Commit graph

2676 commits

Author SHA1 Message Date
Denis Davydov
7cb756cdbb tree: use Spack's compiler and fix installation on macOS (#2293) 2016-11-10 21:52:22 -08:00
Axel Huebl
26ed2327ae Packages: Add libwebsockets (#2288)
This adds the built recipe for
[libwebsockets](https://libwebsockets.org/lws-api-doc-master/html/index.html),
a *C library for lightweight websocket clients and servers*.

GitHub Repo: https://github.com/warmcat/libwebsockets

Downstream Usage:
  In [ISAAC](https://github.com/ComputationalRadiationPhysics/isaac)
which is an *in situ visualization library* based on
  [alpaka](https://github.com/ComputationalRadiationPhysics/alpaka)
and/or CUDA which is used in
  [PIConGPU](https://github.com/ComputationalRadiationPhysics/picongpu).
2016-11-10 21:51:50 -08:00
Adam J. Stewart
99cf7b4ab3 Run HDF 5 tests post-installation (#2297) 2016-11-10 21:50:32 -08:00
christianbaensch
2e11e7e456 Update package.py with/out CUDA support (#2266)
Adding some lines to prevent from using any CUDA stuff, if NVIDIA CUDA Developement Kit was installed before.
2016-11-09 07:37:40 -08:00
Massimiliano Culpo
e5edac8af6 zlib, tar: passed to AutotoolsPackage (#2273) 2016-11-09 07:37:08 -08:00
Gregory Lee
1b64213b10 added numpy version 1.11.2 and moved url to pypi.io (#2286) 2016-11-09 07:35:30 -08:00
Oliver Breitwieser
98f27a89ec Add py-pudb package (#2289) 2016-11-09 07:34:30 -08:00
Oliver Breitwieser
68f79043aa Add 1.5.3 for py-matplotlib and moved to pypi.io (#2271)
* Added version 1.5.3 for py-matplotlib

* Updated url to pypi.io so all versions are properly downloaded.
2016-11-09 07:34:17 -08:00
Sergey Kosukhin
4457c6a2ad Updated environment-modules package: (#2279)
Added 'lib64' directory as a possible option where tclConfig.sh file can be found.
2016-11-08 07:19:31 -08:00
Pramod Kumbhar
ba58a9f30d fix tau installation issue (#2269)
* fix tau installation issue : setup_environment() is
called before install phase when 'Makefile.*' doesn't
exist (causing list index out of range error).

* Added detailed comment suggested by @alalazo
2016-11-08 07:18:14 -08:00
Gregory Lee
1f5ca24197 Merge pull request #2197 from skosukhin/ext_bugfix
Updated python package reflecting the changes in 9347f86
2016-11-07 16:05:57 -08:00
Adam J. Stewart
ca5f713282 Further restrict versions of GCC patched (#2259) 2016-11-06 15:31:48 -08:00
Michael Kuron
6f2c05b888 Add PFFT parallel FFT package (#2255)
* Add PFFT parallel FFT package

* pfft: fix non-double precision
2016-11-05 12:19:19 -07:00
Massimiliano Culpo
6c1113769b mpich: updated package to build_systems (#2254)
* mpich: updated package to build_systems

* qa : flake8 issues
2016-11-05 11:23:57 -07:00
Adam J. Stewart
6d1c32d46a Add STAR-CCM+ package (#2202)
* Add STAR-CCM+ package

* Cleanup commented out code
2016-11-04 23:16:20 -07:00
Sergey Kosukhin
6dfc536ecd Updated py-netcdf: added dependency on py-setuptools. (#2213) 2016-11-04 23:15:55 -07:00
George Hartzell
bcee2ca162 New texlive release, updating the digest to match (#2218)
* November 1 seems to have brought a new texlive release, updating the
digest to match.

Also switching the url from their automagic mirror to an explicit
site to avoid inconsistencies during their updates.

It seems like only yesterday (#2073) that I updated this....

* Add comment to url warning about mirror updates

Add a comment to the download info warning to use a
specific site rather than the mirror, to avoid wobbles
during their asynchronous updates.

* Fix typo ('to no' -> 'do not')
2016-11-04 23:14:48 -07:00
Axel Huebl
c3d9dda0e5 libSplash: Add 1.6.0 Release (#2244)
* libSplash: Add 1.6.0 Release

Add the latest release of libSplash, version 1.6.0.

