Sergey Kosukhin
29f1e8395c
mpich: fix rpath flags in mpif90 when building with oneapi ( #33319 )
...
Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com>
2022-10-29 12:17:43 -06:00
Jonas Thies
83b49070e6
phist: add/update conflicts with cray-libsci and/or python@3.11: for … ( #33587 )
...
* phist: add/update conflicts with cray-libsci and/or python@3.11: for versions <1.11.2
* phist: style fix
2022-10-29 10:12:26 -07:00
eugeneswalker
ef8c15c5ef
czmq %oneapi: -Wno-error: gnu-null-pointer-arithmetic, strict-prototypes ( #33586 )
2022-10-29 06:14:15 -06:00
eugeneswalker
c10d525956
json-c %oneapi: add -Wno-error=implicit-function-declaration ( #33585 )
2022-10-29 06:13:54 -06:00
Satish Balay
6edb20c7a6
mumps: update URLs, and add versions 5.5.0, 5.5.1 ( #33597 )
2022-10-29 11:34:45 +02:00
Axel Huebl
b06c5a43d9
WarpX 22.10 & PICMI-Standard ( #33594 )
...
Update `warpx` & `py-warpx` to the latest release, `22.10`.
Update `py-picmistandard` accordingly.
2022-10-29 11:27:46 +02:00
Adam J. Stewart
06bac4a487
libtiff: CMake support, internal codecs variants ( #33591 )
2022-10-29 06:36:14 +02:00
Brian Van Essen
6c5a7fefd6
Fixed a bad variant when statement for including cuDNN. ( #33595 )
2022-10-28 13:21:50 -06:00
Luke Diorio-Toth
04f87da36b
new packages (py-auditwheel, py-medaka, py-parasail, py-progressbar33, py-pyspoa) and updates to others (py-scikit-build, py-ont-fast5-api) ( #33541 )
...
* Added py-medaka and dependencies
* fixed py-parasail build error
* medaka still doesn't have correct linked libdeflate
* fixed pyspoa deps
* added htslib.patch, confirmed builds and runs
* fixed style
* Update var/spack/repos/builtin/packages/py-auditwheel/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* made requested changes
* added targets for pyspoa dep
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-10-28 14:05:15 -05:00
Satish Balay
f74a6a4503
netlib-scalapack: fix build error with oneapi compilers ( #33539 )
...
/home/xsdk/spack.x/lib/spack/env/oneapi/icx -DAdd_ -Dscalapack_EXPORTS -I/opt/intel/oneapi/mpi/2021.7.0/include -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/scalapack.dir/BLACS/SRC/dgamx2d_.c.o -MF CMakeFiles/scalapack.dir/BLACS/SRC/dgamx2d_.c.o.d -o CMakeFiles/scalapack.dir/BLACS/SRC/dgamx2d_.c.o -c /home/xsdk/spack.x/spack-stage/spack-stage-netlib-scalapack-2.2.0-uj3jepiowz5is4hmdmjrzjltetgdr3lx/spack-src/BLACS/SRC/dgamx2d_.c
/home/xsdk/spack.x/spack-stage/spack-stage-netlib-scalapack-2.2.0-uj3jepiowz5is4hmdmjrzjltetgdr3lx/spack-src/BLACS/SRC/igsum2d_.c:154:7: error: call to undeclared function 'BI_imvcopy'; ISO C99 and later do not support implicit function declarations [-Wimplicit-function-declaration]
BI_imvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
^
2022-10-28 10:13:51 -06:00
Lucas Nesi
b89f6226f8
starpu: add papi and blocking variants ( #33580 )
2022-10-28 16:43:45 +02:00
Vasileios Karakasis
c772b662c9
ReFrame: add versions up to v3.12.0 ( #33446 )
...
Also adds 4.0 dev versions
2022-10-28 16:38:29 +02:00
Harmen Stoppels
fa0432c521
gitlab ci: patched make 4.3.0 ( #33583 )
2022-10-28 14:38:57 +02:00
Harmen Stoppels
21e826f256
patchelf: add v0.16.1 ( #33579 )
2022-10-28 11:15:06 +02:00
eugeneswalker
0896bf928b
openblas %oneapi: extend application of --Wno-error=implicit-function-declaration ( #33576 )
2022-10-28 02:05:59 -06:00
Chris White
d4a0f588e9
CachedCMakePackage: Add back initconfig as a defined phase ( #33575 )
...
Also: add type annotation to indicate that "phases" is always a
tuple of strings.
2022-10-27 23:04:18 -07:00
Adam J. Stewart
b81b54a74c
py-scikit-learn: add v1.1.3 ( #33534 )
2022-10-27 19:49:43 -06:00
Diego Alvarez
3ad0952956
nextflow: add 22.10.1 ( #33574 )
...
* Add nextflow 22.10.1
* Add trailing comma (style)
2022-10-27 16:41:49 -06:00
Adam J. Stewart
bd51751a8c
GDAL: multi-build system support ( #33566 )
2022-10-27 16:10:12 -06:00
rfbgo
67585fe13e
Add vasp variant to control shmem compile options ( #33531 )
...
Currently the vasp package always enables the use of shmem to reduce algorithm memory usage (see
https://www.vasp.at/wiki/index.php/Precompiler_options ). This is great,but on some systems gives compile errors with the interoperability of C and Fortran. This PR makes that shmem flag optional, but retains the
existing default on behavior.
2022-10-27 14:59:06 -07:00
Robert Cohn
3e966f2547
support pkgconfig for mkl ( #33382 )
2022-10-27 15:01:59 -06:00
SoniaScard
600948558d
ophidia-analytics-framework: new package at v1.7 ( #33567 )
...
