e2f3cff44	Added ncdu package	2015-10-19 15:41:46 -07:00
Massimiliano Culpo	ec5560374c	glm : added basic configuration for the package	2015-10-19 13:56:08 +02:00
Massimiliano Culpo	aab7102b9b	matio : added basic configuration for the package	2015-10-19 13:55:44 +02:00
Massimiliano Culpo	3a4bdf1856	trilinos : first version that compiles on bellatrix	2015-10-19 13:48:46 +02:00
Massimiliano Culpo	ff0d039a1f	trilinos : prototype for the whole package	2015-10-19 13:48:38 +02:00
Massimiliano Culpo	f4460894be	hdf5 : updated version mpich : updated version trilinos : created stub	2015-10-19 13:48:24 +02:00
Todd Gamblin	44ba16a391	Add libiberty option to binutils	2015-10-17 17:04:34 -07:00
Jeff Squyres	67b94acd42	mpich: add fine-grained MPI conformance versions Similar to the Open MPI and MVAPICH packages. Signed-off-by: Jeff Squyres <jsquyres@cisco.com>	2015-10-17 07:06:06 -04:00
Jeff Squyres	43f58d9f61	openmpi: update the MPI conformance for each Open MPI version	2015-10-16 15:27:22 -04:00
Jeff Squyres	f39e40664f	openmpi: add v1.10.0 and update v1.8.2->v1.8.8	2015-10-16 15:26:58 -04:00
Ben Boeckel	9ec4ae83af	netcdf: link to MPI Newer GNU linker refuses to use transitive linking; if netcdf calls MPI_Allreduce, it must link the providing library directly. Also switched to CMake because I don't know autoconf well enough to know how to put MPI stuff into it.	2015-10-15 09:20:16 -04:00
Gregory L. Lee	5dd39bfca5	bug fix for github issue 122	2015-10-08 08:12:30 -07:00
Todd Gamblin	5d64012868	Merge branch 'features/libxcb-1.11.1' into develop	2015-10-08 00:13:47 -07:00
Massimiliano Culpo	17de9a37f1	gcc : fixed spec file	2015-10-06 18:49:18 +02:00
Massimiliano Culpo	d44571257a	spec file : everything is dumped, only link rule is modified	2015-10-06 18:49:04 +02:00
Massimiliano Culpo	f068d1ba57	GCC : added variants for libelf, binutils, isl. gcc@5.0: still has issues	2015-10-06 18:48:47 +02:00
Gregory L. Lee	6fcf16b710	added libxcb version 1.11.1	2015-10-05 12:59:26 -07:00
Matthew LeGendre	18f0b24a7f	Add tests for spack external dependencies, plus fixes for issues found by those tests.	2015-10-05 11:37:36 -07:00
Matthew LeGendre	650c9d4e36	Allow spack to build against external non-spack-installed packages.	2015-10-05 11:37:36 -07:00
Matthew LeGendre	ee68a76a19	Bug fixes from testing spack preferred packages	2015-10-05 11:36:06 -07:00
Mario Melara	75d30b08fb	Added current version 3.2 of libffi version 3.1 has a bug that interferes with glib	2015-10-01 21:51:55 -07:00
Adam Moody	5563c66675	update scr to 1.1.8	2015-09-29 18:18:34 -07:00
Mario Melara	13eb461ec3	Adding bowtie2 package along with patch	2015-09-24 11:21:54 -07:00
Mario Melara	521632b3dc	Added samtools bioinformatics software	2015-09-23 16:30:44 -07:00
Todd Gamblin	6d4eed3845	Merge pull request #102 from RasmusWL/features/fish Add fish (shell) package	2015-09-23 01:37:59 -07:00
Todd Gamblin	82ea7aec51	Merge pull request #106 from justintoo/add-package-doxygen (Package) Add Doxygen (v1.8.10)	2015-09-23 01:37:31 -07:00
Todd Gamblin	d474eeb424	Merge pull request #110 from scalability-llnl/features/boostupdate update boost package for new releases	2015-09-23 00:32:22 -07:00
Todd Gamblin	5d6baacc56	Merge pull request #111 from scalability-llnl/features/protobuf add protobuf package	2015-09-23 00:31:26 -07:00
