Denis Davydov
6d714e4425
flake8 fixes for superlu-dist
2016-06-15 18:31:39 +02:00
Denis Davydov
3d3a26cd9a
flake8 fixes for filesystem.py
2016-06-15 18:31:10 +02:00
Ben Boeckel
36decbfa69
tty: do not break long words
...
These "words" tend to be file paths which are best left unbroken.
Fixes #1057 .
2016-06-15 12:22:35 -04:00
Denis Davydov
d0d83cfe1e
slepc: build by default with Arpack
2016-06-15 18:21:13 +02:00
Denis Davydov
d04dc8440f
dealii: specify petsc/slepc version dependencies
2016-06-15 18:21:13 +02:00
Denis Davydov
4d40f86bd3
trilinos: add 12.6.2 and 12.6.3
2016-06-15 18:21:13 +02:00
Denis Davydov
5358ffbe5a
slepc: add 3.6.3 and 3.7.1; specify petsc version dependency
2016-06-15 18:21:13 +02:00
Denis Davydov
9ceb8fea78
petsc: add 3.6.4 and 3.7.2; specify superlu-dist version dependency
2016-06-15 18:21:13 +02:00
Denis Davydov
a860a3d614
superlu-dist: avoid harcoding blas/lapack/mpi; remove preferred version
2016-06-15 18:21:13 +02:00
Todd Gamblin
c803f7ae98
Merge pull request #1045 from eschnett/eschnett/openmpi-verbs-usr
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Do not pass "/usr" or "/usr/local" as path to configure
2016-06-15 09:06:12 -07:00
Todd Gamblin
4ede87a8b0
Merge pull request #1058 from eschnett/eschnett/blosc
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Add packages c-blosc and hdf5-blosc
2016-06-15 09:04:48 -07:00
Todd Gamblin
9dd1f2747a
Merge pull request #1028 from JRWynneIII/boost-graph-parallel-fix
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Add variant for boost graph and parallel graph
2016-06-15 09:03:01 -07:00
Todd Gamblin
08badb5a35
Merge pull request #1040 from KineticTheory/pkg-trilinos
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Make Boost an optional feature of Trilinos.
2016-06-15 08:57:38 -07:00
Todd Gamblin
ff3469385b
Merge pull request #1037 from KineticTheory/develop
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Package serf also depends on zlib.
2016-06-15 08:57:14 -07:00
Todd Gamblin
bfedeadacb
Merge pull request #1031 from opoplawski/pcre
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Add patch to compile pcre with Intel 16.0.3 compiler
2016-06-15 08:56:53 -07:00
Todd Gamblin
a19c8b343e
Merge pull request #1051 from daboehme/develop
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Use https for github in Caliper package
2016-06-15 08:56:11 -07:00
alalazo
b09bee8158
qa : fixed flake8 issues
2016-06-15 13:29:30 +02:00
alalazo
b59d4f243b
openmpi, mvapich2, mpich : filtered out "--Wl,--enable-new-dtag" in wrappers, as it turns RPATH into RUNPATH
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Apart from that turned `os.path.join` into `join_path` and `os.environ` into `env` in the packages
2016-06-15 13:21:39 +02:00
Erik Schnetter
05d7378da5
Install shared libraries correctly on Linux
2016-06-14 17:13:20 -04:00
Erik Schnetter
ca5180f7a2
Correct Blosc install on Darwin
2016-06-14 17:03:00 -04:00
Erik Schnetter
e6ec372926
Add packages c-blosc and hdf5-blosc
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c-blosc provides the Blosc compression filter, and hdf5-blosc provides a plugin for HDF5 to use that filter.
2016-06-14 09:59:48 -04:00
Glenn Johnson
e226837d33
Fix flake8 error.
2016-06-13 23:04:26 -05:00
Glenn Johnson
8861c99333
New package - r-foreign
2016-06-13 22:50:07 -05:00
Glenn Johnson
5ba5ef6c46
Add list_url for older versions.
