Commit graph

32637 commits

Author SHA1 Message Date
Richard Berger
61f0088a27
Spiner and ports-of-call updates (#39437)
* ports-of-call: new version 1.5.2
* spiner: new version 1.6.2
2023-08-14 22:22:52 -04:00
markus-ferrell
c202a045e6
Windows: executable/path handling (#37762)
Windows executable paths can have spaces in them, which was leading to
errors when constructing Executable objects: the parser was intended
to handle cases where users could provide an executable along with one
or more space-delimited arguments.

* Executable now assumes that it is constructed with a string argument
  that represents the path to the executable, but no additional arguments.
* Invocations of Executable.__init__ that depended on this have been
  updated (this includes the core, tests, and one instance of builtin
  repository package).
* The error handling for failed invocations of Executable.__call__ now
  includes a check for whether the executable name/path contains a
  space, to help users debug cases where they (now incorrectly)
  concatenate the path and the arguments.
2023-08-14 23:29:12 +00:00
Bryan Herman
843e1e80f0
fuse-overlayfs needs pkgconfig to build (#39431) 2023-08-14 19:19:07 -04:00
Paul Kuberry
643c028308
xyce: Disable CMake test for OneAPI (#39429) 2023-08-14 13:27:33 -07:00
markus-ferrell
d823037c40
Windows: enable "spack install" tests (#34696)
* The module-level skip for tests in `cmd.install` on Windows is removed.
  A few classes of errors still persist:

  * Cdash tests are not working on Windows
  * Tests for failed installs are also not working (this will require
    investigating bugs in output redirection)
  * Environments are not yet supported on Windows

  overall though, this enables testing of most basic uses of "spack install"
* Git repositories cached for version lookups were using a layout that
  mimicked the URL as much as possible. This was useful for listing the
  cache directory and understanding what was present at a glance, but
  the paths were overly long on Windows. On all systems, the layout is
  now a single directory based on a hash of the Git URL and is shortened
  (which ensures a consistent and acceptable length, and also avoids
  special characters).
  * In particular, this removes util.url.parse_git_url and its associated
    test, which were used exclusively for generating the git cache layout
* Bootstrapping is now enabled for unit tests on Windows
2023-08-14 13:15:40 -07:00
Bryan Herman
4d945be955
fixed build of libfuse need werror (#39430) 2023-08-14 14:39:40 -04:00
eugeneswalker
a4ac3f2767
trilinos@14.4.0 +kokkos: use external kokkos (#39397) 2023-08-14 14:29:13 -04:00
Massimiliano Culpo
6e31676b29
Fix style issues with latest versions of tools (#39422) 2023-08-14 12:38:59 -04:00
Mikael Simberg
1fff0241f2
Add Boost 1.83.0 (#39415) 2023-08-14 12:28:44 -04:00
Harmen Stoppels
a2a52dfb21
Fix containerize view symlink issue (#39419) 2023-08-14 16:02:48 +00:00
Mikael Simberg
f0ed159a1b
Add patch to build silo on nixos (#39375)
Change the shebang in mkinc from /usr/bin/perl to /usr/bin/env perl for
portability to systems that don't necessarily have perl in /usr/bin.
Also adds perl as a build-time dependency.
2023-08-14 17:03:13 +02:00
Mikael Simberg
9bf7fa0067
Add fmt 10.1.0 (#39413) 2023-08-14 17:01:34 +02:00
Mikael Simberg
fbaea0336e
mold: add v2.0.0 (#39416) 2023-08-14 10:53:34 -04:00
Brian Van Essen
1673d3e322
Added package for the hipTT library (#39388) 2023-08-14 16:11:30 +02:00
Wouter Deconinck
c7cca3aa8d
dd4hep: new version 1.26 (#39230)
Release notes: https://github.com/AIDASoft/DD4hep/releases/tag/v01-26

Diff: https://github.com/AIDASoft/DD4hep/compare/v01-25-01...v01-26

Relevant changes:
- updated requirements on cmake,
- can now support compressed hepmc3.

---------

Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-14 15:56:40 +02:00
Harmen Stoppels
da46b63a34
Fix broken semver regex (#39414) 2023-08-14 15:38:06 +02:00
Harmen Stoppels
c882214273
spack bootstrap dev: detect git as an external (#39417)
#36770 added git as a dependency to `setuptools-scm`. This in turn makes `git` a
transitive dependency for our bootstrapping process. 