Todd Gamblin	46cf0a23d9	Merge pull request #112 from scalability-llnl/features/glog add glog package	2015-09-23 00:30:37 -07:00
Todd Gamblin	f02af701e5	Merge pull request #113 from scalability-llnl/features/gflags add gflags package	2015-09-23 00:29:50 -07:00
Todd Gamblin	5f826a0ab7	Merge pull request #114 from scalability-llnl/features/snappy Features/snappy	2015-09-23 00:27:27 -07:00
Adam Moody	84823ed828	add lmdb package	2015-09-22 12:17:01 -07:00
Adam Moody	3ade141829	add leveldb package	2015-09-22 11:59:09 -07:00
Adam Moody	30acc6f2f0	add snappy package	2015-09-21 16:45:59 -07:00
Adam Moody	22ba02b22b	add gflags package	2015-09-21 16:40:23 -07:00
Adam Moody	b5d7cd55ce	add glog package	2015-09-21 16:30:11 -07:00
Adam Moody	e4e22ed17e	add protobuf package	2015-09-21 16:19:50 -07:00
Justin Too	3691201b4f	(Package) Add Spot C++ library (v1.99.3)	2015-09-21 11:04:56 -07:00
Justin Too	99ca0f3153	(Package) Add Doxygen (v1.8.10)	2015-09-11 20:29:18 +00:00
Rasmus Wriedt Larsen	b06117f77a	Add fish (shell) package	2015-09-03 14:19:27 -07:00
Adam Moody	ac088bae6a	update boost	2015-09-01 16:02:14 -07:00
Todd Gamblin	6af49d41fd	Add elfutils.	2015-08-27 00:10:53 -07:00
Todd Gamblin	13fd742610	Merge branch 'features/pidx' into develop	2015-08-26 23:48:52 -07:00
Todd Gamblin	babbc5bb45	Minor fix-ups for PIDX	2015-08-26 23:48:36 -07:00
Gregory L. Lee	2c3e7a6f87	added graphviz dependency and dysect variant to STAT	2015-08-25 11:48:12 -07:00
Gregory L. Lee	1c9c5a385d	added graphviz and dependencies	2015-08-25 11:38:39 -07:00
Todd Gamblin	360b307f68	Save progress. import gov.llnl.spack.mpich works.	2015-08-24 09:14:16 -07:00
Gregory L. Lee	689dbb8fb6	use filter_file instead of patch	2015-08-24 08:51:41 -07:00
Jim Galarowicz	24c609b6df	Updates to the Krell related product packages.	2015-08-22 09:34:44 -05:00
Cyrus Harrison	8821715377	add version-based url map for cmake, provide md5 for cmake 3.3.1	2015-08-19 14:18:02 -07:00
Jim Galarowicz	fe9959d4da	Merge remote-tracking branch 'upstream/develop' into develop	2015-08-18 08:05:25 -05:00
Peer-Timo Bremer	40b21d7cbe	Initial version of PIDX package	2015-08-17 15:38:12 -07:00
Gregory L. Lee	bd1cd83d71	added lapack and blas deps, fixed gfortran compiler dependency	2015-08-17 11:54:14 -07:00
Todd Gamblin	a2f2e6a4ff	Save changes to external repo integration	2015-08-16 12:54:02 -07:00
Matthew LeGendre	c7b8d09c7f	Add packagerepos to spack, allowing for creating multiple package repositories.	2015-08-16 12:48:32 -07:00
Gregory L. Lee	92ea86dc36	moved lapack package to netlib-lapack	2015-08-14 16:30:35 -07:00
Gregory L. Lee	ec47ab16ce	updated blas and lapack packages	2015-08-14 16:27:51 -07:00
Todd Gamblin	c8f65c1530	Fix 2.6 incompatibility	2015-08-13 00:21:02 -07:00
Todd Gamblin	17c2a0d6f3	Merge pull request #92 from trws/flux-build pre-alpha flux build and requisite dependencies	2015-08-13 00:02:49 -07:00
Todd Gamblin	58f848fa29	Merge pull request #94 from alfredo-gimenez/dev-pandas Fixed py-pandas package	2015-08-13 00:00:35 -07:00
Todd Gamblin	f34b04e555	Merge pull request #87 from alfredo-gimenez/develop Added gui and cscope features to Vim package	2015-08-12 23:58:27 -07:00
Alfredo Gimenez	d6bf9c9887	Cscope vim variant depends on cscope	2015-08-07 07:58:04 -07:00
