Alec Scott
0f27188383
millepede: add v04-13-03 ( #38141 )
2023-06-16 11:12:01 -07:00
Greg Becker
99f3b9f064
show external status as [e] ( #33792 )
2023-06-16 18:22:28 +02:00
Axel Huebl
d1bc4c4ef1
WarpX 23.06 ( #38303 )
...
* WarpX 23.06
Update WarpX and related Python packages to the lastest releases.
WarpX 23.06 introduces multi-dimension support in a single package,
which will ease deployment in E4S et al. that can ship now a single,
full-feature module/package that is NOT incompatible with itself
anymore.
* e4s ci stacks: multiple specs for each dim variant no longer required
* [@spackbot] updating style on behalf of ax3l
* WarpX: Update CMake CLI and Test/Check
* Add Missing `build-directory`
* [@spackbot] updating style on behalf of ax3l
* Remove `build_directory` again
---------
Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
Co-authored-by: ax3l <ax3l@users.noreply.github.com>
2023-06-16 06:47:59 -07:00
Gurkirat Singh
69a5c55702
docs: add quotes around some values in a YAML example ( #38412 )
2023-06-16 10:29:09 +02:00
Larry Knox
2972d5847c
Remove experimental hdf5 versions 1.13.x and add hdf5 version 1.10.10. ( #38013 )
...
* Remove experimental hdf5 versions 1.13.x.
Upgrade to 1.14 or remove dependencies on hdf5 1.13.x.
* Revert change to netcdf-c/package.py.
2023-06-15 22:41:39 -05:00
George Young
1577eb9602
star: add 2.7.10 ( #38197 )
...
* star: add 2.7.10
* star: fix building for non-avx2 arch processors
* convert to MakefilePackage, second take at fixing for aarch64
* style
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-15 12:53:32 -07:00
George Young
2f97c6ead2
perl-gd: update to 2.77, update urls ( #38413 )
...
* perl-gd: update to 2.77, update urls
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-15 12:39:57 -07:00
markus-ferrell
1df4afb53f
Enable build system guess tests on windows ( #36971 )
2023-06-15 11:40:09 -07:00
Adam J. Stewart
4991f0e484
MXNet: fix flag versions ( #38402 )
2023-06-15 11:34:21 -07:00
markus-ferrell
09fd7d68eb
Windows testing: enable graph, mark, and info cmd tests ( #36977 )
2023-06-15 11:28:52 -07:00
Jacob King
2ace8a55c1
Create package.py file for NIMROD abstract accelerated infrastructure. ( #38405 )
...
Co-authored-by: jacobrking <jacobrking@users.noreply.github.com>
2023-06-15 11:24:55 -07:00
Manuela Kuhn
861acb9467
py-nibabel: add 5.1.0 ( #38379 )
2023-06-15 13:14:26 -05:00
Thomas Madlener
eea743de46
podio: Add py-tabulate as new run and test dependency ( #38409 )
2023-06-15 10:56:00 -07:00
George Young
e2b6e5a7ec
py-numba: add 0.57.0, update dependency ranges ( #38390 )
...
* py-numba: add 0.57.0, update dependency ranges
* Update var/spack/repos/builtin/packages/py-numba/package.py
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
* Update var/spack/repos/builtin/packages/py-numba/package.py
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
* Update package.py
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-06-15 12:39:12 -05:00
Manuela Kuhn
2f2dc3695c
py-datalad: add 0.18.4 ( #37936 )
2023-06-15 12:22:45 -05:00
Tamara Dahlgren
6eb5e57199
tests/py-horovod: convert to new stand-alone test process ( #38366 )
2023-06-15 12:17:09 -05:00
Tamara Dahlgren
9a047eb95f
tests/py-libensemble: convert to new stand-alone test process ( #38344 )
2023-06-15 12:09:57 -05:00
Tamara Dahlgren
ef42fd7a2f
tests/py-eccodes: convert to new stand-alone test process ( #38346 )
2023-06-15 11:58:00 -05:00
Manuela Kuhn
e642c2ea28
py-neurora: add 1.1.6.10 ( #38378 )
2023-06-15 11:14:28 -05:00
Massimiliano Culpo
f27d012e0c
Add virtual information on DAG edges ( #34821 )
...
* DependencySpec: add virtuals attribute on edges
This works for both the new and the old concretizer. Also,
added type hints to involved functions.
* Improve virtual reconstruction from old format
* Reconstruct virtuals when reading from Cray manifest
* Reconstruct virtual information on test dependencies
2023-06-15 07:16:54 -07:00
Tamara Dahlgren
c638311796
test/dust: convert to new stand-alone test process ( #38367 )
2023-06-14 20:27:35 -07:00
Manuela Kuhn
2a02bea405
py-nbclient: add 0.8.0 ( #38325 )
2023-06-14 17:31:03 -05:00
Manuela Kuhn
219b42d991
py-nbconvert: add 7.4.0 ( #38326 )
...
