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1848 commits

Author SHA1 Message Date
Tom Scogland
73620fe868 avoid specifying --delim unless required 
This increases portability of generated module files to versions of
environment_modules hearkening back to just after the turn of the
millennium.
 2016-08-24 11:00:16 -07:00
Nicolas Richart
37faa41b6f stripping the links to remove spaces and '\n' 2016-08-15 21:13:25 +02:00
Todd Gamblin
1e673bfa42 Don't assume spack is in the path when buildign docs. 2016-08-15 10:49:09 -07:00
Adam J. Stewart
c815aed207 Update documentation for spack md5 2016-08-12 10:51:56 -05:00
becker33
ec7f58bf96 Merge pull request #1493 from xjrc/bugfix/nonbool-variants 
Bug Fix : Allow Packages to Have Variants w/ Non-Bool, Non-String Defaults
 2016-08-11 11:33:54 -07:00
Matt Belhorn
568305ddff Corrects Cray compiler name and adds missing version flag. 2016-08-11 13:56:21 -04:00
Todd Gamblin
867121ca68 Move jsonschema files out of config.py to their own package. 2016-08-10 16:33:38 -07:00
Todd Gamblin
bf1072c902 Make Spack core PEP8 compliant. 2016-08-10 16:33:37 -07:00
Todd Gamblin
e7f4fd404d Fix superclass constructor for SpackNamespace objects. 2016-08-10 15:54:13 -07:00
Joseph Ciurej
aa860bf4df Fixed a bug that was making packages with non-bool default variants to crash. 2016-08-10 11:54:33 -07:00
George Hartzell
4bca1c5440 Fix typo 'flexbile' -> 'flexible' 2016-08-09 15:13:08 -07:00
Todd Gamblin
9d4a36a62f Properly re-raise exceptions from lock context handler. 2016-08-09 02:25:09 -07:00
Todd Gamblin
0c75c13cc0 Flake8 fixes 2016-08-09 02:25:07 -07:00
Todd Gamblin
102ac7bcf1 Move provider cache to home directory and refactor Transactions 
Major stuff:

- Created a FileCache for managing user cache files in Spack.  Currently just
  handles virtuals.

- Moved virtual cache from the repository to the home directory so that users do
  not need write access to Spack repositories to use them.

- Refactored `Transaction` class in `database.py` -- moved it to
  `LockTransaction` in `lock.py` and made it reusable by other classes.

Other additions:

- Added tests for file cache and transactions.

- Added a few more tests for database

- Fixed bug in DB where writes could happen even if exceptions were raised
  during a transaction.

- `spack uninstall` now attempts to repair the database when it discovers that a
  prefix doesn't exist but a DB record does.
 2016-08-09 00:24:54 -07:00
Todd Gamblin
2042e9a6d8 Fix bugs with sparse spec printing. 
- Make namespace, arch, and dependnecies show up in spec yaml
  only if they're set.

- Lost some of this functionality with deptypes
 2016-08-08 21:04:23 -07:00
Todd Gamblin
1339714eec Restore text output in verbose mode. 2016-08-08 21:04:23 -07:00
Todd Gamblin
5d690c9270 Make compiler command test last until caching is fixed. 
- global compiler cache breaks tests that come after this one.
 2016-08-08 21:04:23 -07:00
Todd Gamblin
e5743db9b9 Fix issues with import order in tests. 
- modules weren't set properly as attributes in parent modules
 2016-08-08 21:04:23 -07:00
Todd Gamblin
d195576fba WIP 2016-08-08 21:04:23 -07:00
Todd Gamblin
5e5024342f Fix iterator invalidation issues. 2016-08-08 21:04:23 -07:00
Todd Gamblin
4de45c2684 fix scoping issue. 2016-08-08 21:04:23 -07:00
Todd Gamblin
ce6ac93abe rename virtual module to provider_index 2016-08-08 21:04:23 -07:00
Todd Gamblin
1f5a21decf Fix namespace support in Repo.get_pkg_class() 2016-08-08 21:04:23 -07:00
Todd Gamblin
ab049eca41 Faster key in FlagMap._cmp_key 2016-08-08 21:04:23 -07:00
Todd Gamblin
37fc258313 Remove vestigial methods from Package. 2016-08-08 21:04:23 -07:00
Todd Gamblin
faa0a0e4c3 Add a ProviderIndex cache. 
- Spack will check if the index needs updating, and will only parse
  all package files if it does.