Alfredo Gimenez	d017c5080a	Fixed py-pandas package	2015-08-07 00:03:14 -07:00
Alfredo Gimenez	067ecb90b9	Added cscope (dependency for vim+cscope)	2015-08-06 09:28:28 -07:00
Tom Scogland	7182671f8f	pre-alpha flux build and requisite dependencies NOTE: the ncurses package now installs BOTH versions, wide and non-wide character for compatibility with packages that require either one. It may be desirable for this to be an option in the future.	2015-08-03 11:59:52 -07:00
Mike Nolta	7ebb4fcedc	add missing gmp dependency to mpfr package	2015-08-01 16:00:13 -04:00
Tom Scogland	016eef6a16	adding the bear compilation database generator	2015-07-29 14:21:03 -07:00
Alfredo Gimenez	00ab6eb616	Vim with added feature support, including gvim	2015-07-23 11:38:02 -07:00
Tom Scogland	6ad5210216	adding a zsh package	2015-07-22 11:35:51 -07:00
Jim Galarowicz	9fee7be695	Add the initial version of the OpenSpeedShop spack build file. OpenSpeedShop is an application performance analysis tool that runs on Linux and gathers a number of different types of performance data and displays that data in a command line tool (CLI) and via a graphical user interface (GUI).	2015-07-21 11:26:59 -05:00
Jim Galarowicz	e8235b10c6	Add the cbtf-lanl spack build package. cbtf-lanl is LANLs contribution to the CBTF project. It contains psTool and memTool which are example tools, showing use case examples for CBTF.	2015-07-21 11:23:23 -05:00
Jim Galarowicz	23971bae92	Add the cbtf-krell spack build package. cbtf-krell is the krell contribution to the CBTF project and includes services, messages, and core libraries and components that support performance information gathering, transfer, and reduction.	2015-07-21 11:20:27 -05:00
Jim Galarowicz	eff5016653	Add the cbtf spack build package. cbtf is the base package for the component based tool framework and is used for building and connecting cbtf components, including distributed components via the MRNet transfer mechanism.	2015-07-21 11:15:53 -05:00
Jim Galarowicz	a9c737f911	Add spack build package for Xerces-C which is a supporting package for the krell related projects.	2015-07-21 10:59:52 -05:00
Jim Galarowicz	f5093094eb	Add the cbtf-argonavis project package file. cbtf-argonavis is a project based on CBTF that supports performance analysis of GPU applications.	2015-07-21 10:58:16 -05:00
Jim Galarowicz	15ec3cb3cd	Add qt3 version support and a variant that controls patching the qt3 version for compile issues and answering yes to the license questions during build.	2015-07-21 10:51:53 -05:00
Jim Galarowicz	b4e0804b37	Add the latest version to the papi package.	2015-07-21 10:50:11 -05:00
Jim Galarowicz	64c8fd3fa1	Add krelloptions variant that is used to turn on a configuration option to build the thread safe lightweight libraries.	2015-07-21 10:49:15 -05:00
Jim Galarowicz	13421dc4aa	Add patches that enable features added for krell related products. Update the package file to add a krellpatch variant to control adding the patches.	2015-07-21 10:20:05 -05:00
Jim Galarowicz	0591980cbe	Add configuration change for krell related products, they expect the dyninst includes in include/dyninst.	2015-07-21 10:17:37 -05:00