Since `git` may take a long time to build, and is found on most systems, try to 
detect it as an external.
2023-08-14 10:29:15 +00:00
Pariksheet Nanda
2bacab0402
arrow: fix conditional spec expression (#38212) (#38213) 2023-08-14 09:27:50 +02:00
Hao Lyu
0681d9a157
wrf: add v4.5.1 (#39291) 2023-08-14 09:20:56 +02:00
Audrius Kalpokas
887847610e
gromacs: add plumed 2.8.3-2.9.0 variants (#39411) 2023-08-14 09:17:16 +02:00
Pariksheet Nanda
282a01ef76
py-scikits-odes: add a new package (#39061) 2023-08-14 02:00:03 +00:00
Adam J. Stewart
151c551781
Python: fix Apple Clang +optimizations build (#39412) 2023-08-13 21:47:47 -04:00
Hariharan Devarajan
abbd1abc1a
release 0.0.1 py-dlio-profiler-py (#39377) 2023-08-13 12:20:58 -05:00
Wouter Deconinck
49c505cc14
py-pyliblzma: remove python2 package (#39399)
Last release 13 years ago, before python 3.2 was released. No depedendents or next of kin could be located.
2023-08-13 11:57:52 -05:00
Sergey Kosukhin
237a56a305
autotools: set 'ldlibs' as 'LIBS' (#17254) 2023-08-13 00:38:10 -07:00
Harmen Stoppels
7e7e6c2797
bazel: pretty print is all but pretty (#35963)
* bazel: pretty print is all but pretty
* Don't ask bazel to explain what it's up to
2023-08-12 20:43:09 -04:00
Alex Richert
e67c61aac0
Allow static-only openssl on Linux (#38098) 2023-08-12 20:42:53 +02:00
Scott Wittenburg
1b1ed1b1fa
ci: continue to support SPACK_SIGNING_KEY (#39170) 2023-08-12 08:52:46 -07:00
snehring
ec0e51316b
usalign: update checksum (#39400) 2023-08-12 08:40:44 -07:00
Vicente Bolea
533821e46f
adios2: add mgard variant (#39405) 2023-08-12 08:38:33 -07:00
Wouter Deconinck
6c5d125cb0
cernlib: new variant shared (#39406)
This allows users to install cernlib with static libraries only, instead of both static and shared.
2023-08-12 08:34:48 -07:00
Richard Berger
668fb1201f
lammps: new stable versions, deprecate older patch versions (#39317) 2023-08-12 09:57:38 +02:00
Adam J. Stewart
f7918fd8ab
Python: remove maintainer (#39384) 2023-08-12 09:08:25 +02:00
Axel Huebl
fc1996e0fa
WarpX 23.07 (#39108)
* WarpX 23.07

Update WarpX and related Python packages to the lastest releases.

* py-picmistandard: refresh hashes

Keeping even a single `git` version in here confuses the fetcher.
Remove broken old versions.

* Remove `py-warpx` versions with broken PICMI
2023-08-11 17:35:04 -07:00
eugeneswalker
ed3aaafd73
e4s cray sles ci: expand spec list (#39081)
* e4s cray sles ci: expand spec list

* flux-core: disable until python+gary-sles issue is resolved
2023-08-11 23:42:10 +00:00
Wouter Deconinck
63bb2c9bad
py-cryptography: does not run-depend on py-setuptools-rust (#39386)
* py-cryptography: does not run-depend on py-setuptools-rust

* py-cryptography: depens_on py-setuptools-rust when @3.4.2:

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-cryptography: re-add depends_on type=run for narrow range

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-08-11 17:53:25 +00:00
Alex Richert
a67455707a
ncl: add support for grib (#39277)
Co-authored-by: Alex Richert <alexander.richert@noaa.gov>
2023-08-11 08:42:08 +00:00
Cristian Di Pietrantonio
09ca71dbe0
kokkos: rename 'std' variant to 'cxxstd'. (#39319)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-11 07:18:02 +00:00
Todd Gamblin
ea082539e4
Revert "package import: remove magic import line (#39183)" (#39380)
This reverts commit 8e7c53a8ba.
2023-08-11 09:04:40 +02:00
Massimiliano Culpo
143146f4f3
spack.repo: uppercase the global PATH variable (#39372)
This makes the name of the global variable representing
the repository currently in use uppercase. Doing so is advised
by pylint rules, and helps to identify where the global is used.
2023-08-11 09:04:16 +02:00
Melven Roehrig-Zoellner
ee6ae402aa
qt: fedora patch missing includes in qtlocation (#38987) 2023-08-11 08:10:06 +02:00
Adam J. Stewart
0b26b26821
GDAL: fix supported versions of HDF5 (#39378) 2023-08-11 08:02:15 +02:00
dependabot[bot]
c764f9b1ab
build(deps): bump mypy from 1.4.1 to 1.5.0 in /lib/spack/docs (#39383)
Bumps [mypy](https://github.com/python/mypy) from 1.4.1 to 1.5.0.
- [Commits](https://github.com/python/mypy/compare/v1.4.1...v1.5.0)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-08-11 08:01:34 +02:00
William R Tobin
db19d83ea7
essl: add +lapackforessl variant (#39362) 2023-08-11 08:01:02 +02:00
Gregor Daiß
24256be6d6
sgpp: fix build issues (#39086)
* fix(sgpp): Fix installation phase scons args

* fix(sgpp): Workaround for distutils deprecation

The distutils deprecation warning in Python 3.10 - 3.11 caused
problems within the SGpp SConfigure checks by causing failures
when looking for Python.h. This commit works around this by adding a
patch that simply disables the warning. It also puts limits on the
python dependency version until distutils is removed from SGpp.

* fix(sgpp): cleanup and simplify

* fix(sgpp): Fix style
2023-08-11 07:55:44 +02:00
Sergey Kosukhin
633723236e
mpich: fix building with NVHPC (#39082) 2023-08-11 07:29:16 +02:00
Yan
381f31e69e
py-flit: add 3.8 and 3.9 (#39307) 2023-08-10 20:23:58 -04:00
Massimiliano Culpo
9438cac219
Fix conflicts on direct dependencies that don't start with ^ (#39369) 2023-08-10 16:58:05 -04:00
Harmen Stoppels
85cf66f650
git: add new versions, deprecated / drop versions (#39368)
Remove git versions deprecated in Spack 0.19
2023-08-10 21:12:23 +02:00
markus-ferrell
f3c080e546
Windows build systems: use ninja and enable tests (#33589)
* Set default CMake generator is ninja on Windows
* Enable build systems tests (except for autotools/make)
2023-08-10 17:16:23 +00:00