Todd Gamblin
ce8bd20944
Fix import error.
2015-12-18 22:23:51 -08:00
John Westlund
3e1ba6cc24
remove possible trailing slash in _sp_prefix or _sp_share_dir
2015-12-18 21:28:44 -08:00
Todd Gamblin
abd3d3946d
Format to 80 char width.
2015-12-18 19:23:45 -08:00
alalazo
f3837dd686
tau : removed direct otf2 support
2015-12-18 16:15:30 +01:00
alalazo
dfbf1b2205
Merge branch 'develop' of https://github.com/alalazo/spack into packages/tau
2015-12-18 13:00:43 +01:00
alalazo
8dc32aeedb
Improved tau build and added optional dependencies
2015-12-18 12:58:29 +01:00
Todd Gamblin
3198522a7f
Merge pull request #236 from nolta/cmake-enable-ssl
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cmake: enable ssl, for https downloads
2015-12-17 23:03:31 -08:00
Todd Gamblin
a173324069
Merge pull request #205 from trws/shell-arg-handling-fix
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fix for the shell arg handling issues
2015-12-17 23:01:46 -08:00
Todd Gamblin
ffd1d95806
Merge pull request #250 from davidbeckingsale/features/lmod
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Added Lmod package
2015-12-17 22:37:46 -08:00
David Beckingsale
f91e1ae83f
Added Lmod package
2015-12-17 15:26:47 -08:00
Todd Gamblin
4d982f5aca
Merge pull request #86 from jgalarowicz/develop
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Add support for Krell Institute related products.
2015-12-17 12:35:30 -08:00
Jim Galarowicz
c02cbaecd8
Change back the previous boost change and change the mrnet variant name to lwthreads.
2015-12-17 07:41:49 -08:00
Todd Gamblin
6b6a82c147
Merge pull request #246 from LLNL/features/245-pdb-debug
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added option to enable pdb debug
2015-12-16 16:08:09 -08:00
Gregory L. Lee
107c0dd1a8
added option to enable pdb debug
2015-12-16 15:54:15 -08:00
Todd Gamblin
85c02dbe7b
Merge pull request #167 from mathstuf/hdf5-fix-mpi-dependency
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Hdf5 fix mpi dependency
2015-12-16 12:03:22 -08:00
Gregory Lee
9cab88071b
Merge pull request #239 from LLNL/bugfix/238-db-specs-not-concrete
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Fix #238 : Database specs need to be concrete when read in as well.
2015-12-16 11:37:51 -08:00
Todd Gamblin
9ac4c730fb
Merge pull request #241 from epfl-scitas/packages/gnuplot
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gnuplot : added package
2015-12-16 11:37:26 -08:00
Todd Gamblin
09b6e8e804
Merge pull request #242 from epfl-scitas/packages/gsl
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gsl : added package
2015-12-16 11:36:09 -08:00
Todd Gamblin
5b665226a2
Merge pull request #243 from nolta/patch-2
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minor comment tweak in modules.py
2015-12-16 11:33:56 -08:00
Mike Nolta
82aa366adf
minor comment tweak in modules.py
2015-12-16 11:43:07 -05:00
alalazo
cc9266e56c
gsl : added package
2015-12-16 12:45:58 +01:00
Massimiliano Culpo
d5018e77a3
gnuplot : modifications to build on RHLE 6
2015-12-16 09:32:48 +01:00
Todd Gamblin
2f9ee88408
Fix #238 : Database specs need to be concrete when read in as well.
2015-12-15 17:15:37 -08:00
Mike Nolta
917fb328bb
cmake: enable ssl, for https downloads
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By default cmake builds its own curl, without SSL support. This
patch enables SSL when building cmake, fixing the following error:
error: downloading 'https://...' failed
status_code: 1
status_string: "Unsupported protocol"
log: Protocol "https" not supported or disabled in libcurl
2015-12-15 12:39:30 -05:00
alalazo
0a0cd4b9d3
gnuplot : added package
2015-12-15 16:29:36 +01:00
Todd Gamblin
dc3b54a681
Merge pull request #233 from LLNL/bugfix/206-value-error
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Fix #206 : need to make deps AND root concrete when read in.
2015-12-14 21:17:10 -08:00
Todd Gamblin
6e074a196a
Fix #206 : need to make deps AND root concrete when read in.