* py-nbconvert: add 7.4.0
* Move historical dependencies after variant
2023-06-14 17:28:30 -05:00
Manuela Kuhn
c290ec1f62
py-docutils: re-add python@3.7 ( #38336 )
2023-06-14 17:19:27 -05:00
Satish Balay
e7ede86733
magma@master: add python dependency ( #38341 )
2023-06-14 17:15:40 -05:00
Thomas Madlener
e3e7609af4
edm4hep: Add version 0.9 ( #38205 )
2023-06-14 16:53:31 -04:00
Dennis Klein
49d7ebec36
fairmq: Add v1.6.0 ( #38392 )
2023-06-14 16:47:59 -04:00
Alec Scott
7c3d82d819
ltp: add v20230516 ( #38138 )
2023-06-14 16:27:27 -04:00
George Young
1c0fbec9ce
subread: add 2.0.6, update download paths ( #38200 )
...
* subread: add 2.0.6, update download paths
* Update var/spack/repos/builtin/packages/subread/package.py
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-06-14 13:20:29 -07:00
kjrstory
ca4d60ae25
openradioss-starter,engine: new package ( #38291 )
...
* openradioss-starter,engine: new package
* openradioss-engine: change version name develop to main
* openradioss-starter: change version name develop to main
2023-06-14 13:04:03 -07:00
Alec Scott
dc571e20d6
freeipmi: add v1.6.9 ( #38349 )
2023-06-14 13:02:02 -07:00
Kim Liegeois
1485275d0c
Add Binder spackage ( #38371 )
...
* Add Binder spackage
* Format binder recipe
* Format binder recipe
2023-06-14 12:41:35 -07:00
pabloaledo
1afbf72037
add bioconductor-ebseq ( #38380 )
...
* add buiconductor-ebseq
Signed-off-by: Pablo <pablo.aledo@seqera.io>
---------
Signed-off-by: Pablo <pablo.aledo@seqera.io>
2023-06-14 12:40:57 -07:00
Rémi Lacroix
407fd80f95
ctffind: Add a patch to fix incorrect return types. ( #38085 )
...
Prevent the code from crashing (cf. https://grigoriefflab.umassmed.edu/comment/1696#comment-1696 ).
2023-06-14 12:29:41 -07:00
Tamara Dahlgren
62525d9076
dsqss: convert to new stand-alone test process ( #38372 )
2023-06-14 11:54:47 -07:00
Alec Scott
c2371263d1
lastz: add v1.04.22 ( #38388 )
...
* lastz: add v1.04.22
* Fix formatting of versions to include extra space
2023-06-14 10:05:45 -07:00
Alec Scott
5a870182ec
ipopt: add v3.14.9 ( #38387 )
2023-06-14 10:04:54 -07:00
Alec Scott
e33ad83256
imath: add v3.1.9 ( #38386 )
2023-06-14 10:03:41 -07:00
Alec Scott
0352a1df5d
imagemagick: add v7.1.1-11 ( #38385 )
2023-06-14 10:02:36 -07:00
Alec Scott
ade44bce62
cgal: add v5.5.2 ( #38384 )
2023-06-14 10:01:33 -07:00
Mark W. Krentel
ddb29ebc34
intel-xed: add version 2023.06.07 ( #38373 )
...
Add version 2023.06.07, update python to 3.7.
2023-06-14 09:46:53 -07:00
Mark W. Krentel
19a62630e5
hpcviewer: add version 2023.05 ( #38374 )
2023-06-14 09:45:21 -07:00
Alec Scott
5626802aa0
cloc: add v1.96.1 ( #38348 )
2023-06-14 12:28:08 -04:00
kwryankrattiger
f68063afbc
DaV: Drop propagation of HDF5 to darshan ( #38361 )
...
Darshan Runtime does not properly link symols for HDF5 when using shared
libraries.
2023-06-14 11:02:18 -05:00
Alec Scott
8103d019d6
hbase: add v2.5.4 ( #38353 )
2023-06-14 11:47:53 -04:00
Alec Scott
ce89cdd9d7
fzf: add v0.41.1 ( #38351 )
2023-06-14 11:38:02 -04:00
Alec Scott
20d9b356f0
hashcat: add v6.2.6 ( #38352 )
2023-06-14 11:32:56 -04:00
Alec Scott
3401438a3a
hyperfine: add v1.17.0 ( #38354 )
2023-06-14 11:23:20 -04:00
Alec Scott
dcf1999d22
ftxui: add v4.1.1 ( #38350 )
2023-06-14 11:16:13 -04:00
snehring
9e3c3ae298
Repeatmodeler 2.0.4 ( #38337 )
...
* perl-devel-size: adding new package
* repeatmodeler: adding new version 2.0.4
* perl-devel-size: adding proper description
2023-06-14 11:10:50 -04:00
