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Author SHA1 Message Date
Robert Underwood
6f2f02366a
sz: version bump, cmake bug-fix, add maintainer (#18238) 
+ Added version 2.1.9
+ Previously the SZ package incorrectly depended on CMake without a
  version dependancy, but actually version 3.13 or newer is required
+ Added myself as a maintainer for the SZ spack package
 2020-08-24 19:05:08 -05:00
Benjamin Tovar
d6ca3be63a
Update to CCTools 7.1.7 (#18241) 
This is a bug release with some new features and bug fixes. Among them:

[Batch] Set number of MPI processes for SLURM. (Ben Tovar)
[General] Use the right signature when overriding gettimeofday. (Tim
Shaffer)
[Resource Monitor] Add context-switch count to final summary. (Ben
Tovar)
[Resource Monitor] Fix kbps to Mbps typo in final summary. (Ben Tovar)
[WorkQueue] Update example apps to python3. (Douglas Thain)
 2020-08-24 19:04:08 -05:00
Axel Huebl
a483b0b9dd
CMake: 3.18.2 (#18244) 
Adds the latest CMake release, which fixes a Spectrum-MPI + CUDA<10.2
issue, among others. Relevant for Summit.
 2020-08-24 19:03:11 -05:00
Adam J. Stewart
5ef7d5e792
CUDA: add v10.1.243 for ppc64le (#18237) 
Closes #18174 

@smarocchi @ax3l @svenevs 

The error message in #18174 isn't great, but I'm hoping that #18127 will improve that.
 2020-08-24 14:50:10 -07:00
Daryl W. Grunau
f5102cd582
call the universal 'mpifc' instead of hardcode 'mpif90' (#18162) 
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
 2020-08-24 15:44:20 -05:00
Harmen Stoppels
17f7d9f44c
openmpi: fix concretization (#18233) 2020-08-24 19:05:39 +02:00
Erik Schnetter
53cfca1f59
simulatioion: Declare dependency on asdf-cxx (#18018) 
* simulationio: Declare dependency on asdf-cxx

* Rename "develop" to master"; add descriptions to variants

* Add maintainer
 2020-08-24 11:25:43 -05:00
David Gardner
3c866294e1
add github url as backup (#18223) 2020-08-23 16:43:57 -05:00
t-nojiri
b721a2e54b
soapdenovo-trans: build on aarch64 (#18187) 
* samtools: Add version 0.1.8 for OSS soapdenovo-trans.

* Add depend on zlib and samtools to build on aarch64.

* soapdenovo-trans: Change the condition of depend on zlib and samtools.
 2020-08-22 22:11:19 -05:00
David Gardner
a6ca236c26
add tcl 6.8.10 (#18221) 2020-08-22 22:02:57 -05:00
Sergey Kosukhin
b5e78bce06
OpenMPI: sanitize dependent build environment. (#15360) 2020-08-22 22:01:41 -05:00
Sergey Kosukhin
9fdb945383
NetCDF: fix constraints. (#16719) 2020-08-22 16:06:17 -05:00
Teodor Nikolov
dc5176fbae
[hpx] Two new variants for upcoming v1.5, stable and master (#18022) 
* New package: cxxopts

* Use +unicode instead of unicode=True

- Make the unicode option more explicit

* Add two new variants to spack for upcoming 1.5, stable and develop

* Add as maintainer

* Add depends_on on clauses

* Remove unrelated change
 2020-08-22 16:00:11 -05:00
Carson Woods
c743d219aa
qthreads: add additional configuration options (#15833) 
* Add new config options for qthreads

* Fix syntax error and add option for specifying stack size

* Fix flake8 issues

* Add input validation for the stack size variant and add explicit enable for spawn cache

* Fix flake8 issues with input validation code
 2020-08-22 15:58:41 -05:00
Jianwen
e26e532eb3
vifi: a new package. [WIP] (#14287) 
* vifi: a new package.

* Fix url.

