Massimiliano Culpo
6a9df34abd
ASP-based solver: discard unknown packages from reuse ( #30357 )
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* ASP-based solver: discard unknown packages from reuse
This is an add-on to #28259 that cover for the case of
a single package.py being removed from a repository,
rather than an entire custom repository being removed.
* Add unit test
2022-04-28 10:40:28 -07:00
Frédéric Simonis
1006dd54de
Add BUILD_TESTING to standard CMake arguments ( #30374 )
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CTest determines whether to enable tests using the BUILD_TESTING variable.
This should be used by projects to conditionally enable the compilation of tests.
Spack knowns which packages have to run tests and can thus automatically define this variable.
2022-04-28 17:03:13 +00:00
Andrea Valenzuela
cf905ec14a
Add checksum for py-poetry-core@1.0.8 ( #30359 )
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Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
2022-04-28 11:24:08 -05:00
Andrea Valenzuela
19bb4bdeb8
Add checksum for py-more-itertools@8.12.0 and fix python dependency ( #30325 )
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* Add checksum for py-more-itertools@8.12.0 and fix python dependency
* Package version 8.11.0 is the only version that requires python 3.6+
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add reference to python 3.6 dependency
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-28 10:23:10 -06:00
Andrew Davison
47f9e71302
py-quantities: add versions from 0.12.2-13.0 ( #28586 )
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* py-quantities: add versions from 0.12.2-13.0
* Attempt to fix the version specification
* add maintainer, implement suggestions from reviewer
2022-04-28 11:14:50 -05:00
Chris White
2e9da47a2d
Ascent/Conduit: re-add fortran compiler that was mistakenly removed ( #30351 )
2022-04-28 07:09:40 -07:00
Greg Becker
3e863848f8
build_env/test_env: add concretizer args ( #30289 )
2022-04-28 11:37:15 +02:00
Harmen Stoppels
e7a0b952ab
install --overwrite: use rename instead of tmpdir ( #29746 )
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I tried to use --overwrite on nvhpc, but nvhpc's install size is 16GB. Seems
better to do os.rename in the same directory than moving the directory to
`/tmp`.
- [x] install --overwrite: use rename instead of tmpdir
- [x] use tempfile
2022-04-28 01:42:42 -06:00
Patrick Broderick
8b85b33ba5
Add spiral fftx ( #28583 )
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* add fftx package; rename spiral to spiral-software and add spiral-package-*
* Update year in copyright notice
* Add package description to FFTX/package.py
* Changes to package files for SPIRAL & FFTX for PR
* Update package definitions
* remove unnecessary lines
2022-04-27 22:26:44 -07:00
Larry Knox
90dafdd9f0
Add HDF5 version 1.12.2. ( #30348 )
2022-04-27 22:50:28 -06:00
Paul R. C. Kent
d989478154
llvm: Add 14.0.1 14.0.2 ( #30347 )
2022-04-27 20:22:40 -06:00
Wileam Y. Phan
ebd930ace9
Add Python chmod +x equivalent in fpm package ( #30342 )
2022-04-28 00:16:19 +00:00
Erik Schnetter
53e0e7aabe
z3: New version 4.8.16 ( #30328 )
2022-04-27 17:10:15 -07:00
dlkuehn
27cbc4ebc8
tcsh: add version 6.24.00 ( #30346 )
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Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-04-27 23:43:06 +00:00
Asher Mancinelli
2515cafb9c
hiop: Enable barebones testing ( #30313 )
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* Enable barebones testing
Run 6 test cases representative of the entire HiOp test suite.