2015-12-14 21:06:32 -08:00
Todd Gamblin
3d39d035c1
Merge pull request #232 from LLNL/bugfix/package-cache-217
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Bugfix/package cache 217
2015-12-14 19:54:57 -08:00
Nicolas Richart
ed7db8e489
adding external dependencies + variants for mpi, shared and compression
2015-12-14 21:59:40 +01:00
Todd Gamblin
26b3d15ea0
Merge pull request #229 from epfl-scitas/packages/fftw
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fftw : added package
2015-12-14 10:12:22 -08:00
alalazo
1bfb16592b
fftw : added package
2015-12-14 16:31:02 +01:00
Jim Galarowicz
8df4fd9e94
Fix build of krell tools to use spack with minimal impact on rest of spack packages.
2015-12-13 17:13:34 -08:00
Jim Galarowicz
0fc83ba999
Fix merge conflict with papi package.
2015-12-11 17:23:54 -08:00
Todd Gamblin
afbd0e77d0
Make internal hash dep sort order match external one.
2015-12-11 16:47:34 -08:00
Todd Gamblin
3dd6cbc556
Fix #217 : update spec_dag test for new _cmp_key.
2015-12-11 13:07:20 -08:00
Todd Gamblin
6ee2eb21dd
Fix #217 : Use MUCH faster hashing, reduce number of DAG copies.
...
This changes the hash algorithm so that it does much less object
allocation and copying, and so that it is correct.
The old version of `_cmp_key()` would call `sorted_deps`, which would
call `flat_dependencies` to get a list of dependencies so that it
could sort them in alphabetical order. This isn't necessary in the
`_cmp_key()`, and in fact we want more DAG structure than that to be
included in the `_cmp_key()`.
The new version constructs a tuple without copying the Spec DAG, and
the tuple contains hashes of sub-DAGs that are computed recursively
in-place. This is way faster than the previous algorithm and reduces
the numebr of copies significantly. It is also a correct DAG hash.
Example timing and copy counts for the different hashing algorithms
we've tried:
Original (wrong) Spec hash:
```
106,170 copies
real 0m5.024s
user 0m4.949s
sys 0m0.104s
```
Spec hash using YAML `dag_hash()`:
```
3,794 copies
real 0m5.024s
user 0m4.949s
sys 0m0.104s
New no-copy, no-YAML hash:
```
3,594 copies
real 0m2.543s
user 0m2.435s
sys 0m0.104s
```
So now we have a hash that is correct AND faster.
The remaining ~3k copies happen mostly during concretization, and as
all packages are initially loaded. I believe this is because Spack
currently has to load all packages to figure out virtual dependency
information; it could also be becasue there ar a lot of lookups of
partial specs in concretize. I can investigate this further.
2015-12-11 12:40:27 -08:00
Todd Gamblin
7526a89463
Fix #217 : Make package cache use DAG hash instead of sorted deps.
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- Gets rid of last vestige of old-style specs.
- Uses new hashing for lookup
2015-12-11 02:17:17 -08:00
Tom Scogland
281a869ef6
fix path resolution for mirror packages, especially with dependency fetching
2015-12-10 09:24:01 -08:00
Ben Boeckel
6f978af77b
hdf5: update dependents to declare MPI support
2015-12-10 11:53:40 -05:00
Ben Boeckel
79a641ccf1
paraview: update hdf5 comment
2015-12-10 11:51:54 -05:00
Ben Boeckel
c5b7eba457
hdf5: make mpi support optional
2015-12-10 11:51:54 -05:00
Tom Scogland
786f4cd2c2
add dependency fetching to mirror creation
2015-12-10 08:32:51 -08:00
Tom Scogland
25f2b01a3c
fetch: add options to fetch missing or all deps
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Small additions to fetch to make it easier to fetch all files necessary for a
build on a system without network connectivity.
2015-12-10 07:27:06 -08:00
Gregory L. Lee
3163d016db
install python files to libxml2 prefix instead of python prefix and ignore non-python files when activating
2015-12-09 14:10:05 -08:00
Nicolas Richart
0daa08416a
corrected filter_compilers + added it for mvapich2
2015-12-09 20:00:54 +01:00
Todd Gamblin
f6eb000381
Merge pull request #225 from epfl-scitas/packages/git
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Adding https support in git even if system lib are missing
2015-12-09 10:59:47 -08:00
alalazo
20e67bc5e6
clang : solve the issue with missing default include paths for OpenMP and libc++
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resource : support for finer grained linking of resources
2015-12-09 17:15:26 +01:00
Nicolas Richart
31863c68d8
Adding curl and expat support to git for https repos
2015-12-09 11:00:33 +01:00
Todd Gamblin
e46af913be
Merge pull request #148 from PaulDapolito/glib-dep
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added zlib dependency to glib package specification
2015-12-09 01:44:00 -08:00
Todd Gamblin
8ebac18f50
Merge pull request #224 from epfl-scitas/packages/gdb
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gdb : added package
2015-12-09 01:35:04 -08:00