* Add dependencies.
 2020-08-22 15:23:04 -05:00
noguchi-k
15facf2171
ibm-java: add conflicts for aarch64 (#13728) 2020-08-22 15:22:50 -05:00
Ruben Di Battista
f902202b5e
Add scantailor package (#12833) 
* Add scantailor

* qt: Fix build w/ GCC9 for @4:

* qt: Fix patch filename and qt version

* Fix typo in patch name

* scantailor: Fix version

* scantailor: Use a more-modern fork

* scantailor: Remove unused patch file

Co-authored-by: Ruben Di Battista <ruben.di-battista@polytechnique.edu>
 2020-08-22 15:22:37 -05:00
Andreas Baumbach
27b9727926
Add new package arbor (#11914) 
* Add new package arbor

Change-Id: I70a442d6ad74979d13bd9f599df238c085d4baf9

* Update package.py

* add additional dependencies

* change download to tar-ball

* py26 compatibility

* restrict noqas and expand comment

Co-authored-by: Eric Müller <mueller@kip.uni-heidelberg.de>
 2020-08-22 14:42:46 -05:00
Brian Homerding
2e2c06121a
llvm-openmp-ompt: Additional dependencies and adding variant (#11266) 
* llvm-openmp-ompt: Additional dependencies and adding variant for disabling building libomptarget

* Flake8 fixes
 2020-08-22 14:23:04 -05:00
Levi Baber
d65b9ad195
mark: added new package (#10513) 
* mark: Create new package.

* mark: change description.

* mark: change description.

* mark: Delete set_up environment.

* mark: replace join_path(prefix.bin, mark) with prefix.bin.mark

* mark: new license and sha256 hash

Co-authored-by: lingnanyuan <1297162327@qq.com>
 2020-08-22 14:01:00 -05:00
Elizabeth Fischer
8ce5718922
qgis: Updates for proj@6 (#16172) 
* qgis

* Update package.py

QGIS 3.12.1 can use PROJ >= 4.9.3.  Therefore both version restrictions on PROJ were incorrect.
https://github.com/qgis/QGIS/blob/final-3_12_1/INSTALL

* Update package.py

Add explanation to (hopefully temporary) removal of hdf5 dependency.

* Remove overly restrictive GRASS version number.

* flake8

Co-authored-by: Elizabeth Fischer <elizabeth.fischer@alaska.edu>
 2020-08-22 13:22:57 -05:00
Erik Schnetter
488d8ae747
openmpi: Update hwloc version bounds (#18040) 
`openmpi @4:` can use `hwloc @2:`.
 2020-08-22 13:10:11 -05:00
Christoph Junghans
adc98ae409
votca*: add v1.6.2 (#18218) 2020-08-22 11:38:41 -06:00
darmac
74d274f02f
Add new package: consul (#18044) 
* Add new package: consul

* fix package type

* refine install phase
 2020-08-22 10:51:20 -05:00
srekolam
febc8ccb15
new recipe for rocalution and fix for rocm-smi-lib (#18211) 2020-08-21 13:34:06 -05:00
Jen Herting
512aa40151
[py-numba] added version 0.50.1 (#17880) 
* [py-numba] fixing upper limit for conditional dependency

* [py-numba] added version 0.50.1

* [py-numba] Specifying llvmlite version for new version
 2020-08-21 12:45:57 -05:00
Jen Herting
c24b838407
[py-llvmlite] new version 0.33.0 (#17878) 
* [py-llvmlite] new version 0.33.0

* [py-llvmlite] newer version of python required
 2020-08-21 10:54:06 -05:00
g-mathias
d222551185
namd: latest version 2.14 (#18167) 
* upgrade to version 2.14; added target architecture optimization

* renamed devel-> (adamjstuart); keep 2.14bx versions

Co-authored-by: lu64bag3 <gerald.mathias@lrz.de>
 2020-08-21 09:55:53 -05:00
Adam J. Stewart
07fc495c94
py-pandas: added v1.1.1 (#18206) 2020-08-21 08:49:32 +02:00
Ryan Mast
3a1334bc6a
helics: Add version 2.6.0 (#18208) 
* helics: Add version 2.6.0