* Apply style changes
* Dont use unpacking for py2 compat
2022-04-27 23:08:33 +00:00
Annop Wongwathanarat
5593611b5e
armpl: add new package ( #30305 )
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Co-authored-by: Annop Wongwathanarat <annop.wongwathanarat@arm.com>
2022-04-27 15:25:47 -07:00
dlkuehn
f544b051c4
orthofinder: add version 2.5.4 ( #30344 )
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Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-04-27 22:23:34 +00:00
Luc Berger
c534e70950
Kokkos: update package for release 3.6.00 ( #30315 )
2022-04-27 13:52:15 -07:00
Paul Ferrell
9ffb3b4ac0
mvapich2 MPI_ROOT needed in modules ( #30335 )
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We've found that when using mvapich2 via modules, we need to set the MPI_ROOT
environment variable.
2022-04-27 13:41:06 -07:00
kwryankrattiger
893c5271ac
Update ascent and deps for 0.8.x ( #29954 )
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* Update package versions for Ascent/SDK
* Umpire build static for cuda from dray
* Propagate cuda_arch for ascent and dray packages.
* Ascent: Update dependency versions for ascent@0.8:
* VTK-h: Patch +shared+cuda for VTK-h 0.8.x
* Ascent: Patch to allow @0.8: +shared+cuda
* Turn off building ascent tests.
* Update ascent patch
* WIP: Ascent: Update patch to configure MPI build with CUDA
* Ascent: Tests require vtk-m+testlib
* WIP: Ascent: Constrain 0.7 for vtk-h
* Ascent: Directly depend on VTK-m
2022-04-27 13:39:18 -06:00
eugeneswalker
f7a9456553
e4s ci: uncomment umpire ( #29776 )
2022-04-27 18:22:46 +00:00
kwryankrattiger
8250235207
Mesa: Constrain compatible LLVM version ( #30102 )
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Base on release date, not actual compatibility, because LLVM
version compatibility is not documented clearly in Mesa for
upper version limits.
2022-04-27 12:03:02 -06:00
Lucas Frérot
eb51591b02
SCons: added versions 4.0.0-4.3.0 ( #30296 )
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* SCons: added versions 4.0.0-4.3.0
* scons: correct package name casing in url_for_version
2022-04-27 11:08:30 -05:00
Brian Van Essen
06e7249850
Allow PyTorch to forward gcc-toolchain cxxcflag to CUDA toolchains ( #30318 )
2022-04-27 10:48:06 -05:00
Martin Diehl
c4ad003af2
damask-*: add v3.0.0alpha6 ( #30124 )
2022-04-27 16:01:36 +02:00
dependabot[bot]
1243717012
build(deps): bump actions/checkout from 2 to 3.0.2 ( #30235 )
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Bumps [actions/checkout](https://github.com/actions/checkout ) from 2 to 3.0.2.
- [Release notes](https://github.com/actions/checkout/releases )
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md )
- [Commits](https://github.com/actions/checkout/compare/v2...2541b1294d2704b0964813337f33b291d3f8596b )
---
updated-dependencies:
- dependency-name: actions/checkout
dependency-type: direct:production
update-type: version-update:semver-major
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Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-04-27 13:47:50 +02:00
snehring
da3d315cba
blat: add v37 ( #30166 )
2022-04-27 12:26:57 +02:00
Michael Kuhn
48ff4c7679
rust: add 1.60.0 and fix libgit2 incompatibility ( #30123 )
2022-04-27 12:22:52 +02:00
liuyangzhuan
9fc6494a28
Added GPTune v3.0.0 and its dependency py-pymoo ( #30119 )
2022-04-27 12:21:44 +02:00
Valentin Volkl
9d4cedac51
tauola: fix ~lhapdf ( #30190 )
2022-04-27 12:16:08 +02:00
Derek Ryan Strong
f66139dfe4
Add fix for binutils 2.38 +gas makeinfo issue ( #30209 )
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Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-04-27 12:11:48 +02:00
nfurmento
79e0a3dad0
Starpu and Fxt: new packages ( #29285 )
2022-04-27 12:10:09 +02:00
dependabot[bot]
3dbbf3a101
build(deps): bump codecov/codecov-action from 3.0.0 to 3.1.0 ( #30234 )
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Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action ) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/codecov/codecov-action/releases )
- [Changelog](https://github.com/codecov/codecov-action/blob/master/CHANGELOG.md )
- [Commits](e3c560433a...81cd2dc814
2022-04-27 11:26:19 +02:00
Harmen Stoppels
f273e7d329
openmpi: add toggle for rsh plm ( #30251 )
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By default `openmpi` needs `rsh` from `openssh`, which is a somewhat
redundant dependency for clusters using slurm. This PR adds a toggle to
allow users to disable the ssh/rsh plm altogether.
