hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
4009 commits 3 branches 52 tags 188 MiB
Commit graph

2036 commits

Author SHA1 Message Date
Erik Schnetter
2ac2985cf2 Require Python for PETSc 
PETSc requires Python for building.

I have a case where an HPC system has a very old default Python version, too old for Spack. So I load a module for Python, which makes Spack work. This module relies on LD_LIBRARY_PATH.

When building PETSc, Spack unsets LD_LIBRARY_PATH, breaking the Python that PETSc finds.

Explicitly requiring Python for PETSc makes building PETSc work.
 2016-01-08 22:24:42 -05:00
Erik Schnetter
e628896c2b parmetis requires cmake @2.8: 2016-01-08 22:12:19 -05:00
Erik Schnetter
da8fd5b30a Require cmake @2.8: for metis 2016-01-08 21:56:08 -05:00
Erik Schnetter
04f908a957 Require cmake @2.8: 2016-01-08 21:41:35 -05:00
Erik Schnetter
8da1dd2b45 Require cmake 2016-01-08 21:32:17 -05:00
Gregory Becker
6e5238d037 Fixing the fix and removing debug printing 2016-01-08 17:44:16 -08:00
Gregory Becker
2b2d4bae4e Fixing multimethod test for new platforms 2016-01-08 17:38:37 -08:00
Gregory Becker
2b4dd8b9af Fixed target satisfaction and updated tests accordingly 2016-01-08 16:30:27 -08:00
Gregory Becker
6ca1e5c4b0 Revert "added a bunch of packages and added submodule" 
This reverts commit 79808da760.
 2016-01-08 15:02:29 -08:00
Gregory Becker
86230b9ac8 Revert "make sure submodule is added in the correct location" 
This reverts commit e9f7d033ff.
 2016-01-08 15:01:46 -08:00
Erik Schnetter
6214148d35 Use .tar.gz instead of .tar.xz for backward compatibility 2016-01-08 17:16:30 -05:00
Gregory Becker
a9e9f9afb0 Revert "removed package for python packages with problematic / duplicate names" 
This reverts commit f3254ff02d.
 2016-01-08 14:14:26 -08:00
Gregory Becker
1b0d064743 Revert "clean up package.py file and remove duplicate file" 
This reverts commit c809cc9273.
 2016-01-08 14:13:33 -08:00
Gregory Becker
d2da41b0bd More file permissions chasing 2016-01-08 12:12:03 -08:00
Gregory Becker
49908386ef changing problematic package.py file permissions back to 0644 2016-01-08 11:48:59 -08:00
Gregory L. Lee
7ad3e2b56b new python packages 2016-01-08 11:09:11 -08:00
Gregory Becker
6ccd9d6fa4 Cleaned up naming conventions for architecture, split into platform and target 2016-01-07 11:49:01 -08:00
Gregory L. Lee
175f20a9dc new and updated python packages 2016-01-07 11:12:47 -08:00
Erik Schnetter
1646bec1a4 Make PETSc build with OpenMPI 2016-01-07 13:54:47 -05:00
Todd Gamblin
dd04b6a873 Merge pull request #278 from eschnett/eschnett/hdf5-variants 
Enable several variants for HDF5
 2016-01-06 23:50:40 -08:00
Todd Gamblin
a651572cfd Merge pull request #307 from eschnett/eschnett/atop 
New package atop
 2016-01-06 23:40:03 -08:00
Ben Boeckel
e790146627 paraview: add some extra arguments on OS X 
X shouldn't be used on OS X and spack expects a Unix-style install, not
a .app bundle.
 2016-01-06 12:05:05 -05:00
Erik Schnetter
fd7c1fe584 Avoid using tabs 2016-01-06 10:10:15 -05:00
Todd Gamblin
84c7e457e9 Merge pull request #302 from eschnett/eschnett/correct-boost 
Correct `join_path` in package boost
 2016-01-06 04:34:44 -08:00
Todd Gamblin
a65fa54514 Merge pull request #270 from eschnett/eschnett/openssl-darwin 
Make OpenSSL build on Darwin
 2016-01-06 04:07:16 -08:00
alalazo
7670dc7efc glpk : added support for gmp 2016-01-06 10:05:48 +01:00
alalazo
24ba60168d added package : glpk 2016-01-06 09:49:10 +01:00
Erik Schnetter
cfe54b201d New package atop 2016-01-05 20:09:22 -05:00
Erik Schnetter
60d8413940 Support mbedtls, an alternative SSL library 2016-01-05 19:21:57 -05:00
Mike Nolta
2b801e2086 new package: py-astropy 2016-01-05 15:41:18 -05:00
Erik Schnetter
c18dfa058a Add details to comment 2016-01-05 14:09:54 -05:00
Erik Schnetter
12632f16b8 Combine with other OpenSSL Darwin patch 
Set KERNEL_BITS.
Don't use Darwin-specific configure script.
 2016-01-05 13:17:17 -05:00
Erik Schnetter
25934200de Merge branch 'develop' into eschnett/openssl-darwin 2016-01-05 13:09:57 -05:00
Erik Schnetter
24ced90913 Correct join_path in package boost 2016-01-05 09:40:30 -05:00
Todd Gamblin
20e8b67eb6 Merge pull request #297 from eschnett/eschnett/boost-darwin 
Support Darwin for Boost
 2016-01-05 00:42:31 -08:00
Gregory Becker
ff82e41404 Merge branch 'externals' into crayport 2016-01-04 10:46:25 -08:00
Erik Schnetter
96e5905bce Build multiple FFTW variants simultaneously 
FFTW can build only one floating point precision (float, double, long double, quad) at once, but they can all be installed simultaneously as the libraries have different names. It is common packages to decide only at run time which precision FFTW they need, and thus FFTW should offer all precisions at once.
 2016-01-04 12:14:42 -05:00
Tom Scogland
133fda11f2 Merge remote branch 'origin/llvm-rework' into llvm-rework 2016-01-03 17:22:57 -08:00
Tom Scogland
884f317d50 tweak gold support, added to gcc 
The gold linker support and gold plugin variants now use the same name.
Trying to apply use-flag-style discipline here despite the fact gold has
other implications for clang, this way globally enabling gold will have
a more consistent effect if that becomes possible.  The gold support in
gcc could use more testing to ensure it works consistently, but as long
as a binutils including gold is used the gcc configure tends to pick it
up, and it seems to work with 5.3.0 at least.
 2016-01-03 17:22:13 -08:00
Tom Scogland
31803d10aa bringing back configuration and build stages 2016-01-02 11:59:33 -08:00
Tom Scogland
356836ccbb removed extraneous comment lines 2016-01-01 22:30:02 -08:00
Erik Schnetter
03537a6be4 Support Darwin for Boost 
Ensure that builds on Darwin use the "darwin" toolset.
Also update Boost to 1.60.0.
 2016-01-01 17:38:42 -05:00
Erik Schnetter
f5a49280c3 Enable C++ and Fortran languages by default 2016-01-01 17:26:49 -05:00
Todd Gamblin
3c64c18bfc Merge pull request #274 from eschnett/eschnett/julia 
Add package for Julia
 2015-12-31 15:46:52 -08:00
Todd Gamblin
48ebb25c25 Merge pull request #271 from eschnett/eschnett/pcre2 
New package PCRE2
 2015-12-31 15:40:03 -08:00
Todd Gamblin
7062b216b8 Merge pull request #258 from epfl-scitas/packages/scalasca 
Packages/scalasca
 2015-12-31 15:27:39 -08:00
Tom Scogland
48f19b5fde add the gold linker to binutils 2015-12-30 16:59:39 -08:00
Tom Scogland
5d89fb8dfa ensure that clang-query gets installed 2015-12-30 16:59:39 -08:00
Tom Scogland
4ae98f8b21 significant llvm update 
This update significantly reworks the llvm and clang packages.  The llvm
package now includes variants allowing it to build and install any and
all of:

