Commit graph

20556 commits

Author SHA1 Message Date
Robert Mijakovic
50f5ec7abf
valgrind: add version 3.17.0 (#22752) 2021-04-06 13:57:48 -07:00
iarspider
0166f7db08
New package: Oracle instant client (#22797) 2021-04-06 13:56:33 -07:00
darmac
23422dcc59
tcpdump: add version 4.99.0 (#22803) 2021-04-06 13:33:43 -07:00
Xavier Delaruelle
9505af42ff
environment-modules: add version 4.7.1 (#22811) 2021-04-06 20:23:01 +00:00
Desmond Orton
838bba70c6
salmon: New patch (#22686) 2021-04-06 12:37:32 -07:00
Glenn Johnson
442241d477
new package: py-python-box (#22814) 2021-04-06 14:36:53 -05:00
Harmen Stoppels
a989521052
Squashfuse: Enable or disable static and shared libs, and allow min size builds too, useful for appimages (#22669)
* Enable or disable static and shared libs, and allow min size builds too, useful for appimages

* Fix master version
2021-04-06 14:00:32 -05:00
Harmen Stoppels
bbc666a1d2
meson: added variants, changed defaults for the build system (#22715)
- Use debugoptimized as default build type, just like RelWithDebInfo for cmake
- Do not strip by default, and add a default_library variant which conveniently support both shared and static
2021-04-06 17:57:31 +02:00
Jen Herting
a4c3bc9893
New package: py-ilmbase (#22783)
* [py-ilmbase] created template

* [py-ilmbase] added dependencies and configuration options as necessary

* [py-ilmbase] added homepage and description removed fixmes

* [py-ilmbase] shortened lines for flake8
2021-04-06 09:55:40 -05:00
Robert Mijakovic
b6668a1146
paraview: adds new cuda target, ampere (#22750)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-06 16:54:35 +02:00
Seth R. Johnson
1ed44f20f2
m4: force path where to look for autoconf (#22765)
Uses the M4 environment variable
2021-04-06 10:21:38 +00:00
Michael Kuhn
85cdb3d250
xfsprogs: add 5.11.0 and fix build with newer versions of gcc (#22665)
xfsdump depends on an older version of xfsprogs that does not build with
recent versions of gcc.
2021-04-06 11:21:48 +02:00
ravil-mobile
8b4cf24ba7
hipsycl: add v0.9.1 which partially implements SYCL 2020 standard (#22770)
Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
2021-04-06 11:21:05 +02:00
Gregory Lee
5b1fa20f87
stat: deprecate versions prior to 4.0 (#22650) 2021-04-06 11:16:54 +02:00
Sergey Kosukhin
47c13bc6ca
cdo: help libtool to find the correct paths to libraries (#22670)
- Add a maintainer
- Help libtool to find the correct paths to libraries
- Handle externals from system directories
- Enable eccodes for older versions
2021-04-06 11:15:29 +02:00
Gilles Grospellier
fbed5d1eb5
dotnet-core-sdk: add v5.0.4 and v3.1.13. (#22217) 2021-04-06 03:06:50 -06:00
Glenn Johnson
a586b8df20
itk: add v5.1.2 (#22655) 2021-04-06 11:03:53 +02:00
Harmen Stoppels
d2bf74242e
libtree: add v1.2.1 (#22795) 2021-04-06 09:01:08 +00:00
Thomas Gruber
cac8646e1c
likwid: add v5.1.1 (#22672) 2021-04-06 10:59:38 +02:00
Robert Mijakovic
f9837d8c66
qwt: add v6.1.6 (#22713)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-06 10:45:09 +02:00
Robert Mijakovic
1424dc6147
rdma-core: add v34.0 (#22710)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-06 10:44:46 +02:00
Axel Huebl
710d096b43
Update mailmap (#22739) 2021-04-06 10:32:35 +02:00
darmac
239be21391
libpcap: add v1.10.0, v1.9.1 (#22741) 2021-04-06 10:31:15 +02:00
darmac
4668f34682
capnproto: add v0.8.0 (#22743) 2021-04-06 10:23:49 +02:00
Harmen Stoppels
0fcda35a71
spack location: fix usage without args (#22755) 2021-04-06 08:17:58 +00:00
Robert Mijakovic
8c5f4c9c94
spark: add v3.1.1, v3.0.2, v3.0.2, v2.4.7 (#22753)
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-04-06 10:14:28 +02:00
Tiziano Müller
d0a2e354bb
anaconda3: add v2020.11 (#22576) 2021-04-06 10:02:57 +02:00
Jen Herting
91bd16a850
r-assertive-base: new package (#22780)
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-06 09:46:06 +02:00
Amiya Maji
7e6386803e
fltk: add explicit dependency on gl and a variant to activate it (#22761)
* The fltk package can build libraries with opengl support. By default, the configure script looks for opengl headers in the sytem include paths. If 'devel' packages have not been installed on the system it omits the 'ftlk_gl.so' library. This can break packages like 'octave' which expects 'fltk' to have opengl support and looks for the library 'fltk_gl'.