* Remove bms version from HELICS package
 2020-08-20 22:24:46 -05:00
Jordan Ogas
1666db60d0
charliecloud: add 0.18 (#18200) 
* add 0.18, remove older versions

* update url

* fix typo
 2020-08-20 20:16:34 -05:00
Michael Kuhn
fc3b4657ce
sqlite: Add 3.33.0 (#18145) 2020-08-20 17:17:02 -05:00
g-mathias
880ff1d795
new dakota version 6.12; included boost versions limit; changed default url (#18168) 
Co-authored-by: lu64bag3 <gerald.mathias@lrz.de>
 2020-08-20 17:14:40 -05:00
vvolkl
6b6f6db431
[gaudi] sadly, the cmake fixes are postponed to next version (#18171) 2020-08-20 17:11:45 -05:00
vvolkl
cd06100001
[podio] new version, cxxstd 17 now mandatory (#18191) 2020-08-20 17:06:52 -05:00
Harmen Stoppels
ebe5a5652c
Add rocSPARSE, rocSOLVER, hipSPARSE and hipBLAS (#18108) 2020-08-20 14:55:02 -05:00
Massimiliano Culpo
573ce3fe81
gcc: fixed compilation on OpenSUSE (#18190) 
Set location for dependencies specifying explicitly both
the include and lib path. This permits to handle cases where
the libraries are installed in lib64 instead of lib.

fixes #17556
fixes #10842
closes #18150
 2020-08-20 17:42:18 +02:00
Marc Mengel
d5c3b876e0
detatch binutils usage from bootstrap in gcc variants (#18116) 2020-08-20 17:06:22 +02:00
vvolkl
286c3d6cbc
[lcio] set up run time paths (#18109) 
* [lcio] set up run time paths

* [lcio] update runtime

* [lcio] flake8
 2020-08-20 09:43:59 -05:00
Isaac Whitfield
b9adbac5c6
libimobiledevice: new package (#10819) 2020-08-20 11:22:04 +02:00
ketsubouchi
8a02ef4d51
bwa: patch Makefile to permit the use of compilers other than GCC (#18189) 2020-08-20 09:55:05 +02:00
Tim Haines
c786eb46bb
dyninst: use elfutils for all versions (#18063) 2020-08-20 08:36:02 +02:00
Elizabeth Fischer
306f3a1232
Make finding of NetCDF and HDF5 more explicit. (#18166) 
Co-authored-by: Elizabeth Fischer <elizabeth.fischer@alaska.edu>
 2020-08-20 08:34:53 +02:00
darmac
1650824ef5
Add new package: phoenix (#18143) 2020-08-19 20:33:37 -05:00
darmac
0187884591
qemu: add pkgconfig to avoid build error (#17929) 2020-08-19 20:32:47 -05:00
darmac
d9722e2730
nfs-ganesha: fix compile error on debian (#18102) 
* nfs-ganesha: fix compile error on debian

* add type for py-stsci-distutils
 2020-08-19 20:32:02 -05:00
darmac
bc2ff81a64
Add new package: presto (#18142) 2020-08-19 20:31:10 -05:00
darmac
472a32fb41
brigand: fix build error (#18173) 2020-08-19 20:30:33 -05:00
eugeneswalker
b5db5cf259
prepend ${NINJA_ROOT}/misc to PYTHONPATH in run environment (#18182) 2020-08-19 15:06:08 -07:00
Filippo Spiga
8e8071ffb6
[WIP] Adding Quantum ESPRESSO v6.6 (#18091) 
* Adding v6.6 (latest stable)

* There is no '-' in Quantum ESPRESSO

Co-authored-by: Filippo Spiga <fspiga@nvidia.com>
 2020-08-19 11:10:54 -05:00