Commit graph

2715 commits

Author SHA1 Message Date
Javier
6e68a01e50 New package - r-rmarkdown (#2422) 2016-11-28 09:14:00 -08:00
Javier
6c2729ae6f New package - r-repr (#2421) 2016-11-28 09:13:20 -08:00
Denis Davydov
d2d23b76da hdf5: fix for lib64 installation (#2349) 2016-11-28 09:12:48 -08:00
Denis Davydov
b47bd9cc00 scotch: fix compilation on macOS (#2326) 2016-11-26 16:48:50 -08:00
Javier
eeb9c84677 New package - r-rinside (#2416)
* New package - r-rinside

* Changes to pass flake8 test
2016-11-26 16:48:04 -08:00
Javier
1cdfc30374 New package - r-rsnns (#2415) 2016-11-26 16:47:56 -08:00
Javier
0c4e97b6a1 New package - r-rzmq (#2414)
* New package - r-rzmq

* Adding homepage
2016-11-26 16:47:47 -08:00
Javier
7baa6e824b New package - r-irdisplay (#2413) 2016-11-26 16:47:38 -08:00
Javier
cc0d08255c New package - r-hexbin (#2412) 2016-11-26 16:47:25 -08:00
Andrey Prokopenko
8f0b91edaa netcdf: multiple improvements (#2377)
- Added 'dap' and 'cdmremote' variants
  This is based on work in #2324 with the following motivation:
      Turn off DAP support by deafult.  DAP requires curl, which has issues
      with circular dependencies.  For 95% of NetCDF users that do not need
      DAP, turning it off avoides this rats nest of problems.
- Added 'parallel-netcdf' variant
  To support work with parallel-netcdf
- Added 'shared' and 'static' build separation
2016-11-24 13:52:28 -08:00
George Hartzell
cde8f697a9 Bugfix/update go packages (#2369)
* Update go-bootstrap package

The last C based Go src tree was the 1.4 series.  For a while they
were cutting new releases so that people could bootstrap from a C only
system.  Now they're recommending that you either use the release-1.4
branch or that you use a date-stamped tarball that they'll produce on
an as-needed basis.

There are several issues that keep 1.4.2 from building on a CentOS 7
system.

I've switched to the date based tarball.

The cgo bits were also mis-behaving, but they're not needed for the
bootstrapping task so I've set an environment variable that disables
them.

Details [on the install-from-source
page](https://golang.org/doc/install/source#go14) and these issues:

- https://github.com/golang/go/issues/17545
- https://github.com/golang/go/issues/16352.

* Update go package

Switched from pulling from the git repository to using the source
tarballs and added digest values.

Added support for 1.7.3, continued supporting 1.6.2, including patches
for a couple of problems (details in
[17545](https://github.com/golang/go/issues/17545) and
[17986](https://github.com/golang/go/issues/17986).

Dropped support for 1.5.4 and 1.4.2 because they no longer pass their
tests and the patches above to not apply.
2016-11-24 12:25:51 -08:00
Javier
9c267e9c73 Updated version - r-lattice (#2410) 2016-11-24 12:19:42 -08:00
Javier
09a5826903 New package - r-testit (#2409) 2016-11-24 12:19:10 -08:00
Javier
f4fc670ab4 New package - r-highr (#2408) 2016-11-24 12:19:05 -08:00
Javier
bb3239903b New package - r-knitr (#2407) 2016-11-24 12:19:01 -08:00
Javier
8949e67ce3 New package - r-gistr (#2406) 2016-11-24 12:18:57 -08:00
Javier
85638aad03 New package - r-formatr (#2405)
* New package - r-formatr

* Block comment should start with '# '
2016-11-24 12:18:47 -08:00
Javier
4214281ab3 New package - r-evaluate (#2404) 2016-11-24 12:18:41 -08:00
Gregory Lee
96bc3ff8f6 added qt variants for pyqt to build (#2389) 2016-11-23 14:10:12 -08:00
Jon Rood
a6db0bfae2 Updating SuperLU package file with ability to build version 4.3. (#2390)
* Updating SuperLU package file with ability to build version 4.3 (before they added cmake) with external blas or internal blas, and added capability to build the latest version 5.2.1 (with cmake) with internal blas.