* clang
* lldb
* llvm's libunwind (why, WHY did they name it this?!?)
* polly (including building it directly into the clang tools, 3.7.0 only)
* clang extra tools
* compiler-rt (sanitizers)
* clang lto (the gold linker plugin that allows same to work)
* libcxx/libcxxabi
* libopenmp, also setting the default openmp runtime to same, when
  parameters happen this shoudl be an option of libomp or libgomp

Ideally, this should have rpath setup like the gcc package does, but
clang's driver has no support for specs as such, and no clearly
equivalent mechanism either.  If anyone has ideas on this, they would be
welcome.

One significant note related to gcc though, if you test this on LLNL
systems, or anywhere that has multiple GCCs straddling the dwarf2
boundary and sharing a libstdc++, build a gcc with spack and use that to
build clang.  If you use a gcc4.8+  to build this with an older
libstdc++ it will fail on missing unwind symbols because of the
discrepancy.

Resource handling has been changed slightly to move the unpacked archive
into the target rather than use symlinks, because symlinks break certain
kinds of relative paths, and orders resource staging such that nested
resources are unpacked after outer ones.
 2015-12-30 16:59:39 -08:00
Tom Scogland
01f811d546 legacy mysql bindings for python 2015-12-30 11:18:13 -08:00
Tom Scogland
31f674da3c python libraries, libedit, and ninja 
A pile of libraries and tools, libedit is actually important as a
replacement of readline for non-GPL projects.  Also ninja may be
worthwhile for some of the larger CMake projects, like llvm/clang.
 2015-12-30 11:13:09 -08:00
Todd Gamblin
3e3667f254 Revert "removing check as it can cause failures in zsh" 
This reverts commit 496e485691.

Undo overly large set of changes -- LLVM wasn't ready.  Tom can
recommit just the zsh stuff.
 2015-12-30 10:20:27 -08:00
Tom Scogland
496e485691 removing check as it can cause failures in zsh 2015-12-30 10:13:46 -08:00
Todd Gamblin
ff0d871612 Remove mock_configs; tests no longer modify spack home directory. 2015-12-27 21:13:18 -08:00
Todd Gamblin
c65fd3a289 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots 
Conflicts:
	lib/spack/spack/cmd/create.py
	lib/spack/spack/cmd/extensions.py
	lib/spack/spack/cmd/fetch.py
	lib/spack/spack/cmd/uninstall.py
	lib/spack/spack/config.py
	lib/spack/spack/database.py
	lib/spack/spack/directory_layout.py
	lib/spack/spack/packages.py
	lib/spack/spack/spec.py
 2015-12-25 16:35:55 -08:00
Erik Schnetter
be12720eb7 Use filter_file instead of calling perl 2015-12-25 14:02:56 -05:00
Erik Schnetter
01f7e768f6 Enable several variants for HDF5 
+cxx, +fortran: Enable support for the respective languages
+threadsafe: Enable multi-threading
 2015-12-23 22:49:42 -05:00
Erik Schnetter
51f546fe92 Add comments to package file 2015-12-23 18:21:41 -05:00
Erik Schnetter
309877088d Build Julia 2015-12-23 18:21:40 -05:00
Erik Schnetter
a58dd8f6ab Remove leftover debug statement 2015-12-23 18:19:26 -05:00
alalazo
21dae4577a R : updated package 2015-12-23 10:20:13 +01:00
Erik Schnetter
60ec79eac3 New package PCRE2 
This is a major update of the package PCRE. It seems both PCRE and PCRE2 can be installed at the same time; their APIs are different.
 2015-12-22 18:53:43 -05:00
Erik Schnetter
a540a68561 Make OpenSSL build on Darwin 2015-12-22 18:51:49 -05:00
Todd Gamblin
d1d23ec5e6 Merge pull request #257 from eschnett/eschnett/hwloc-1.11.2 
Update hwloc; don't require libpciaccess on OS X
 2015-12-22 15:18:39 -08:00
Erik Schnetter
552d8ca5f0 Update rsync to 3.1.2 2015-12-22 16:40:09 -05:00
Erik Schnetter
6831ee6f0a Skip installing libpciaccess on Darwin 2015-12-22 16:24:05 -05:00
Erik Schnetter
6dc1fc03c1 Update hwloc; don't require libpciaccess on OS X 
- hwloc 1.11.2 is available.
- libpciaccess is not supported on OS X; don't require it there.
 2015-12-22 15:50:46 -05:00
Todd Gamblin
100ada0ed6 Merge pull request #266 from LLNL/bugfix/python3-setuptools-conflict 
fix conflict with setuptools and cached pyc files
 2015-12-22 09:19:57 -08:00
Gregory L. Lee
41fd380d1b fixed site pyc regular expression 2015-12-22 09:15:47 -08:00
Todd Gamblin
b1d40efd99 Merge pull request #261 from LLNL/features/prefer-versions-in-packages 
Add ability to prefer particular versions in packages.
 2015-12-22 08:25:52 -08:00
Gregory L. Lee
3db1c1761e only ignore cached site.py file 2015-12-22 08:03:17 -08:00
Todd Gamblin
5bcec9289e Merge pull request #263 from nolta/hdf5-mpi 
fix non-mpi hdf5 package build
 2015-12-22 07:57:11 -08:00
Gregory L. Lee
d85a46380c fix conflict with setuptools and cached pyc files 2015-12-22 06:50:18 -08:00
alalazo
fc43f3c730 valgrind : added package 2015-12-22 10:11:18 +01:00
Mike Nolta
bfc72c04fb fix non-mpi hdf5 package build 
Fixes a couple of issues in c5b7eba457.
 2015-12-21 18:59:01 -05:00
Todd Gamblin
fe0fdf60b4 Add ability to prefer particular versions in packages. 
- Adding `preferred=True` to a version directive will change its sort
  order in concretization.