- Spack tries to parse as few package files as necessary.
 2016-08-08 21:04:23 -07:00
Todd Gamblin
cf2f902b82 Make ProviderIndexes mergeable, so we can cache them per-repo. 2016-08-08 21:04:23 -07:00
Todd Gamblin
bf028990e7 Make ProviderIndex yaml-izable. 
- allow a provider index to be stored and re-read.
 2016-08-08 21:04:23 -07:00
Todd Gamblin
025609c63f More compact YAML formatting for abstract specs. 
- Don't add empty/absent fields to Spec YAML when they're not there.
 2016-08-08 21:04:23 -07:00
Todd Gamblin
7aaad89ba9 Lazily evaluate all_package_names in repository.py 
- Don't need to list all packages unless we have to.

- Only use the list of all packages for existence checks if we have
  generated it for some other purpose.
 2016-08-08 21:04:23 -07:00
Adam J. Stewart
5d48c108a3 Only strip newline chars, not spaces 2016-08-08 15:02:05 -05:00
Glenn Johnson
20221ee3aa Catch error for version in VCS 
This PR will catch the error where the url can not be determined from a
VCS URL, such as git. It will print a message to the console and move on
because it should not be a fatal error at this point in the process.

This should fix #1459.
 2016-08-05 11:16:43 -05:00
Todd Gamblin
6ab78eb88e sbang filtering now works on non-writable files. (#1445) 
- sbang now changes mode to writable and restores mode if a file is not
  writable.
 2016-08-04 10:46:45 -07:00
becker33
369b2ef01f Merge pull request #1330 from suraia/fix-ascii-graph 
Fix graph command with ASCII output
 2016-08-04 09:37:24 -07:00
Torbjörn Lönnemark
61b3ecb6d2 Fix flake8 issues 2016-08-04 16:28:14 +02:00
Torbjörn Lönnemark
a591e183bc Fix incorrect indentation 2016-08-04 16:09:49 +02:00
Michael Kuhn
2bd1a51193 flake8 fixes 2016-08-04 13:07:33 +02:00
Michael Kuhn
1578a95982 Fix tests. 2016-08-04 13:07:33 +02:00
Michael Kuhn
7affaca321 Fix graph command with ASCII output. 2016-08-04 13:07:33 +02:00
James Riley Wynne III
f0609699ba Added parens to %'s arguments. Fixes #1432 2016-08-03 17:16:04 -04:00
Kelly (KT) Thompson
46e9d85283 Cray: Fix a typo that could cause an infinite recursion when calling /env/cc. 
fixes #1428
 2016-08-03 14:15:44 -06:00
becker33
7ae163d436 Merge pull request #1361 from epfl-scitas/features/module_token_expansion_in_environment 
module : token expansion in environment
 2016-08-03 09:49:28 -07:00
Adam J. Stewart
941acef009 spack create should use setup_py() instead of python() 2016-08-02 12:20:28 -05:00
becker33
326b9838ed Merge pull request #1423 from glennpj/fix_url 
Move archive_version setting to if block
 2016-08-02 10:05:25 -07:00
Glenn Johnson
2929fb0a4d Move archive_version setting to if block 
The archive_version variable should only get set if versions will be
checked and that is only if there is a list_url in the package file. For
VCS repos setting the variable triggers an error from web.py as it
parses the default_fetcher object.

This should fix #1422.
 2016-08-02 11:54:09 -05:00
becker33
21158195fb Merge pull request #1354 from paulhopkins/bugfix/preferred_variants_do_not_recognise_-variant 
Bugfix/preferred variants do not recognise  -variant
 2016-08-02 09:15:06 -07:00
Gregory Becker
679ceabf36 fixed flake8 errors 2016-08-01 17:22:13 -07:00
Gregory Becker
31042e8ed1 further improved error message 2016-08-01 17:16:06 -07:00
Gregory Becker
2705f2c0e3 changed error raised in concretize compiler to provide better error message 2016-08-01 17:11:10 -07:00
becker33
c678a9e3da Merge pull request #1417 from LLNL/features/combined-cray-platform-cleanup 
Removed vestigial cray_xc platform in favor of combined cray platform
 2016-08-01 16:26:20 -07:00