* Updating SuperLU package file with suggested changes, i.e. reorganizing installation methods based on version, adding cmake dependency when necessary, removing any use of internal blas, and also adding fpic variant.

* Fixing flake8 failures.
2016-11-23 13:26:00 -08:00
Javier
7bda4e98b3 New package - r-catools (#2394)
* New package - r-catools

* Splitting lines to pass flake8 travis test
2016-11-23 10:57:47 -08:00
Javier
b085ce9e94 New package - r-partykit (#2395)
* New package - r-partykit

* Splitting lines to pass flake8 travis test
2016-11-23 10:57:23 -08:00
Javier
0eddf8421d New package - r-formula (#2396) 2016-11-23 10:56:59 -08:00
Javier
d6710a6aaf New package - r-deoptim (#2397) 2016-11-23 10:56:37 -08:00
Javier
74e6db9060 New package - r-c50 (#2393)
* Adding R library r-bitops

* New package - r-c50
2016-11-23 10:56:13 -08:00
Jon Rood
f8d038c0b8 New package yaml-cpp (#2399)
* Adding new package for yaml-cpp.

* Removing gcc specific c++11 flag. Adding fpic variant. Fixing formatting.
2016-11-23 10:54:22 -08:00
Matthew Scott Krafczyk
1fbe67af3d Update flex package url's and versions (#2384)
* Update flex package url's and versions

The old sourceforge page for flex is now defunct. While version 2.6.0
still downloads fine, later versions are no longer hosted there.
Development continues on github. I've adjusted urls to point to this
new location.

In addition, from 2.6.0 onwards, a new naming scheme for releases seems
to have been adopted. I've created a url_for_version function to sort
this out.

* Change flex to an AutotoolsPackage

Also move the url_for_version function to the end of the package
definition.

* Implement the autoreconf function for flex
2016-11-22 14:30:25 -08:00
becker33
5e73266572 Merge pull request #2291 from ax3l/topic-icet
Packages: Add IceT
2016-11-21 14:27:17 -08:00
Andrey Prokopenko
3954fc8545 llvm-lld: minor misprint fix 2016-11-21 16:22:31 -05:00
Denis Davydov
a5fb33b0e4 python: symlink lib64/python2.7/lib-dynload/ to lib/python2.7/lib-dynload/ (#2295) 2016-11-16 07:29:08 -07:00
becker33
93287b950b Merge pull request #1547 from citibeth/efischer/160816-PyPathspec
py-pathspec: New package
2016-11-14 15:13:21 -08:00
Axel Huebl
4b82d881dc
Add Package: IceT
Adds the IceT compositing library from Sandia/Kitware.
Most default functionality needed for image compositing is
added, OpenGL acceleration for very large displays is disabled.

Downstream usage:
  most VTK based software which supports parallel image compositing,
such as VisIt, Paraview and in our use-case
[ISAAC](https://github.com/ComputationalRadiationPhysics/isaac).
2016-11-13 16:50:14 -07:00
Kelly Thompson
05c6c40e36 Force the recipe for Lua to use the spack compiler. (#2299)
* Force the recipe for Lua to use the spack compiler.

I'm not sure how the old recipe worked for anyone. The Lua Makefiles set
`CC=gcc` and for my spack environment the first `gcc` found in my `PATH` is
`$SPACK_ROOT/lib/spack/env/gcc`, which is a directory. This caused the build
to fail. My change drops the `-std=gnu99`, but this option doesn't appear
to be required for a sucessful build.

* Preserve the '-std=gnu99' compile option.
2016-11-12 21:46:59 -07:00
Elizabeth Fischer
8c0c3263e2 Simplify the CMake build to make it more robust. (#2325)
* Simplify the CMake build to make it more robust.