- This provides us a rudimentary ability to keep the Spack stack
  stable as new versions are added.

- Having multiple stacks will come next, but this at least allows us
  to specify default versions of things instead of always taking the
  newest.
 2015-12-21 15:35:47 -08:00
Gregory L. Lee
c3aaf005e2 new python versions 2015-12-21 15:14:59 -08:00
Gregory L. Lee
f9326053b9 remove numpy compiler patch 2015-12-21 13:56:19 -08:00
Todd Gamblin
73ea15db8e Merge pull request #208 from epfl-scitas/features/resource_directive 
resource directive : implementation + clang / llvm use case
 2015-12-21 10:34:16 -08:00
Todd Gamblin
d5e9279c1d Merge pull request #215 from sjtbham/develop 
fix build to work against depends for modules created by setup.py and…
 2015-12-21 09:24:16 -08:00
alalazo
a411c497ab scalasca + dependencies : simplified build after #255 2015-12-21 16:10:55 +01:00
alalazo
0a191d6b09 scalasca : updated package build (depends on scorep, does not build twice). 2015-12-21 15:02:48 +01:00
Todd Gamblin
bb329d8a5c Merge pull request #231 from epfl-scitas/packages/scotch 
scotch: adding dependencies + variants for mpi, shared, compression and esmumps
 2015-12-20 14:29:19 -08:00
Todd Gamblin
d6edaa0970 Merge pull request #251 from epfl-scitas/packages/tau 
Improved build of tau and related dependencies
 2015-12-20 14:26:40 -08:00
alalazo
14c9c61275 tau : scorep is now a variant 2015-12-20 17:38:35 +01:00
Nicolas Richart
27d52badb1 removing completely the write_make_inc function 2015-12-20 13:38:22 +01:00
Nicolas Richart
614c4d1876 moving write_make_inc into a patch function 2015-12-20 13:27:43 +01:00
Todd Gamblin
37db5928b7 Merge pull request #109 from justintoo/add-package-spot 
(Package) Add Spot C++ library (v1.99.3)
 2015-12-19 21:06:22 -08:00
Todd Gamblin
22a4eb6b27 Merge pull request #226 from epfl-scitas/packages/mpiches 
mpich, mvapich2: changes the filter for the wrappers mpi{cc, cxx, f77, fc}
 2015-12-19 21:04:08 -08:00
Todd Gamblin
1b086c928c Merge pull request #227 from trws/fetch-deps 
fetch: add options to fetch missing or all deps
 2015-12-19 21:02:42 -08:00
Todd Gamblin
3d3bea618e Fix empty format strings in some packages. 2015-12-19 20:08:14 -08:00
Mike Nolta
e403576cf9 new package: cfitsio 2015-12-19 18:38:23 -05:00
Gregory L. Lee
8dd1f3ffa5 added mrnet 5.0.1 2015-12-19 07:43:34 -08:00
alalazo
f3837dd686 tau : removed direct otf2 support 2015-12-18 16:15:30 +01:00
alalazo
dfbf1b2205 Merge branch 'develop' of https://github.com/alalazo/spack into packages/tau 2015-12-18 13:00:43 +01:00
alalazo
8dc32aeedb Improved tau build and added optional dependencies 2015-12-18 12:58:29 +01:00
Todd Gamblin
3198522a7f Merge pull request #236 from nolta/cmake-enable-ssl 
cmake: enable ssl, for https downloads
 2015-12-17 23:03:31 -08:00
David Beckingsale
f91e1ae83f Added Lmod package 2015-12-17 15:26:47 -08:00
Todd Gamblin
4d982f5aca Merge pull request #86 from jgalarowicz/develop 
Add support for Krell Institute related products.
 2015-12-17 12:35:30 -08:00
Jim Galarowicz
c02cbaecd8 Change back the previous boost change and change the mrnet variant name to lwthreads. 2015-12-17 07:41:49 -08:00
Todd Gamblin
85c02dbe7b Merge pull request #167 from mathstuf/hdf5-fix-mpi-dependency 
Hdf5 fix mpi dependency
 2015-12-16 12:03:22 -08:00
Todd Gamblin
9ac4c730fb Merge pull request #241 from epfl-scitas/packages/gnuplot 
gnuplot : added package
 2015-12-16 11:37:26 -08:00
alalazo
cc9266e56c gsl : added package 2015-12-16 12:45:58 +01:00
Massimiliano Culpo
d5018e77a3 gnuplot : modifications to build on RHLE 6 2015-12-16 09:32:48 +01:00
Mike Nolta
917fb328bb cmake: enable ssl, for https downloads 
By default cmake builds its own curl, without SSL support. This
patch enables SSL when building cmake, fixing the following error:

  error: downloading 'https://...' failed

    status_code: 1
    status_string: "Unsupported protocol"
    log: Protocol "https" not supported or disabled in libcurl
 2015-12-15 12:39:30 -05:00
alalazo
0a0cd4b9d3 gnuplot : added package 2015-12-15 16:29:36 +01:00
Nicolas Richart
ed7db8e489 adding external dependencies + variants for mpi, shared and compression 2015-12-14 21:59:40 +01:00
alalazo
1bfb16592b fftw : added package 2015-12-14 16:31:02 +01:00
Jim Galarowicz
8df4fd9e94 Fix build of krell tools to use spack with minimal impact on rest of spack packages. 2015-12-13 17:13:34 -08:00
Jim Galarowicz
0fc83ba999 Fix merge conflict with papi package. 2015-12-11 17:23:54 -08:00
Ben Boeckel
6f978af77b hdf5: update dependents to declare MPI support 2015-12-10 11:53:40 -05:00
Ben Boeckel
79a641ccf1 paraview: update hdf5 comment 2015-12-10 11:51:54 -05:00
Ben Boeckel
c5b7eba457 hdf5: make mpi support optional 2015-12-10 11:51:54 -05:00
Tom Scogland
786f4cd2c2 add dependency fetching to mirror creation 2015-12-10 08:32:51 -08:00
Gregory L. Lee
3163d016db install python files to libxml2 prefix instead of python prefix and ignore non-python files when activating 2015-12-09 14:10:05 -08:00
Nicolas Richart
0daa08416a corrected filter_compilers + added it for mvapich2 2015-12-09 20:00:54 +01:00
Todd Gamblin
f6eb000381 Merge pull request #225 from epfl-scitas/packages/git 
Adding https support in git even if system lib are missing
 2015-12-09 10:59:47 -08:00
alalazo
20e67bc5e6 clang : solve the issue with missing default include paths for OpenMP and libc++ 
resource : support for finer grained linking of resources
 2015-12-09 17:15:26 +01:00
Nicolas Richart
31863c68d8 Adding curl and expat support to git for https repos 2015-12-09 11:00:33 +01:00
Todd Gamblin
e46af913be Merge pull request #148 from PaulDapolito/glib-dep 
added zlib dependency to glib package specification
 2015-12-09 01:44:00 -08:00
Todd Gamblin
8ebac18f50 Merge pull request #224 from epfl-scitas/packages/gdb 
gdb : added package
 2015-12-09 01:35:04 -08:00
Todd Gamblin
c41b9b7ddc Change github.com/scalability-llnl to github.com/llnl everywhere. 2015-12-09 01:24:15 -08:00
alalazo
4d5eb4ce7d gdb : added package 2015-12-09 09:06:10 +01:00
alalazo
c5b9732aed Should fix #177 
gcc : changed objdir to something out of srcdir and added '--with-sysroot=/'
binutils : added '--with-sysroot=/'
 2015-12-08 14:06:04 +01:00
Todd Gamblin
e7ab8d476d Merge pull request #219 from eschnett/eschnett/gmp 
Update gmp to 6.1.0
 2015-12-07 16:46:44 -08:00
Todd Gamblin
6bc86a6baa Merge pull request #220 from eschnett/eschnett/mpc 
Update mpc to 1.0.3
 2015-12-07 16:46:32 -08:00
Todd Gamblin
b0434fa486 Merge pull request #221 from davidbeckingsale/features/cleverleaf-boost 
Update CleverLeaf package to use Boost and fix SAMRAI MPI usage
 2015-12-07 16:46:15 -08:00
Matthew LeGendre
f8e046bb33 Fix issue with gcc 5.x not building on RHEL6 2015-12-07 15:49:47 -08:00
Gregory L. Lee
1a22a507d6 mesa requires +python variant of libxml2 2015-12-07 15:36:36 -08:00
David Beckingsale
36272c8136 Fix MPI selection in SAMRAI and remove narrow dependency specification 2015-12-07 14:58:16 -08:00
David Beckingsale
77bf133cd2 Update CleverLeaf package to use Boost and fix SAMRAI MPI usage 2015-12-07 14:33:31 -08:00
Erik Schnetter
aff95ee587 Update mpc to 1.0.3 2015-12-05 11:23:40 -05:00
Erik Schnetter
29537b9991 Update gmp to 6.1.0 2015-12-05 11:21:47 -05:00
Gregory L. Lee
5891847ae4 added py-pillow and updated py-basemap to depend on it 2015-12-03 15:35:28 -08:00
Gregory L. Lee
a56c7e5f1a Merge branch 'develop' of https://github.com/scalability-llnl/spack into develop 2015-12-03 15:02:49 -08:00
Gregory L. Lee
0f4efc018d updated package versions 2015-12-03 15:01:44 -08:00
Nicolas Richart
1a132e4fdb Missing declaration of the debug variant 2015-12-02 16:18:29 +01:00
Simon Thompson
aa137d8be0 fix build to work against depends for modules created by setup.py and add python3 support 2015-12-02 14:20:11 +00:00
Nicolas Richart
4bb6f23ae1 Adding variant for mpi and python + compression for iostream 2015-12-02 13:26:00 +01:00
Massimiliano Culpo
39a3cfd4d9 reource directive accepts 'basename' keyword 
llvm : libc++ variant
 2015-12-02 12:24:37 +01:00
Mario Melara
0544b164fc Updated script of mini-xml for adios package 2015-12-01 11:59:49 -08:00
Mario Melara
4e0d47f1dd building with GCC needs special variables added. Intel compilers build just fine 2015-12-01 11:59:19 -08:00
Massimiliano Culpo
a173ab1e31 clang : default OpenMP is libomp 2015-12-01 12:16:08 +01:00
Kevin Huck
cd1207329b Updating the OMPT hash again... 2015-11-30 10:32:07 -08:00
Kevin Huck
d5c7cd5e50 Had to force a patch to the OMPT support, so the hash for v0.1 has 
changed.
 2015-11-30 09:48:15 -08:00
Tom Scogland
b253308eee returning flux to a building state for web release 
Flux package reworked to include all new dependencies, fixed issues with a
clean-build of hwloc, lua and czmq as well that prevented flux from building
cold on a minimal system.
 2015-11-29 19:22:31 -08:00
Todd Gamblin
7383bd393e Fixed bug #42: problem with satisfies() for virtual dependencies. 
- _cross_provider_maps() had suffered some bit rot (map returned was
  ill-formed but still worked for cases with one vdep)

- ProviderIndex.satisfies() was only checking whether the result map
  was non-empty.  It should check whether all common vdeps are *in*
  the result map, as that indicates there is *some* way to satisfy
  *all* of them.  We were checking whether there was some way to
  satisfy *any one* of them, which is wrong.

- Above would cause a problem when there is more than one vdep provider.

- Added test that covers this case.

- Added `constrained()` method to Spec. Analogous to `normalized()`:
  `constrain():constrained() :: normalize():normalized()`
 2015-11-27 23:06:18 -08:00
Todd Gamblin
89d5127900 New, cleaner package repository structure. 
Package repositories now look like this:

    top-level-dir/
        repo.yaml
        packages/
            libelf/
                package.py
            mpich/
                package.py
            ...