Jim Galarowicz	d1f127d8ef	Add changes for krell related products to binutils. Add a patch that installs libiberty_pic.a which krell products will favor/use.	2015-07-21 10:15:17 -05:00
Todd Gamblin	e097696390	Update concretize to check for more changes and iterate further.	2015-07-16 01:12:11 -07:00
Todd Gamblin	8828dbf2e8	Remove superfluous print in vim.	2015-07-14 23:48:07 -07:00
Todd Gamblin	2e90599283	Merge branch 'develop' of github.com:scalability-llnl/spack into develop	2015-07-14 23:43:59 -07:00
Todd Gamblin	6f8a4318c5	Remove python 2.6-incompatible format expression.	2015-07-13 18:25:18 +00:00
Tom Scogland	889485181e	adding gnu global tags and exuberant ctags	2015-07-10 13:54:38 -07:00
Tom Scogland	fda208f6b8	adding YAPF (Yet Another Python Formatter)	2015-07-09 14:55:27 -07:00
Gregory L. Lee	2e37523428	for LaunchMON added latest git commit and dependences	2015-07-08 11:25:41 -07:00
Gregory L. Lee	ddfc276688	removed workaround	2015-07-02 15:14:30 -07:00
Florent Pruvost	e06d351f7a	add cblas headers in install directory	2015-07-02 02:05:00 -07:00
Todd Gamblin	7625881cb3	Merge pull request #75 from alfredo-gimenez/develop Thanks!	2015-07-02 01:27:47 -07:00
Todd Gamblin	6f94a2567b	Add py-lockfile and py-python-daemon packages.	2015-07-02 00:40:25 -07:00
Alfredo Gimenez	25c1678004	Commented out old version	2015-06-23 17:39:23 -07:00
Alfredo Gimenez	9f27ddc256	New mpfr release invalidates previous download link (not sure where old version is...)	2015-06-23 17:36:57 -07:00
Todd Gamblin	a51d4afe3e	Minor simplification (os.environ -> env)	2015-06-20 20:25:12 -07:00
Alfredo Gimenez	314ecc54fe	Thrift python support	2015-06-18 17:29:16 -07:00
Alfredo Gimenez	f832719ceb	Added silo 4.8 with HDF5 (for LULESH 2.0)	2015-06-18 12:31:01 -07:00
Alfredo Gimenez	0c028e24b4	Removed Lua dependency	2015-06-18 10:30:02 -07:00
Alfredo Gimenez	55e24548c3	Added Thrift (HBase management in C++)	2015-06-18 10:29:34 -07:00
Tom Scogland	912c29471a	adding python pyelftools package	2015-06-17 15:19:46 -07:00
Todd Gamblin	607f263fbc	Merge pull request #61 from alfredo-gimenez/develop Mitos 0.9.1	2015-06-11 16:31:28 -07:00
Todd Gamblin	3cb10f92af	Merge pull request #62 from trws/tmuxinator Partial ruby extension and tmuxinator package	2015-06-11 16:31:15 -07:00
Todd Gamblin	9955df896b	Merge pull request #63 from trws/silver-searcher adding package for the silver searcher	2015-06-11 16:31:04 -07:00
Tom Scogland	a087fd71e4	Removing comment line Missed that the auto-generated comment line stuck around.	2015-06-11 13:57:19 -07:00
Tom Scogland	d92ac2a6b2	Small ruby enhancement and tmuxinator package It is currently less painful to pull the source from github, compile it into a gem, then install the gem, than it is to download a gem and install it. This still lacks an activation mechanism, but `spack use tmuxinator` is functional.	2015-06-11 13:51:53 -07:00
Alfredo Gimenez	afe3c5b6bb	Mitos 0.9.1	2015-06-11 11:02:51 -07:00
Tom Scogland	cd581d1d5a	adding package for the silver searcher	2015-06-10 14:24:38 -07:00
Tom Scogland	2d465ffd10	partial upgrade to vim package	2015-06-10 14:14:31 -07:00
Todd Gamblin	04bcf43649	Merge pull request #58 from trws/python-cffi Python cffi	2015-06-10 00:36:37 -07:00
Todd Gamblin	874326a1ad	Merge pull request #56 from trws/uuid-task-and-taskd package files for libuuid, needed for flux and taskwarrior packages	2015-06-10 00:35:30 -07:00