* ncurses on by default.
2016-11-12 21:26:40 -07:00
Todd Gamblin
a5934fcaa6 Remove automake dep in libelf. (#2328) 2016-11-12 21:25:14 -07:00
Adam J. Stewart
09470ec672 Add VizGlow package (#2298) 2016-11-10 21:55:27 -08:00
Axel Huebl
42cc997aea Packages: Add Jansson (#2287)
This adds the built recipe for
[Jansson](http://www.digip.org/jansson/),
*a C library for encoding, decoding and manipulating JSON data.*

GitHub Repo: https://github.com/akheron/jansson

Downstream Usage:
  In [ISAAC](https://github.com/ComputationalRadiationPhysics/isaac)
which is an *in situ visualization library* based on
  [alpaka](https://github.com/ComputationalRadiationPhysics/alpaka)
and/or CUDA which is used in
  [PIConGPU](https://github.com/ComputationalRadiationPhysics/picongpu).
2016-11-10 21:52:49 -08:00
Denis Davydov
7cb756cdbb tree: use Spack's compiler and fix installation on macOS (#2293) 2016-11-10 21:52:22 -08:00
Axel Huebl
26ed2327ae Packages: Add libwebsockets (#2288)
This adds the built recipe for
[libwebsockets](https://libwebsockets.org/lws-api-doc-master/html/index.html),
a *C library for lightweight websocket clients and servers*.

GitHub Repo: https://github.com/warmcat/libwebsockets

Downstream Usage:
  In [ISAAC](https://github.com/ComputationalRadiationPhysics/isaac)
which is an *in situ visualization library* based on
  [alpaka](https://github.com/ComputationalRadiationPhysics/alpaka)
and/or CUDA which is used in
  [PIConGPU](https://github.com/ComputationalRadiationPhysics/picongpu).
2016-11-10 21:51:50 -08:00
Adam J. Stewart
99cf7b4ab3 Run HDF 5 tests post-installation (#2297) 2016-11-10 21:50:32 -08:00
christianbaensch
2e11e7e456 Update package.py with/out CUDA support (#2266)
Adding some lines to prevent from using any CUDA stuff, if NVIDIA CUDA Developement Kit was installed before.
2016-11-09 07:37:40 -08:00
Massimiliano Culpo
e5edac8af6 zlib, tar: passed to AutotoolsPackage (#2273) 2016-11-09 07:37:08 -08:00
Gregory Lee
1b64213b10 added numpy version 1.11.2 and moved url to pypi.io (#2286) 2016-11-09 07:35:30 -08:00
Oliver Breitwieser
98f27a89ec Add py-pudb package (#2289) 2016-11-09 07:34:30 -08:00
Oliver Breitwieser
68f79043aa Add 1.5.3 for py-matplotlib and moved to pypi.io (#2271)
* Added version 1.5.3 for py-matplotlib

* Updated url to pypi.io so all versions are properly downloaded.
2016-11-09 07:34:17 -08:00
Sergey Kosukhin
4457c6a2ad Updated environment-modules package: (#2279)
Added 'lib64' directory as a possible option where tclConfig.sh file can be found.
2016-11-08 07:19:31 -08:00
Pramod Kumbhar
ba58a9f30d fix tau installation issue (#2269)
* fix tau installation issue : setup_environment() is
called before install phase when 'Makefile.*' doesn't
exist (causing list index out of range error).

* Added detailed comment suggested by @alalazo
2016-11-08 07:18:14 -08:00
Gregory Lee
1f5ca24197 Merge pull request #2197 from skosukhin/ext_bugfix
Updated python package reflecting the changes in 9347f86
2016-11-07 16:05:57 -08:00
Adam J. Stewart
ca5f713282 Further restrict versions of GCC patched (#2259) 2016-11-06 15:31:48 -08:00
Michael Kuron
6f2c05b888 Add PFFT parallel FFT package (#2255)
* Add PFFT parallel FFT package

* pfft: fix non-double precision
2016-11-05 12:19:19 -07:00