This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
 2015-11-26 14:19:27 -08:00
Massimiliano Culpo
1fe626ec7c resource directive : sketch of implementation + clang / llvm use case 2015-11-26 17:53:33 +01:00
Tom Scogland
f8ffb005c8 make cram an extension of python 2015-11-25 15:10:18 -08:00
Todd Gamblin
c526c71f56 Merge pull request #201 from alfredo-gimenez/develop 
Fixed Mitos dependency and added new version
 2015-11-24 16:12:12 -08:00
Alfredo Gimenez
a0d388875e Fixed Mitos dependency and added new version 2015-11-24 15:12:31 -08:00
Tom Scogland
a1553dd12b adding google sparsehash and cityhash libraries 2015-11-24 09:23:36 -08:00
Todd Gamblin
e2412e3f21 Merge branch 'eschnett-openblas' into develop 2015-11-24 00:52:48 -08:00
Todd Gamblin
52cce2d710 Revert "WIP: openssl: set KERNEL_BITS to make ./config work" 2015-11-24 00:30:08 -08:00
Erik Schnetter
1d90d98e40 Remove commented-out code 2015-11-23 20:32:06 -05:00
Kevin Huck
4dd47fbc78 cleaning up commits for merge request 2015-11-23 16:16:52 -08:00
Todd Gamblin
98ccad8105 Merge pull request #189 from mathstuf/openssl-use-64-bits 
WIP: openssl: set KERNEL_BITS to make ./config work
 2015-11-23 16:09:28 -08:00
Todd Gamblin
de2213a621 Merge pull request #188 from mathstuf/python-osx 
python: target OS X 10.6
 2015-11-23 16:08:56 -08:00
Todd Gamblin
583b8e3ade Merge pull request #187 from mathstuf/dbus-osx-disable-launchd 
dbus: disable launchd support
 2015-11-23 16:08:35 -08:00
Todd Gamblin
b5fffc71c9 Merge pull request #168 from mathstuf/libxml2-drop-python-dep 
Libxml2 drop python dep
 2015-11-23 16:08:24 -08:00
Todd Gamblin
0011903e23 Merge pull request #165 from mathstuf/paraview-update-deps 
Paraview update deps
 2015-11-23 16:04:03 -08:00
Todd Gamblin
9bc27561ec Merge pull request #164 from mathstuf/matplotlib-optional-deps 
Matplotlib optional deps
 2015-11-23 16:03:31 -08:00
Todd Gamblin
76100a6f08 Merge pull request #158 from davidbeckingsale/features/cleverleaf 
Add CleverLeaf package
 2015-11-23 16:00:39 -08:00
David Beckingsale
38b83362b6 Updated url and description 2015-11-23 15:58:33 -08:00
Todd Gamblin
c13329c25a Merge pull request #155 from epfl-scitas/packages/mvapich2 
packages/mvapich2 : added support for process managers and network types
 2015-11-23 15:53:53 -08:00
Todd Gamblin
6798c177c6 Merge pull request #157 from alfredo-gimenez/develop 
Added Python Twisted library
 2015-11-23 15:51:57 -08:00
Todd Gamblin
8fbd79fa2e Merge pull request #198 from eschnett/update-papi 
Update PAPI
 2015-11-23 15:42:09 -08:00
Mario Melara
8f56f5cfcc Added path to netcdf and hdf5 using the env vars NETCDF_DIR and HDF5_DIR. 2015-11-23 14:02:59 -08:00
Erik Schnetter
60fd7e2268 Update PAPI 2015-11-23 16:50:11 -05:00
Erik Schnetter
cb21a5b309 Add OpenBLAS 2015-11-23 16:48:06 -05:00
Erik Schnetter
1330c10fc8 Don't use https for downloading 2015-11-23 16:00:10 -05:00
Todd Gamblin
be92d0b6a4 Merge pull request #194 from trws/judy 
add judy dynamic array/meta-trie/hash table lib
 2015-11-23 10:10:46 -08:00
Todd Gamblin
7392e1af59 Merge pull request #190 from bhatele/feature/networktools 
Add damselfly package
 2015-11-23 10:10:12 -08:00
Tom Scogland
34700d560f add judy dynamic array/meta-trie/hash table lib 
Just adding judy.
 2015-11-20 12:15:32 -08:00
Abhinav Bhatele
4edcc59c3d Add damselfly package 2015-11-19 23:05:21 -08:00
Ben Boeckel
c023b1000e python: target OS X 10.6 
Targeting anything older lacks rpath stuff which configure uses.
 2015-11-19 17:52:59 -05:00
Ben Boeckel
150e43f3fd WIP: openssl: set KERNEL_BITS to make ./config work 
Why OpenSSL refuses to build without this (it explicitly warns about it)
is a mystery.
 2015-11-19 17:51:44 -05:00
Ben Boeckel
b6d368d7a0 dbus: disable launchd support 2015-11-19 17:50:30 -05:00
Todd Gamblin
34e445a480 Merge pull request #176 from truatpasteurdotfr/develop 
jdk: updated to version 8u66
 2015-11-18 15:58:33 -06:00
Todd Gamblin
5086a1e825 Merge pull request #178 from eschnett/develop 
Update HDF5 to 1.8.16
 2015-11-18 15:58:13 -06:00
Todd Gamblin
38ce53bc85 Merge pull request #179 from eschnett/update-hwloc 
Update hwloc to 1.11.1
 2015-11-18 15:58:06 -06:00
Todd Gamblin
89c11221ed Merge pull request #181 from eschnett/update-openmpi 
Update OpenMPI to 1.10.1; correct configure error in OpenMPI
 2015-11-18 15:57:56 -06:00
Todd Gamblin
025566b494 Merge pull request #182 from eschnett/hdf5-mpi 
HDF5: Support non-MPICH MPI implementations
 2015-11-18 15:57:29 -06:00
Todd Gamblin
4f8380959c Merge pull request #183 from eschnett/add-jemalloc 
Add jemalloc package
 2015-11-18 15:56:46 -06:00
Erik Schnetter
2e51e207f9 Update cmake to 3.4.0 2015-11-18 15:17:48 -05:00
Erik Schnetter
cbc552e91e Add jemalloc package 2015-11-18 13:43:49 -05:00
Erik Schnetter
511ffc3b44 HDF5: Support non-MPICH MPI implementations 2015-11-18 13:33:04 -05:00
Erik Schnetter
e36fd7d29f Update OpenMPI to 1.10.1; correct configure error in OpenMPI 2015-11-18 13:13:13 -05:00
Erik Schnetter
af9fe0a038 Update hwloc to 1.11.1 2015-11-18 12:37:54 -05:00
Erik Schnetter
893e05540c Update HDF5 to 1.8.16 2015-11-18 09:55:45 -06:00
Tru Huynh
b2a85bc12e updated to version 8u66 2015-11-18 10:02:22 +01:00
Erik Schnetter
cc49f9b657 Update OpenSSL package 2015-11-17 18:28:20 -05:00
Erik Schnetter
1003b847b6 Remove comment 2015-11-17 17:10:04 -05:00
Erik Schnetter
ad0a1bf70d Add rsync package 2015-11-17 16:47:47 -05:00
Ben Boeckel
b98c25c1fb paraview: update matplotlib and numpy deps 2015-11-16 17:07:28 -05:00
Ben Boeckel
5eb8e1eec8 py-pyside: update docstring 2015-11-16 17:07:27 -05:00
Ben Boeckel
d40897404b py-matplotlib: make the gui and ipython support optional 
ipython, nice as it is, is not required to use matplotlib. The UI bits
are also optional and dragging in Qt and Tcl/Tk for the library
shouldn't be the default.
 2015-11-16 17:07:27 -05:00
Ben Boeckel
485528cffa paraview: configure the python and MPI executables 2015-11-16 17:05:17 -05:00
Ben Boeckel
d3ead7061e paraview: require qt4 
Qt5 has bugs which need at least 5.6.0 for a fix.
 2015-11-16 17:04:35 -05:00
Ben Boeckel
45d981caab paraview: add dependency on libxml2 back 2015-11-16 11:45:27 -05:00
Ben Boeckel