Tom Scogland	c8ad456fd6	nettle depends on gmp, without it the nettle build fails on gcc 4.9.2	2015-06-09 19:37:42 -07:00
Tom Scogland	8839eeb421	new package files for python-cffi and its dependency pycparser	2015-06-09 19:36:08 -07:00
Tom Scogland	eab3d4811e	package files for libuuid, needed for flux and taskwarrior packages, along with the taskwarrior packages	2015-06-09 19:26:49 -07:00
Todd Gamblin	e64c0f4e4e	Fix Boost finding in Dyninst 8.2.1.	2015-06-09 17:48:38 -07:00
Todd Gamblin	bde9c7eee3	Upate ATLAS and netlib-blas.	2015-06-07 15:41:15 -07:00
Todd Gamblin	0570660d81	Make blas a virtual dependency, default netlib-blas.	2015-06-06 18:23:12 -07:00
Todd Gamblin	26b9592780	Add disablement of cpu throttle check.	2015-06-06 18:19:05 -07:00
Todd Gamblin	8b9dcfe635	Delete lapack/atlas combined package.	2015-06-06 18:18:51 -07:00
Todd Gamblin	5d94864b6c	Rename netlib_blas -> netlib-blas	2015-06-06 18:18:44 -07:00
Todd Gamblin	50d7b3df2b	Merge branch 'psaravan-fastmath' into features/fastmath Conflicts: var/spack/packages/lapack/package.py	2015-06-06 18:17:59 -07:00
Todd Gamblin	8215c85619	Merge branch 'develop' into features/fastmath	2015-06-06 18:15:52 -07:00
Todd Gamblin	c43b5d670b	Remove dummy fastmath package.	2015-06-06 17:48:33 -07:00
Todd Gamblin	b6ad37557f	fix up Saravan's petsc install	2015-06-06 17:41:15 -07:00
Todd Gamblin	d266bf0184	Working Hypre, PARPACK.	2015-06-06 17:21:11 -07:00
Todd Gamblin	5294e2b9b9	CGM package working on cab.	2015-06-06 16:56:59 -07:00
Todd Gamblin	c5ab3f4e82	CBLAS package working and patching in spack compilers.	2015-06-06 16:29:37 -07:00
Todd Gamblin	f29fc5822b	Working boxlib package.	2015-06-06 16:16:19 -07:00
Todd Gamblin	b9746de52e	Working ARPACK package.	2015-06-06 15:26:54 -07:00
Todd Gamblin	03780ea105	Remove autosave files from saravan's PR	2015-06-06 15:26:54 -07:00
Todd Gamblin	422a75e4b8	Clean up arpack build, use the Spack f77 compiler.	2015-06-06 15:26:54 -07:00
Saravan Pantham	1f0246f970	Updated HDF5 to use MPI.	2015-06-06 15:26:43 -07:00
Saravan Pantham	9d71093500	Updated Zoltan.	2015-06-06 15:26:42 -07:00
Saravan Pantham	fd34f4b119	Added more FASTMath packages.	2015-06-06 15:26:38 -07:00
Saravan Pantham	c174fe6199	Fixed BLAS and Lapack installations	2015-06-06 15:26:31 -07:00
Saravan Pantham	d461aa3722	Added Lapack package	2015-06-06 13:06:18 -07:00
Saravan Pantham	a23e1579e3	Added BLAS package	2015-06-06 13:06:17 -07:00
Todd Gamblin	ab31f989db	Merge Alfredo's Mitos changes from github with Greg's Python changes.	2015-06-06 12:53:28 -07:00
Gregory L. Lee	96ec75f7fe	Merge branch 'develop' of ssh://cz-stash.llnl.gov:7999/scale/spack into develop	2015-06-04 15:49:57 -07:00
Gregory L. Lee	5ac5c021b8	new package versions	2015-06-04 15:49:55 -07:00
Alfredo Gimenez	dae33a31c0	Dyninst 8.2.1+ dependency for cmake	2015-06-03 22:02:47 -07:00
Alfredo Gimenez	15aee0de1a	Mitos updated with new release	2015-06-03 21:58:44 -07:00
Gregory L. Lee	c4f5a881e6	new Python extensions	2015-06-03 10:08:07 -07:00
Gregory L. Lee	6dffe2ddd1	updated url	2015-06-03 10:07:21 -07:00
Gregory L. Lee	74b0a9c059	updated Python extension versions	2015-06-01 08:39:01 -07:00
Gregory L. Lee	83af842a74	fixed cython activation conflict	2015-06-01 08:38:32 -07:00