* Fix flake8 checks (another loop inversion issue)
2016-11-04 16:27:17 -07:00
Gregory Lee
ee6eb508cb patch older config.guess for newer architectures (#2221) 2016-11-04 12:12:37 -07:00
Jeffrey Salmond
472ad39db3 updates to matio package (#2243)
* updates to matio package

- update to a AutoTools package
- add variants for hdf5 and zlib
- add latest version

* fix flake8 error
2016-11-04 11:56:47 -07:00
Jeffrey Salmond
f01b9797d7 opencoarrays package fixes and new version (#2239)
* fix and simplify opencoarrays package using new CMakePackge methods

* add new version
2016-11-04 11:50:25 -07:00
Jeffrey Salmond
a135a1245a tweaks to packages using CMakePackage (#2241)
* fix to trilinos package

* fix to dealii package

* fix to everytrace package

* fix to everytrace-example package

* changes suggested by @davydden
2016-11-04 10:57:53 -07:00
Denis Davydov
29f81b7775 trilinos: switch to CMakePackage and minor cleanup (#2226) 2016-11-04 02:00:03 -07:00
Denis Davydov
453331dba0 dealii: switch to CMakePackage and minor cleanup (#2237) 2016-11-04 01:46:39 -07:00
Pramod Kumbhar
b706da1109 Set TAU_MAKEFILE env variable (#2210)
* In order to use TAU module, we have to set TAU_MAKEFILE env variable.

* updated with suggestions from @citibeth
2016-11-02 15:05:47 -05:00
Sergey Kosukhin
8fb5cb2137 Added first version of the NCL package. (#2195)
Without GRIB2 and HDF-EOS support yet.
2016-11-02 10:20:57 -05:00
Peter Doak
1aa5d4875e Nmap package added (#2206)
* works to build newest version of nmap with gcc@5.3.0

* formatting

* clean up
2016-11-01 16:10:39 -07:00
Sergey Kosukhin
62eba4774d Updated python package reflecting the changes in 9347f86 2016-11-01 16:15:34 +01:00
Barry Smith
a714377123 python: PYTHONHOME may not be the same as the prefix of the python executable (#2173)
On MacOS, brew installs /usr/local/bin/python but the Python prefix is not /usr/local/bin
Use the python command sys.exec to get the correct directory, instead of the ad hoc self.prefix
previously used

This was a bear to debug; been driving me nuts since I started using spack.
Since spack passes PYTHONHOME down to package builds in the environment
it was passing PYTHONHOME of /usr/local/bin to the PETSc build that uses Python so
the PETSc Python ./configure errored immediately with

ImportError: No module named site

since python could find no python modules. Todd Gamblin pointed out that my first try to fix
this was wrong since it assumed the spack python was the same python used to run spack. Elizabeth Fischer
suggested how to get it to work also with python3

Funded-by: IDEAS
Project: IDEAS/xSDK
Time:  7 hours
Thanks-to: Todd Gamblin, Elizabeth Fischer
2016-10-30 17:13:16 -07:00
Gregory Lee
dbd9f1c5a1 updated gtk and gobject dependences (#2126) 2016-10-30 11:50:36 -07:00
Adam J. Stewart
893b2e4f62 Update license directory for intel-paralel-studio (#2163) 2016-10-29 14:30:00 -07:00
Joseph Ciurej
c82985cb5e Update and Clean Up the Visit and VTK Packages (#2167)
* Made some refactoring improvements to the 'visit' and 'vtk' packages.

* Added a small fix for the 'vtk' package when building with 'qt+webkit'.
2016-10-28 17:59:21 -07:00
Adam J. Stewart
dd53ddb003 Add latest version of Intel Parallel Studio XE (#2151) 2016-10-27 12:58:31 -07:00
Barry Smith
eb36b2a622 Get Trilinos 12.6.2 to build with Intel compilers and spack (#2102)
Funded-by: IDEAS
Project: IDEAS/xSDK
Time:  2 hours
2016-10-26 21:52:29 -07:00
Axel Huebl
0007877944 libSplash: Add 1.5.0 Release (#2137)
Add the latest release of libSplash, version 1.5.0.
2016-10-26 14:23:09 -07:00
Denis Davydov
46433b9eb3 require fortran for MPI providers to avoid delayed compiler errors (#1937)
* openmpi: require fortran for now

* mpich: requre fortran for now

* mvapich2: require fortran for now

* openmpi: flake8 fixes
2016-10-26 09:12:26 -07:00
Jim Galarowicz
92f17eeba7 Develop: Resolve issue 2070 with new depends_on clause in the openspeedshop package file. (#2136)
* Update the krell institute products to use the latest features of spack for building on cluster platforms.