ca01adb503 libxml2: make the python dependency optional 
Also turn it off by default since it is usually not necessary. Anything
needing the Python bindings should declare it explicitly.
 2015-11-16 11:30:35 -05:00
Tom Scogland
8feaefadcf updating lua package to install in correct order 2015-11-13 09:43:03 -08:00
Todd Gamblin
55662eca69 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots 
Conflicts:
	lib/spack/spack/__init__.py
	lib/spack/spack/directives.py
	lib/spack/spack/packages.py
 2015-11-12 15:16:06 -08:00
David Beckingsale
679b617649 Add CleverLeaf package 2015-11-11 12:33:08 -08:00
Gregory Becker
db1b21b9aa reclaimed the = sign. Architectures now specified by +arch= instead. Decided to prepend flag names with + for clarity in spec names and ease of parsing. Also generalized variants, although there is not yet a way to specify a generalized (name=value) variant. 2015-11-10 15:45:22 -08:00
Alfredo Gimenez
666d9e88f5 Added Python Twisted library 2015-11-10 15:37:09 -08:00
Massimiliano Culpo
27c64f7740 mvapich2 : changed method name for consistency. Removed possibly duplicated flags 2015-11-09 16:02:38 +01:00
Massimiliano Culpo
42bc552dd7 mvapich2 : variant strings are associated with a named variable 2015-11-09 16:02:25 +01:00
Massimiliano Culpo
79ed9de4c1 mvapich2 : added variants for different network types 2015-11-09 16:02:12 +01:00
Massimiliano Culpo
0ae05fdf99 mvapich2 : added variants for different process managers 2015-11-09 16:01:56 +01:00
Massimiliano Culpo
4a72bd7919 mvapich2 : fixed typos. Added FIXME 2015-11-09 16:01:27 +01:00
Massimiliano Culpo
076eaba6e3 mvapich2 : fixed some issues with the package. Needs further improvment with respect to network and pm 2015-11-09 16:00:03 +01:00
Jim Galarowicz
0ced060b87 cbtf did not compile with boost 1.59, so reverted to boost 1.50 temporarily until we fix the cbtf/boost compile issues. 2015-11-06 15:15:38 -08:00
Jim Galarowicz
2aa501bf3d Update the checksum value for the new tarball 2015-11-06 14:19:00 -08:00
Jim Galarowicz
046b348bd3 Merge remote-tracking branch 'upstream/develop' into develop 
Get up to date with rest of develop repository.
 2015-11-06 11:55:49 -08:00
Jim Galarowicz
aa9b14aff4 Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:55:20 -08:00
Jim Galarowicz
7e6b7795f1 Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:53:53 -08:00
Jim Galarowicz
d6a2ab08ac Match up with the new binutils package file. It does what OSS needs w.r.t. libiberty. 2015-11-06 11:47:00 -08:00
Mario Melara
e0498ce54a mxml is adios's package dependency 2015-11-05 13:43:11 -08:00
Mario Melara
0fcb368f47 Adding adios package to spack's package list 2015-11-05 13:42:50 -08:00
Todd Gamblin
9474b8cdac Merge pull request #153 from ktkirk/libxml2 
Was getting system python over spack python
 2015-11-05 10:12:55 -08:00
Gregory Lee
886861c9f4 Merge pull request #151 from scalability-llnl/features/bzip2-mac 
Modified bzip2 package to work properly on macs.
 2015-11-05 09:29:47 -08:00
David Beckingsale
19876161c7 Update ZSH version 2015-11-05 07:42:18 -08:00
Kelly T. Kirk
618a1c7119 Was getting system python over spack python 2015-11-05 08:01:00 -05:00
Todd Gamblin
1c4ef29962 Add Sphinx package 2015-11-04 17:55:43 -08:00
Todd Gamblin
f201bfb998 Modified bzip2 package to work properly on macs. 2015-11-04 17:43:22 -08:00
Paul Dapolito
16f0ece75b added zlib dependency to glib package specification 2015-11-01 19:55:14 -08:00
Todd Gamblin
58adff307f Merge pull request #142 from mathstuf/dbus-disable-systemd 
dbus: disable systemd
 2015-10-29 00:07:03 -07:00
Todd Gamblin
5d626ac561 Merge pull request #141 from epfl-scitas/packages/clang 
clang : updated versions + depends_on(python)
 2015-10-29 00:06:50 -07:00
Todd Gamblin
11c3a9f60d Merge pull request #143 from mathstuf/update-ncurses 
ncurses: update package
 2015-10-29 00:03:40 -07:00
Todd Gamblin
130d2d8de0 Merge pull request #144 from mathstuf/add-paraview 
paraview: add package
 2015-10-29 00:03:15 -07:00
Todd Gamblin
dab230845d Merge pull request #121 from epfl-scitas/issues/gcc 
GCC : added variant to packages for binutils, solve linking time error
 2015-10-28 23:29:33 -07:00
Ben Boeckel
ddbfc40303 paraview: add package 
A first attempt; builds successfully. Some dependencies have hard-coded
dependencies where they shouldn't (e.g., hdf5 -> mpi, libxml -> python),
but that's a different rabbit hole.
 2015-10-27 15:37:31 -04:00
Ben Boeckel
b88da83a12 dbus: disable systemd 
Not necessary in spack. Also forcefully installs outside of the prefix.
 2015-10-27 13:51:23 -04:00
Ben Boeckel
e8f5a85ffd ncurses: update package 2015-10-27 13:50:59 -04:00
Massimiliano Culpo
3913c10afb clang : updated versions and dependencies 
llvm : added dependency on 'python@2.7:' for better portability
 2015-10-27 08:04:55 +01:00
Massimiliano Culpo
8b22a4f4f8 llvm : updated versions 2015-10-27 08:04:20 +01:00
Paul Dapolito
cd2a23384f Added v5.2.2 for xz library 2015-10-26 14:28:56 -07:00
Massimiliano Culpo
e812c35689 GCC : removed binutils variant 2015-10-23 10:11:38 +02:00
Todd Gamblin
f76b3890ff Merge pull request #137 from davidbeckingsale/features/ompi-wrappers 
Filter wrapper data to use correct compilers in OpenMPI
 2015-10-22 16:01:55 -04:00
David Beckingsale
9f496e5efa Replace compiler in f90 and f77 wrappers if they exist 2015-10-22 09:50:02 -07:00
David Beckingsale
41c01b523f Filter wrapper data to use correct compilers in OpenMPI 2015-10-22 09:13:20 -07:00
Todd Gamblin
cbcc6fc9f5 Merge branch 'khuck-develop' into develop, github PR #136 2015-10-22 08:27:23 -07:00
Kevin Huck
7cb557cba7 Adding dependency on ompt-openmp, now that it is a package. 2015-10-22 08:06:31 -07:00
Kevin Huck
caf93cc408 Adding package for OMPT support in the LLVM/Clang OpenMP runtime, 
which gives OMPT support for applications built with GCC, Intel or
LLVM/Clang.
 2015-10-22 08:03:50 -07:00
Massimiliano Culpo
e6a44bd8ac GCC : removed dependency on libelf. Removed isl variant 2015-10-22 15:55:43 +02:00
Massimiliano Culpo
f475ec4ce6 Merge branch 'develop' of https://github.com/scalability-llnl/spack into issues/gcc 
Conflicts:
	var/spack/packages/gcc/package.py