* ophidia-analytics-framework: new package at v1.7
* Fix code style in ophidia-analytics-framework
Co-authored-by: SoniaScard <SoniaScard@users.noreply.github.com>
Co-authored-by: Donatello Elia <eldoo@users.noreply.github.com>
2022-10-27 13:42:58 -07:00
Adam J. Stewart
a8c0a662a1
py-torchdata: add v0.5.0 ( #33568 )
2022-10-27 15:02:46 -05:00
Brian Van Essen
6408b51def
Support ROCm backing in DiHydrogen ( #33563 )
...
* Added support for building the DiHydrogen package and LBANN extensions
to DiHydrogen with ROCm libraries.
Fixed a bug on Cray systems where CMake didn't try hard enough to find
an MPI-compatible compiler wrapper. Make it look more.
Added support for the roctracer package when using ROCm libraries.
* Fixed how ROCm support is defined for pre-v0.3 versions.
2022-10-27 21:19:56 +02:00
Stephen McDowell
4be67facdc
ECP-SDK: enable hdf5-vfd-gds when +cuda ( #33300 )
...
- hdf5-vfd-gds:
- Add new version 1.0.2 compatible with hdf5@1.13 .
- CMake is a build dependency.
- Set `HDF5_PLUGIN_PATH` in the runtime environment, this plugin
is loaded dynamically.
- SDK:
- The VFD GDS driver only has utility when CUDA is enabled.
- Require hdf5-vfd-gds@1.0.2+ (1.0.1 and earlier do not compile).
2022-10-27 13:51:19 -05:00
Carson Woods
13636a2094
Add new versions to wi4mpi ( #33569 )
2022-10-27 11:32:20 -07:00
Massimiliano Culpo
ec50906943
Update macOS Python version in CI to 3.10 ( #33560 )
2022-10-27 20:25:26 +02:00
Ben Boeckel
ea1719d986
Paraview catalyst support ( #33369 )
...
* paraview: add support for Catalyst 1 APIs
* paraview: add support for libcatalyst impl support
2022-10-27 12:18:16 -06:00
Miroslav Stoyanov
6f4d69cf8d
new version and rocm fix ( #33536 )
2022-10-27 10:18:44 -07:00
Luke Diorio-Toth
57226a870b
py-ncbi-genome-download: new package ( #33511 )
...
* py-ncbi-genome-download: new package
* fixed style
2022-10-27 11:51:36 -05:00
Satish Balay
34d55af55d
phist: add v1.11.2 ( #33561 )
2022-10-27 11:44:51 -05:00
Brian Van Essen
5f99d3dfaa
spdlog: allow using vendored fmt library ( #33379 )
2022-10-27 11:13:07 -05:00
Lucas Nesi
86337f042e
chameleon: correct chameleon+simgrid build ( #33559 )
...
* chameleon: correct chameleon+simgrid build
* chameleon: remove unused declarations
2022-10-27 08:59:06 -07:00
SoniaScard
2960d8ac0a
ophidia-io-server: new package at v1.7 ( #33436 )
...
Co-authored-by: SoniaScard <SoniaScard@users.noreply.github.com>
2022-10-27 17:52:49 +02:00
psakievich
b9bee70a97
curl: stop auto generating file named str ( #33532 )
...
Calling `determine_variants` from the `curl` package autogenerates an empty file every time it is called.
2022-10-27 17:33:51 +02:00
ryandanehy
5a939d9c94
exago, hiop: propagate build type ( #32750 )
2022-10-27 17:14:09 +02:00
Satish Balay
6cb4a00280
petsc+kokkos: pass in cuda_arch, rocm_arch to kokkos ( #33530 )
...
Also remove dependency on kokkos+wrapper
2022-10-27 17:02:36 +02:00
Lucas Nesi
ecdfe02355
starpu: correct fxt dependency variant when simgrid ( #33558 )
2022-10-27 09:02:09 -06:00
Massimiliano Culpo
b19549ce9d
suite-sparse: add versions up to v5.13.0 ( #33550 )
2022-10-27 17:01:50 +02:00
G-Ragghianti
590c4e35ca
Package slate: added requirements for cuda_arch ( #33554 )
2022-10-27 08:54:16 -06:00
Lucas Nesi
41d53b85f8
simgrid: add v3.32 ( #33557 )
2022-10-27 08:46:54 -06:00
Mosè Giordano
07d9c254a2
intel-mpi: add cpio as build dependency ( #33555 )
2022-10-27 08:26:06 -06:00
Massimiliano Culpo
9a51d42cec
oce: rework recipe to prefer old intel-tbb ( #33553 )
2022-10-27 15:34:47 +02:00
Satish Balay
883b7cfa29
hiop: add version 0.7.1 ( #33543 )
2022-10-27 15:00:15 +02:00
Massimiliano Culpo
605411a9fb
LuaPackage: add missing attribute ( #33551 )
...
fixes #33544
2022-10-27 06:17:54 -06:00
Harmen Stoppels
df1d233573
Don't fail over cpuinfo ( #33546 )
2022-10-27 11:14:09 +02:00
Marco De La Pierre
a82a9cf3c1
tower-agent and tower-cli: update versions ( #33545 )
2022-10-27 11:10:22 +02:00
Massimiliano Culpo
f89be5d7e4
Fix bootstrapping from sources in CI ( #33538 )
...
Since #32262 we are not testing bootstrapping from sources, since
we didn't update the mirrors in tests
2022-10-27 07:40:10 +02:00
iarspider
9d7c688d3c
cppunit: add static/shared variant, add version 1.15_20220904 ( #33522 )
2022-10-26 17:04:29 -07:00
Wouter Deconinck
8fc3e49e00
opencascade: new version 7.6.3 ( #33518 )
...
* opencascade: new version 7.6.3
* opencascade: correct hash for 7.6.3
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2022-10-26 17:41:56 -06:00
