* Initial attempt at flann packaging.
Python2 somehow works. Python3 does not. Still debugging their
obscure setup.py configuration.
* Flann good enough. Python3 broken but close.
Flake8 checks in place. Unsure about CMAKE_BUILD_TYPE and default
spack behavior.
* spack uses RelWithDebInfo as default build type.
* builds py2/3, but direct site-packages install
* prefix working, empty python install dir
* flann package +python installs correctly
* str format {0} instead of {}
* potential doctest fix
* consistency of build env with PythonPackage
* fix python again, test deptype todo, build type
* potentially enable matlab, untested
* highfive: New package; this is a C++ wrapper for the HDF5 library
The C++ wrapper that is shipped with the HDF5 library has several shortcomings. The highfive library seems to avoid these.
* highfive: Make MPI variant default to true
* enable cuda support for suite-sparse
* do not use spec.satisfies
* cuda restructure, give clearer comment of why
* str format compatibility
* flake8 checks
* adding 0.5.1 and variant for uint8 bit stream word type
* Revisions as per davydden
* fixing style (flake8) issues
* - switched to derive from MakefilePackage
- fixed typo in variant check
- Confirmed installs correctly with bswtuint8 variant
* added build method; changed zfp_incdir to incdir
* * Adding uber fastmath package to support 'spack install fastmath'
* Adding dims variant boxlib to control compile-time spatial dimension count
* Explicitly disabling many parts of moab to get lib to build. Don't need tools yet.
* Add logic to spack/setup-env to not refer to $SYS_TYPE if its not defined.
* adding mesquite package
* * Added Chombo (still working on Fortran name mangling)
* Made mesquite depend on mpi
* Fixed use of boxlib's dims numerical variant
* adding PUMI
* flake8 compliance
* adding phasta
* fixing flake8 issues
* undue $SYS_TYPE protection change
* fixing install step for fastmath uber package; resolve issues requested by adamjstewart in PR
* revisions as per adamjstewart
* re-enabling trilinos and phasta dependencies
* all changes requested modulu values= and assert statement
* fixing cmake_args usage in pumi; fixing lib installs for chombo
* first pass at numerical variant
* fixing dims variant as per @adamjstewart
* fixing func/var name collision
* fixing means of disabling -Werror
* fix name collision for cmake_args var/func
* fixing chombo homepage/url; make FASTMath use chombo#3.2; remove extraneous comment about boxlib dim
* remove dummy fastmath package; switch to @BarrySmith soln for install of dummy bundle
* fix flake8 import os issue
* remove extraneous comment
* adding url for fastmath scidac site
* final fixes as per @adamjstewart
* adding 1 dims option for boxlib
* switching make(all) to gmake(all)
Added DFLAGS to the `make.inc` file being written.
These macros are also added to the language specific variables
like CFLAGS, CXXFLAGS and FCFLAGS. Changed `spec.satisfies('foo')`
with `'foo' in spec` in `intel-mkl`, see #4135. Added a basic
build interface to `intel-mpi`.
* Add GCC 7
* Allow users to build subset of GCC compilers with multi-value variant.
* Add comment explaining what 'all' actually means
* More specific golang support
* Only require Zip when building Java
* Comment out provide directives that don't currently work
* Add Ada support
* Use conflicts directive
* Fix joining of languages
* Need special flag to build jit
* Explicitly declare GNAT download extension
* Import tty, update lib64 to lib
* BRIG and Go are not supported on macOS
* Simplify formatting and imports
* JIT patch required for newer versions as well
* Updating bamtools to include a dependency for zlib.
In a standard compile, bamtools will fail if zlib headers are not installed on the target machine. In order to maintain compatibility with all systems -- and since zlib is included already as a dependency for cmake -- this patch adds zlib as a link dependency for the bamtools package.
* Modified cmake rpath include.
Bamtools has a non-standard library location, so we need to append $prefix/lib/bamtools to the rpath. Not sure there's a better way to do this...
* Fixing syntax error in package.py
Fixed a non-terminated parenthesis on line 46.
* Updated bamtools to be a CMakePackage
Removed extraneous code, and altered the package to extend cmake_args
including the non-standard library location.
* UpRemoving cmake dependency and removing blank line from end of file
* Updates to cmake_args.
Removed the duplicate definition of std_cmake_args in favor of simply overriding the CMAKE_INSTALL_RPATH variable that is provided. This should allow the package to be linked correctly to itself.
python+tk will not build because it depends (indirectly) on python~tk
via libxcb. There are efforts to allow multiple instances of a package
to concretize together but they are ongoing so in the meantime this
comments out the dependencies and adds TODOs
* SV variants are evaluated correctly in `when=` statements fixes#4113
The problem here was tricky:
```python
spec.satisfies(other)
```
changes already the MV variants in others into SV variants (where
necessary) if spec is concrete. If it is not concrete it does
nothing because we may be acting at a pure syntactical level.
When evaluating a `when=` keyword spec is for sure not concrete
as it is in the middle of the concretization process. In this case we
have to trigger manually the substitution in other to not end up
comparing a MV variant "foo=bar" to a SV variant "foo=bar" and having
False in return. Which is wrong.
* sv variants: improved error message for typos in "when=" statements