GCC : removed dependency on libelf. Removed isl variant
 2015-10-22 15:53:44 +02:00
Kevin Huck
24838a62b4 Changed date formatting. 2015-10-22 06:02:56 -07:00
Kevin Huck
2a61ff0794 Changing git checkout from "master" to commit 
d2e66ddde689120472fc57fc546d8cd80aab745c
 2015-10-22 03:57:33 -07:00
Kevin Huck
fb9eca4226 Added an APEX package, but it is still using the git master instead 
of a release.
 2015-10-21 19:35:31 -07:00
Kevin Huck
c082abfb65 Modified the binutils package to use --enable-shared. Required by tools that 
use binutils and get this error (or equivalent):
"relocation R_X86_64_32S against `bfd_errmsgs' can not be used when
making a shared object; recompile with -fPIC"
 2015-10-21 18:32:57 -07:00
Todd Gamblin
1f662465c2 Merge pull request #119 from mamelara/develop 
Added current version 3.2 of libffi version 3.1 has a bug
 2015-10-21 16:07:26 -04:00
Todd Gamblin
c8f01480d6 Merge pull request #128 from mathstuf/netcdf-new-linker-mpi 
netcdf: link to MPI
 2015-10-21 16:02:59 -04:00
Todd Gamblin
c388cbe8e4 Merge pull request #131 from jsquyres/pr/openmpi-update 
openmpi: update package versions of Open MPI
 2015-10-21 15:59:12 -04:00
Todd Gamblin
6773a2b3bf Merge pull request #132 from jsquyres/pr/mpich-mpi-version-fix 
mpich: add fine-grained MPI conformance versions
 2015-10-21 15:58:41 -04:00
Todd Gamblin
59dfb1c175 Merge pull request #134 from davidbeckingsale/features/ncdu 
Added ncdu package
 2015-10-21 15:58:02 -04:00
Todd Gamblin
345fd3b285 Merge pull request #133 from epfl-scitas/packages/trilinos 
Packages/trilinos
 2015-10-21 15:54:13 -04:00
Kevin Huck
e0e79a2cb3 Adding package for activeharmony. 2015-10-21 11:56:01 -07:00
David Beckingsale
7e2f3cff44 Added ncdu package 2015-10-19 15:41:46 -07:00
Massimiliano Culpo
ec5560374c glm : added basic configuration for the package 2015-10-19 13:56:08 +02:00
Massimiliano Culpo
aab7102b9b matio : added basic configuration for the package 2015-10-19 13:55:44 +02:00
Massimiliano Culpo
3a4bdf1856 trilinos : first version that compiles on bellatrix 2015-10-19 13:48:46 +02:00
Massimiliano Culpo
ff0d039a1f trilinos : prototype for the whole package 2015-10-19 13:48:38 +02:00
Massimiliano Culpo
f4460894be hdf5 : updated version 
mpich : updated version
trilinos : created stub
 2015-10-19 13:48:24 +02:00
Todd Gamblin
44ba16a391 Add libiberty option to binutils 2015-10-17 17:04:34 -07:00
Jeff Squyres
67b94acd42 mpich: add fine-grained MPI conformance versions 
Similar to the Open MPI and MVAPICH packages.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2015-10-17 07:06:06 -04:00
Jeff Squyres
43f58d9f61 openmpi: update the MPI conformance for each Open MPI version 2015-10-16 15:27:22 -04:00
Jeff Squyres
f39e40664f openmpi: add v1.10.0 and update v1.8.2->v1.8.8 2015-10-16 15:26:58 -04:00
Ben Boeckel
9ec4ae83af netcdf: link to MPI 
Newer GNU linker refuses to use transitive linking; if netcdf calls
MPI_Allreduce, it must link the providing library directly.

