Commit graph

35438 commits

Author SHA1 Message Date
Alex Leute
8d9d721f07
py-postcactus: new package (#42907)
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2024-03-20 18:50:52 +01:00
Greg Becker
ecef72c471
Target.optimization_flags converts non-numeric versions to numeric (#43179) 2024-03-20 09:39:26 -07:00
Robert Cohn
485b6e2170
Update Intel download URLs (#43286) 2024-03-20 12:34:03 -04:00
mvlopri
ba02c6b70f
seacas: update the variants and tpls (#43195)
Adds variants to turn off tests
Add variants for some missing TPL options
Add the variables required to build in ~shared

* Add pamgen to Trilinos as a variant to support SEACAS

This adds the ability to turn off and on pamgen as needed
through the variant interface for the Trilinos package.py.
Add changes for seacas package.py to build the appropriate
Trilinos variants.
Add zlib-api as depends_on instead of zlib directly for SEACAS
package.py

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-03-20 10:14:24 -06:00
Juan Miguel Carceller
7028669d50
fastjet: add version 3.4.2 (#43285)
* fastjet: add version 3.4.2

* Change the range of the ATLAS patch

---------

Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-03-20 16:46:09 +01:00
Dom Heinzeller
2f0a73f7ef
Define variant typescript for py-jupyter-server with explicit dependency on npm (#43279)
* Add variant typescript for py-jupyter-server@:1, which then requires npm/node. Patch the build system for ~typescript so that it doesn't find any npm/node installations and attempts to build the typescript extension even though it shouldn't

* Fix formatting in var/spack/repos/builtin/packages/py-jupyter-server/package.py

* Constrain typescript variant to py-jupyter-server versions 1.10.2:1

* with when not needed if variant doesn't exist for other versions
2024-03-20 08:03:18 -06:00
Massimiliano Culpo
7cb0dbf77a
Remove optimization criterion on OS mismatches (#43282) 2024-03-20 04:57:56 -06:00
G-Ragghianti
ac8800ffc7
heffte: Update MKL dependency to intel-oneapi-mkl (#43273) 2024-03-20 03:28:21 -06:00
Richard Berger
eb11fa7d18
lua-sol2: merge duplicate sol2 package into it (#43155) 2024-03-20 03:22:58 -06:00
Mikael Simberg
4d8381a775
fmt: Add master branch as version (#43239) 2024-03-20 03:18:06 -06:00
jmlapre
de5e20fc21
py-snoop: new package (#42945) 2024-03-20 01:18:24 +01:00
Adam J. Stewart
c33af49ed5
py-keras: add v3.1.0 (#43268) 2024-03-20 01:10:14 +01:00
Martin Aumüller
3addda6c4d
mgard: disable C++11 warning also for apple-clang@15 (#43170) 2024-03-19 17:27:42 -06:00
AMD Toolchain Support
33f6f55d6b
aocl-sparse: fix inconsistency in dependency logic (#43259) 2024-03-19 16:45:39 -06:00
AMD Toolchain Support
41d20d3731
amdblibm: add support for parallel build (#43258) 2024-03-19 16:45:09 -06:00
Bill Williams
dde8fa5561
scorep: add conflict for ROCm6 (#43240)
Co-authored-by: William Williams <william.williams@tu-dresden.de>
Co-authored-by: wrwilliams <wrwilliams@users.noreply.github.com>
2024-03-19 16:40:08 -06:00
Mikael Simberg
588a94bc8c
apex: add v2.6.5 (#43242) 2024-03-19 16:02:58 -06:00
Alec Scott
06392f2c01
gnutls: add v3.8.3 (#43229)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-03-19 22:23:19 +01:00
Tom Payerle
f16e29559e
n2p2: add --no-print-directory flag to calls to "make" (#43196)
This should fix issue #43192

Basically, had issue where a make variable was set to the output
of a shell function which included cd commands, and then the value
of that variable used as a makefile target.

The cd commands in the shell function caused assorted informational
messages (e.g. "Entering directory ...") which got included in the
return of the shell function, corrupting the value of the variable.
The presence of colons in the corrupted value caused make to issue
"multiple target" erros.

This fix adds --no-print-directory flags to the calls to the
make function in the package's build method, which resolves the
issue above.

It is admittedly a crude fix, and will remove *all* informational
messages re directory changes, thereby potentially making it more
difficult to diagnose/debug future issues building this package.
However, I do not see a way for to turn off these messages in a
more surgical manner.
2024-03-19 20:04:15 +01:00
Rémi Lacroix
ea96403157
ffmpeg: Fix patch hash (#43269) 2024-03-19 19:46:02 +01:00
G-Ragghianti
b659eac453
slate: add v2023.11.05 (#42913)
* Updated version of slate

* Added rocm version conflict

* Added patch to fix openMP problem
2024-03-19 08:58:34 -07:00
John W. Parent
ab590cc03a
WGL: Update libs for new archspec on Win (#43253) 2024-03-19 09:43:29 -06:00
Harmen Stoppels
1a007a842b
cmake: deprecate old patch releases and add missing gmake dep (#43261) 2024-03-19 15:41:50 +01:00
Martin Aumüller
9756354998
mgard: don't restrict protobuf version more than necessary (#43172)
* mgard: don't restrict protobuf version more than necessary

successfully built:
mgard@2022-11-18 ^protobuf@3.{4,21,25}
mgard@2023-01-10 ^protobuf@3.{4,25}
mgard@2023-03-31 ^protobuf@3.{4,25}

compile failures:
mgard@2022-11-18 ^protobuf@3.3
mgard@2023-01-10 ^protobuf@3.3
mgard@2023-03-31 ^protobuf@3.3