Make opengl support explicit in fltk by adding a dependency on 'gl' and adding a new variant of the same name 'gl' (default On).

With these modifications 'fltk_gl' and 'octave' build successfully on CentOS8.

The default behavior is to always enable opengl.

https://www.fltk.org/doc-1.3/intro.html
2021-04-06 09:45:00 +02:00
Greg Sjaardema
8dab9f0a81
seacas: add v2021-04-05 (#22784) 2021-04-06 09:41:11 +02:00
Andrew W Elble
a57f56c5b9
openmpi: allow to build with ^slurm ~pmi for >3.0.0 with PMIx (#22086) 2021-04-06 09:40:33 +02:00
Brian Van Essen
023524365c
hydrogen, lbann: forward the CXXFLAGS to the HIP_HIPCC_FLAGS variable. (#22744) 2021-04-06 09:38:37 +02:00
Harmen Stoppels
802f4d9ffa
zstd: add v1.4.9, switch to cmake to configure more easily (#22668)
Also:
- Add variants to control the build
- Add a maintainer
- Add master version
2021-04-06 09:37:08 +02:00
Robert Mijakovic
fc5a50aa83
hdf5: patch for BOZ literal constant error when compiled with GCC 10. (#22509) 2021-04-06 01:13:11 -06:00
Seth R. Johnson
26c7f02873
doxygen: add version restriction (#22773)
This triggered on my mac because clingo seems to have bootstrapped a
very old version distributed by apple.
2021-04-06 09:09:01 +02:00
Andrew W Elble
e5c7723276
stress-ng: new package (#22777) 2021-04-06 09:07:56 +02:00
Harmen Stoppels
eb6f4c740b
Add patch for latest hwloc@:1 to locate ncurses (#22776)
* Add patch for latest hwloc@:1 to locate ncurses

This way we don't have to depend on ncurses~termlib, which may run into
issues when another package explicitly depends on ncurses+termlib

* Move termcap to the back, cause it's a system symlink on macos and isn't set by spack
2021-04-06 09:00:22 +02:00
Andrew W Elble
6e48e29c75
gpu-burn: add v1.1 and "master" (#22778) 2021-04-06 08:57:03 +02:00
Desmond Orton
1c0230f7d0
rnaquast: add new package (#22648) 2021-04-06 08:49:58 +02:00
Glenn Johnson
65b03a9f03
trf: add v4.09.1 and other updates (#22782)
- add new version, 4.09.1
- use github url
- convert to autotools package
- deprecate version 4.07b: This version requires manual download and is
  a binary only installation.
2021-04-06 08:48:04 +02:00
Glenn Johnson
6df1b509fa
repeatmasker: update and fix package (#22785)
- version 4.0.7 was not building
- version 4.0.9 was not setting search correctly due to an extra "return"
  in config
- added version 4.1.2-p1
- new version needs py-h5py
- new version does not need utf8 patch
- url format changed
2021-04-06 08:35:51 +02:00
Glenn Johnson
a4f19853b8
hmmer: add v3.3.2 (#22787) 2021-04-06 08:26:22 +02:00
Andrew W Elble
b924440f79
exabayes: add v1.5.1 (#22789) 2021-04-06 08:11:48 +02:00
Adam J. Stewart
3336fff229
Remove erroneous warnings about quotes for from_source_file (#22767) 2021-04-06 07:13:54 +02:00
Axel Huebl
c1cf643780
libfabric: add v1.12.1 (#22790)
Add latest patch release to fix build issues with unconditional
usage of `infiniband/ib.h`
2021-04-06 07:06:01 +02:00
Valentin Volkl
1908e6834d
qt: backport build issue fix on 5.14 due to isystem (#22772) 2021-04-04 09:55:42 -04:00
Cameron Stanavige
bfb3b55414
rankstr: add v0.0.3 (#22763) 2021-04-03 21:11:37 +02:00
Jen Herting
3a36ca4b36
New package: r-anytime (#22624)
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02 21:09:50 -05:00
Jen Herting
b51363e0ac
New package: r-pheatmap (#22617)
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02 20:57:09 -05:00
Jen Herting
0d4e0b8198
New package: r-amelia (#22623)
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-02 20:54:29 -05:00