2016-06-13 17:50:27 -05:00
Glenn Johnson
94d0f21823
New package - r-xlsxjars
2016-06-13 17:50:06 -05:00
Glenn Johnson
4767185082
New package - r-xlsx
2016-06-13 17:48:59 -05:00
Glenn Johnson
5cd09af066
New package - r-XLConnect
2016-06-13 17:48:44 -05:00
Glenn Johnson
3c234a7d3b
New package - r-XLConnectJars
2016-06-13 17:36:50 -05:00
Glenn Johnson
450b082daf
Do not need to depend on jdk here because R itself does.
2016-06-13 17:35:35 -05:00
Glenn Johnson
427fa7fd0a
New package - rJava
2016-06-13 17:26:01 -05:00
David Boehme
52160bff18
Use https for github
2016-06-13 11:47:28 -07:00
Glenn Johnson
d398ebe21f
New package - r-RSQLite
2016-06-12 22:06:06 -05:00
Glenn Johnson
b96b32e9ec
New package - r-RPostgreSQL
2016-06-12 22:05:45 -05:00
Glenn Johnson
77e8096a6f
New package - r-RODBC
2016-06-12 22:05:26 -05:00
Glenn Johnson
bfb0985c38
New package - r-RMySQL
2016-06-12 22:05:10 -05:00
Glenn Johnson
a7a640bfb8
New package - rDBI
2016-06-12 22:04:37 -05:00
Glenn Johnson
b05a565648
New package - mariadb
2016-06-12 22:04:09 -05:00
Glenn Johnson
5d3965c7a6
New package - unixODBC
2016-06-12 22:03:24 -05:00
Glenn Johnson
7727f6fc7e
New package - libaio
2016-06-12 22:02:46 -05:00
Glenn Johnson
4dcb15cf6d
Ran through autopep8 and cleaned up.
2016-06-12 22:00:49 -05:00
Glenn Johnson
bdb9af63ed
Add version 9.5.3 and add readline as a dependency.
2016-06-12 21:58:41 -05:00
Glenn Johnson
8ff7cbb9ce
Run binutils/package.py through autopep8.
2016-06-12 21:57:03 -05:00
Glenn Johnson
1601cf1b14
Patch binutils
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This commit adds a patch to update symbol versions from linker scripts.
This is seen with libmysqlclient.so which has to maintain compatibility
across two versions. Only one can be the default.
https://sourceware.org/git/gitweb.cgi?p=binutils-gdb.git;a=commitdiff;h=544ddf9322b1b83982e5cb84a54d084ee7e718ea
2016-06-12 21:46:11 -05:00
Kelly (KT) Thompson
31d2c38687
Update formatting to meet code style requirements.
2016-06-12 19:56:29 -06:00
Kelly (KT) Thompson
b89bcdff62
Make Boost an optional feature of Trilinos.
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I have been unable to build Boost with some toolset/platform combinations. The
users I support don't need the Boost features in Trilinos, so I have been
manually hacking trilinos/package.py to disable boost. I would like to propose
that these changes be added to the released version.
+ Add boost as a variant, default to true so there is no change to existing
behavior.
+ Move the CMake configure options related to Boost into a conditional block
that is triggered by "if '+boost' in spec".
2016-06-12 19:48:45 -06:00
Tom Scogland
1b28991e0a
Merge pull request #1026 from epfl-scitas/packages/lmod
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lmod : updated package and dependencies
2016-06-12 17:01:41 -07:00
Massimiliano Culpo
30c9d976f6
environment : added more logic to treat append and prepend path
2016-06-12 18:54:56 +02:00
alalazo
5300ffac7f
qa : fixed flak8 checks
2016-06-12 15:11:26 +02:00
alalazo
a6681f2d7f
environment modules : added function to construct them from source files
2016-06-12 15:06:17 +02:00
Glenn Johnson
59c9816dbf
Make quotations in variables consistent.
2016-06-11 16:01:23 -05:00