2022-04-27 11:15:48 +02:00
snehring
351072cd9f
gcta: rework package recipe ( #30286 )
2022-04-27 08:56:31 +00:00
Adam J. Stewart
0b23f1be05
py-pil: deprecate package ( #30308 )
2022-04-27 02:34:29 -06:00
Glenn Johnson
b8015a71e9
relion: add altcpu variant and fix fftw ( #30097 )
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This package was not setting FFTW when +mklfft was used with +cuda.
Since both were set to 'True', the default build was not linked to
any FFTW, leading to a run time error. It seems MKL support was
conflated with alternative CPU acceleration support. This PR does the
following:
- adds the altcpu variant to specify non-GPU/CPU acceleration
- sets a conflict between +altcpu and +cuda
- sets an FFTW implementation
- sets fltk+xft when +gui to get a decent looking GUI interface
- sets tbb dependency only when +altcpu
- adds dependency on ctffind
- adds variant and dependency on motioncor2
- sets defaults for
- qsub template location
- ctffind location
- motioncor2 location
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2022-04-27 10:30:39 +02:00
snehring
739f040fa8
bucky: fix compile errors with newer gccs ( #30314 )
2022-04-27 02:11:02 -06:00
Massimiliano Culpo
d5fc859f46
ASP-based solver: handle installed specs from unknown namespaces ( #30092 )
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fixes #28259
This commit discard specs from unknown namespaces from the
ones that can be "reused" during concretization. Previously
Spack would just error out when encountering them.
2022-04-27 02:10:46 -06:00
Erik Schnetter
753f4a4bc3
reprimand: update requests on boost ( #30109 )
2022-04-27 09:46:22 +02:00
Lhxone
8c280d98ca
suntans: add new package ( #30149 )
2022-04-27 09:35:40 +02:00
eugeneswalker
d5e1fa5771
py-cryptography@35: tell cargo to use cli git, not cargo internal git… ( #30307 )
2022-04-26 20:58:28 -06:00
Michael Kuhn
f30b79b2c5
libgit2: add 1.4.3 and 1.3.1 ( #30122 )
2022-04-26 20:54:30 -06:00
Erik Schnetter
54146d44f9
fossil: New package ( #30311 )
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* fossil: new package
* fossil: Format code
2022-04-27 00:47:24 +00:00
Tamara Dahlgren
0c31ab87c9
Feature: Allow re-use of run_test() in install_time_test_callbacks ( #26594 )
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Allow re-use of run_test() in install_time_test_callbacks
Co-authored-by: Greg Becker <becker33@llnl.gov>
2022-04-26 17:40:05 -07:00
Lhxone
e49cccb0d9
New package: CaNS ( #30218 )
2022-04-27 00:33:36 +00:00
haralmha
7a1841c464
hadoop: Update url and add version 3.3.2 ( #29812 )
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* hadoop: Update url and add version 3.3.2
* Update url
2022-04-26 17:26:28 -07:00
haralmha
40ebeb2dc8
arrow: Add version 7.0.0 ( #29962 )
2022-04-26 16:57:56 -07:00
Lhxone
e5444b9a77
New package: Swan ( #30217 )
2022-04-26 16:32:19 -07:00
haralmha
89cc16a9cd
gnuplot: Add version 5.4.3 and add workaround for not found DSO ( #30163 )
2022-04-26 16:03:36 -07:00