Todd Gamblin	f813d823a1	Merge branch 'features/optional-deps' into develop This includes: - Much better variant support (+debug/-debug) - Optional dependency support (depends_on(... , when='<condition>') - New config file format (YAML in ~/.spack) - New Spec format (YAML in $prefix/.spack/spec.yaml)	2015-05-18 16:16:20 -07:00
Matthew LeGendre	46b91ddf57	YAML config files for compilers and mirrors	2015-05-18 16:01:21 -07:00
Gregory L. Lee	50970b72d8	added py-pandas	2015-05-12 13:47:48 -07:00
Todd Gamblin	cd5fa128c5	Work on SPACK-41: Optional dependencies work for simple conditions. - Can depend conditionally based on variant, compiler, arch, deps, etc - normalize() is not iterative yet: no chaining depends_ons - really need a SAT solver, but iterative will at least handle simple cases. - Added "strict" option to Spec.satisfies() - strict checks that ALL of other's constraints are met (not just the ones self shares) - Consider splitting these out into two methods: could_satisfy() and satisfies() - didn't do this yet as it would require changing code that uses satisfies() - Changed semantics of __contains__ to use strict satisfaction (SPACK-56) - Added tests for optional dependencies. - The constrain() method on Specs, compilers, versions, etc. now returns whether the spec changed as a result of the call.	2015-05-12 09:56:59 -07:00
Todd Gamblin	ef9deeccd1	Merge branch 'features/yaml-spec' into features/optional-deps	2015-05-10 19:28:47 -07:00
Todd Gamblin	43e5465592	Fix bug in directory layout hidden files()	2015-05-10 17:56:27 -07:00
Todd Gamblin	3b1898b8e4	Fix SPACK-40: Finish adding variant directive. - Variants are now declarable in packages using the variant() directive. - Variants are checked - you can't just ask for a random variant, it has to be declared. - conditional logic (@when, if, '+debug' in spec, etc.) still required in package to implement variant.	2015-05-10 12:24:03 -07:00
Cyrus Harrison	8c4fe6d249	added simple spack package files for uncrustify and cppcheck	2015-04-30 22:42:53 -07:00
Alfredo Gimenez	0f5b26c9cd	MemAxes and Mitos	2015-04-09 14:46:33 -07:00
Todd Gamblin	37a5c3b09f	Version bump for adept-utils	2015-04-01 00:05:26 -07:00
Matthew LeGendre	89731d4a7d	Add binutils as a gcc dependency so it doesn't use the system linker/assembler.	2015-03-30 14:23:02 -07:00
Matthew LeGendre	50687e08cb	Fix QT with gcc 4.9 build error where QT's -Wl,--no-undefined interfered with gcc's implicit libgcc_s.so library	2015-03-27 17:32:37 -07:00
Todd Gamblin	c10773503b	Merge branch 'benjaminwalters-develop' into features/blas Conflicts: var/spack/packages/lapack/package.py	2015-03-26 00:31:34 -07:00
Todd Gamblin	fa53bb835c	Merge branch 'kev40293-develop' into features/blas	2015-03-26 00:12:41 -07:00
Benjamin Walters	1b75b34eb6	Removed subprocess.call calls and replaced with spack symlink calls	2015-03-19 04:37:21 -05:00
Benjamin Walters	3d2df174d1	Added package files for Lapack (has virtual dependency blas) and Netlib blas (provides virtual dependency blas).	2015-03-19 03:20:24 -05:00
Todd Gamblin	32244ac733	MPICH provides environment vars to make MPI compilers behave like spack.	2015-03-13 13:32:24 -07:00

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1358 commits