* mgard: add conflicts to address CI errors

* mgard: conflict between cuda and abseil@20240116.1

compiling mgard+cuda with gcc@12.3.0 and nvcc from cuda@12.3.0 against
protobuf pulling in abseil-cpp@20240116.1 results in the errors reported
here: https://github.com/abseil/abseil-cpp/issues/1629
2024-03-19 09:29:44 +01:00
Sinan
3984dd750c
package/py-setuptools_add_new_versions (#43180)
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-03-18 12:33:39 -06:00
Gregor Daiß
d5c1e16e43
sgpp: update dependency versions (#43178)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-03-18 15:52:16 +01:00
Sinan
56ace9a087
py-wand: add v0.6.13 (#42972) 2024-03-18 15:13:50 +01:00
jdomke
6e0bab1706
fujitsu-mpi: add gcc and clang support (#43053)
Co-authored-by: domke <673751-domke@users.noreply.gitlab.com>
2024-03-18 15:12:44 +01:00
John W. Parent
193386f6ac
netcdfc: consider static build in pkgconf filtering (#43084) 2024-03-18 14:40:32 +01:00
Christopher Christofi
755131fcdf
py-optax: add new version (#43169) 2024-03-18 14:19:53 +01:00
dependabot[bot]
9a71733adb
build(deps): bump docker/setup-buildx-action from 3.1.0 to 3.2.0 (#43204)
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 3.1.0 to 3.2.0.
- [Release notes](https://github.com/docker/setup-buildx-action/releases)
- [Commits](0d103c3126...2b51285047)

---
updated-dependencies:
- dependency-name: docker/setup-buildx-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-03-18 14:10:11 +01:00
dependabot[bot]
cd919d51ea
build(deps): bump docker/build-push-action from 5.2.0 to 5.3.0 (#43205)
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 5.2.0 to 5.3.0.
- [Release notes](https://github.com/docker/build-push-action/releases)
- [Commits](af5a7ed5ba...2cdde995de)

---
updated-dependencies:
- dependency-name: docker/build-push-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-03-18 14:09:29 +01:00
George Young
12adf66d07
telocal: add new package (#43241)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-03-18 07:08:32 -06:00
afzpatel
c02f58da8f
llvm-amdgpu: add rpath to HIP rt (#42876) 2024-03-18 13:37:27 +01:00
Harmen Stoppels
9662d181a0
use directives in some packages (#43238) 2024-03-18 12:53:53 +01:00
Alec Scott
282df7aecc
fzf: add v0.48.0 (#43230) 2024-03-18 12:53:37 +01:00
wspear
b4c0e6f03b
scorep: add v8.4 (#43225) 2024-03-18 11:23:28 +01:00
Wileam Y. Phan
4cd8488139
intel-gtpin: add version 4.0 (#43216) 2024-03-18 11:09:29 +01:00
George Young
69a052841c
py-cutadapt: updating to @4.7 (#43214)
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-03-18 11:08:14 +01:00
Matthias Wolf
a3f39890c2
py-shacl: new version, update dependencies (#42905)
* py-shacl: new version, update dependencies

Also updates the dependencies py-prettytable and py-rdflib.

* review comments

* Update var/spack/repos/builtin/packages/py-pyshacl/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-poetry-core: add required 1.8.1

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-03-18 10:56:40 +01:00
Christopher Christofi
02d126ce2b
py-geopandas: add new version 0.14.3 (#43235)
* py-geopandas: add new version

* add when specification on setuptools requirement
2024-03-18 10:52:19 +01:00
Christopher Christofi
339a63370f
py-pyshp: add new version (#43234) 2024-03-18 10:23:11 +01:00
Christopher Christofi
fef6aed627
py-branca: add new package (#43236) 2024-03-18 10:16:58 +01:00
afzpatel
3445da807e
rocm-smi-lib: remove standalone test and add build time test (#43129) 2024-03-18 10:13:08 +01:00
Pieter P
429c3598af
Fix CMake generator documentation (#43232) 2024-03-18 10:02:33 +01:00
Todd Gamblin
3d8136493a
performance: avoid jinja2 import at startup unless needed (#43237)
`jinja2` can be a costly import, and right now it happens at startup every time we run
Spack. This slows down `spack --print-shell-vars` a bit, which is needed by `setup-env.*sh`.
2024-03-18 10:00:37 +01:00
Sergey Kosukhin
8cd160db85
zlib-ng: add variant new_strategies (#43219) 2024-03-18 09:42:43 +01:00
Simon Pintarelli
a7dd756b34
gcc 12.3 ICE patch for aarch64 (#43093)
* gcc12.3 patch for ICE on aarch64

* aarch64 ICE patch for gcc@13.2
2024-03-18 09:12:49 +01:00
Thomas Padioleau
53be280681
Remove bundled fmt (#43210) 2024-03-17 21:43:40 -07:00
Seth R. Johnson
5ab10d57be
geant4: add matinainer, clean args (#43218) 2024-03-16 17:29:03 +00:00