* Address travis error messages and resubmit the pull request.

* Update the contents of openspeedshop package.py so it passes the flake8 tests.

* Fix flake8 error-whitespack issue in mrnet package.py file.

* Add updates based on spack reviewer feedback.

* More fixes based on comments from reviewers.  Switch using extend to using append, remove additional setting of PATH and LD_LIBRARY_PATH that should not be required due to RPATH.

* More review related changes.  Update MPIOption.append lines and take out xercesc references.

* Create a base options function for common openspeedshop base cmake options to reduce redundencies.

* Add libxml2+python depends on to get around issues with the libxml2 package file.
2016-10-26 08:37:02 -07:00
Denis Davydov
33fb7bbd1b add a unit test for conretization with develop version (#2064) 2016-10-26 01:49:52 -07:00
Denis Davydov
e65c9f6865 veclibfort: add new package (#2080)
* veclibfort: add new package

* veclibfort: add a small test
2016-10-26 01:49:06 -07:00
George Hartzell
89c1d361b2 Add package for ant (#2133)
Add a package for ant, a java build tool.
2016-10-25 23:57:27 -07:00
George Hartzell
37dede3163 Add package for maven (#2132)
Add a package that installed the pre-built maven distribution.

I've given up, for now, on building maven from source.  That processed
stumbled on two points before I gave up:

1. It downloaded several hundred .{pop,jar} files and I despaired of
   figuring out some way of mirroring and checksumming them; and

2. It exploded complaining about too many unacceptable license files,
   which seems odd in its own source tree.

Perhaps someone with more Java fu that I admit to can figure it out.
In the meantime, this is useful.
2016-10-25 23:56:31 -07:00
Barry Smith
3de26ff3d7 openblas: Fixes to get OpenBLAS to install with Intel compilers (#2101)
Funded-by: IDEAS
Project: IDEAS/xSDK
Time: 1 hour
2016-10-25 11:12:22 -07:00
Stephen Herbein
14e3a541e1 Add latest versions of Flux prerequisites (#2108)
* libsodium: add latest versions, fix old versions

older versions of libsodium were added to an "old" subdirectory

* zeromq: add 4.1.4

prerequiste for the latest develop version of flux
2016-10-25 11:11:23 -07:00
Mayeul d'Avezac
65c250699f pkg-config variant to use internal glib (#2104)
Pkg-config depends on glib which depends on pkg-config. As a result,
pkg-config used to build glib internally. However, this fails on Mac.
Building pkg-config with an internal glib is now a variant, turned on
by default, and required to build glib.
2016-10-25 11:08:32 -07:00
Adam J. Stewart
08300ccffb Allow newer versions of GCC to compile older versions of GCC (#2107)
* Add patch allowing GCC 6 to compile GCC 5

* Expand patch version range
2016-10-25 11:06:33 -07:00
George Hartzell
14ed97f219 Update cask to v0.8.1 (#2125) 2016-10-25 10:58:50 -07:00
Adam J. Stewart
eeded917cd Rename xpyb to py-xpyb (#2120) 2016-10-25 10:10:16 -07:00
Mayeul d'Avezac
1928d83259 Tells boost explictly about python libraries and headers (#2106)
* Tells boost explictly about libraries and headers

Ideally, bjam would determine the libraries and headers from the
executable. But it doesn't. This rigs a best guess for python libraries
and headers.

* Move glob import to top of file

* variable name change: alllibs --> all_libs

* Use dso suffix rather than hard-coded string

* Use only MAJOR.MINOR when setting up python in bjam
2016-10-25 08:10:52 -07:00
Massimiliano Culpo
b27e78cd78 spack setup : fixed regression after #1186 (#2117) 2016-10-25 07:53:11 -07:00
Denis Davydov
d7b624457f gmp: fix a bug (#2114) 2016-10-25 07:08:52 -07:00