Also switched to CMake because I don't know autoconf well enough to know
how to put MPI stuff into it.
 2015-10-15 09:20:16 -04:00
Gregory L. Lee
5dd39bfca5 bug fix for github issue 122 2015-10-08 08:12:30 -07:00
Todd Gamblin
5d64012868 Merge branch 'features/libxcb-1.11.1' into develop 2015-10-08 00:13:47 -07:00
Mario Melara
06fe879745 Merge branch 'features/crayproto' of https://github.com/scalability-llnl/spack into develop 2015-10-07 14:55:05 -07:00
Massimiliano Culpo
17de9a37f1 gcc : fixed spec file 2015-10-06 18:49:18 +02:00
Massimiliano Culpo
d44571257a spec file : everything is dumped, only link rule is modified 2015-10-06 18:49:04 +02:00
Massimiliano Culpo
f068d1ba57 GCC : added variants for libelf, binutils, isl. gcc@5.0: still has issues 2015-10-06 18:48:47 +02:00
Gregory L. Lee
6fcf16b710 added libxcb version 1.11.1 2015-10-05 12:59:26 -07:00
Matthew LeGendre
18f0b24a7f Add tests for spack external dependencies, plus fixes for issues found by those tests. 2015-10-05 11:37:36 -07:00
Matthew LeGendre
650c9d4e36 Allow spack to build against external non-spack-installed packages. 2015-10-05 11:37:36 -07:00
Matthew LeGendre
ee68a76a19 Bug fixes from testing spack preferred packages 2015-10-05 11:36:06 -07:00
karenyyng
f4e72f33c8 added dependencies for py-h5py 2015-10-05 08:24:33 -07:00
karenyyng
c809cc9273 clean up package.py file and remove duplicate file 2015-10-03 19:24:15 -07:00
karenyyng
f3254ff02d removed package for python packages with problematic / duplicate names 2015-10-03 19:22:53 -07:00
karenyyng
e9f7d033ff make sure submodule is added in the correct location 2015-10-03 19:13:08 -07:00
karenyyng
79808da760 added a bunch of packages and added submodule 2015-10-03 18:47:36 -07:00
Mario Melara
75d30b08fb Added current version 3.2 of libffi version 3.1 has a bug that interferes with glib 2015-10-01 21:51:55 -07:00
Mario Melara
c6cd8ae243 Use more recent version of libffi. 3.1 has a known bug that is fixed in current version 2015-10-01 21:35:25 -07:00
Adam Moody
5563c66675 update scr to 1.1.8 2015-09-29 18:18:34 -07:00
Mario Melara
13eb461ec3 Adding bowtie2 package along with patch 2015-09-24 11:21:54 -07:00
Mario Melara
521632b3dc Added samtools bioinformatics software 2015-09-23 16:30:44 -07:00
Todd Gamblin
6d4eed3845 Merge pull request #102 from RasmusWL/features/fish 
Add fish (shell) package
 2015-09-23 01:37:59 -07:00
Todd Gamblin
82ea7aec51 Merge pull request #106 from justintoo/add-package-doxygen 
(Package) Add Doxygen (v1.8.10)
 2015-09-23 01:37:31 -07:00
Todd Gamblin
d474eeb424 Merge pull request #110 from scalability-llnl/features/boostupdate 
update boost package for new releases
 2015-09-23 00:32:22 -07:00
Todd Gamblin
5d6baacc56 Merge pull request #111 from scalability-llnl/features/protobuf 
add protobuf package
 2015-09-23 00:31:26 -07:00
Todd Gamblin
46cf0a23d9 Merge pull request #112 from scalability-llnl/features/glog 
add glog package
 2015-09-23 00:30:37 -07:00
Todd Gamblin
f02af701e5 Merge pull request #113 from scalability-llnl/features/gflags 
add gflags package
 2015-09-23 00:29:50 -07:00
Todd Gamblin
5f826a0ab7 Merge pull request #114 from scalability-llnl/features/snappy 
Features/snappy
 2015-09-23 00:27:27 -07:00
Adam Moody
84823ed828 add lmdb package 2015-09-22 12:17:01 -07:00
Adam Moody
3ade141829 add leveldb package 2015-09-22 11:59:09 -07:00
Adam Moody
30acc6f2f0 add snappy package 2015-09-21 16:45:59 -07:00
Adam Moody
22ba02b22b add gflags package 2015-09-21 16:40:23 -07:00
Adam Moody
b5d7cd55ce add glog package 2015-09-21 16:30:11 -07:00
Adam Moody
e4e22ed17e add protobuf package 2015-09-21 16:19:50 -07:00
Justin Too
3691201b4f (Package) Add Spot C++ library (v1.99.3) 2015-09-21 11:04:56 -07:00
Justin Too
99ca0f3153 (Package) Add Doxygen (v1.8.10) 2015-09-11 20:29:18 +00:00
Rasmus Wriedt Larsen
b06117f77a Add fish (shell) package 2015-09-03 14:19:27 -07:00
Adam Moody
ac088bae6a update boost 2015-09-01 16:02:14 -07:00
Todd Gamblin
6af49d41fd Add elfutils. 2015-08-27 00:10:53 -07:00
Todd Gamblin
13fd742610 Merge branch 'features/pidx' into develop 2015-08-26 23:48:52 -07:00
Todd Gamblin
babbc5bb45 Minor fix-ups for PIDX 2015-08-26 23:48:36 -07:00
Gregory L. Lee
2c3e7a6f87 added graphviz dependency and dysect variant to STAT 2015-08-25 11:48:12 -07:00
Gregory L. Lee
1c9c5a385d added graphviz and dependencies 2015-08-25 11:38:39 -07:00
Todd Gamblin
360b307f68 Save progress. import gov.llnl.spack.mpich works. 2015-08-24 09:14:16 -07:00
Gregory L. Lee
689dbb8fb6 use filter_file instead of patch 2015-08-24 08:51:41 -07:00
Jim Galarowicz
24c609b6df Updates to the Krell related product packages. 2015-08-22 09:34:44 -05:00
Cyrus Harrison
8821715377 add version-based url map for cmake, provide md5 for cmake 3.3.1 2015-08-19 14:18:02 -07:00
Jim Galarowicz
fe9959d4da Merge remote-tracking branch 'upstream/develop' into develop 2015-08-18 08:05:25 -05:00
Peer-Timo Bremer
40b21d7cbe Initial version of PIDX package 2015-08-17 15:38:12 -07:00
Gregory L. Lee
bd1cd83d71 added lapack and blas deps, fixed gfortran compiler dependency 2015-08-17 11:54:14 -07:00
Todd Gamblin
a2f2e6a4ff Save changes to external repo integration 2015-08-16 12:54:02 -07:00
Matthew LeGendre
c7b8d09c7f Add packagerepos to spack, allowing for creating multiple package repositories. 2015-08-16 12:48:32 -07:00
Gregory L. Lee
92ea86dc36 moved lapack package to netlib-lapack 2015-08-14 16:30:35 -07:00
Gregory L. Lee
ec47ab16ce updated blas and lapack packages 2015-08-14 16:27:51 -07:00
Todd Gamblin
c8f65c1530 Fix 2.6 incompatibility 2015-08-13 00:21:02 -07:00
Todd Gamblin
17c2a0d6f3 Merge pull request #92 from trws/flux-build 
pre-alpha flux build and requisite dependencies
 2015-08-13 00:02:49 -07:00
Todd Gamblin
58f848fa29 Merge pull request #94 from alfredo-gimenez/dev-pandas 
Fixed py-pandas package
 2015-08-13 00:00:35 -07:00
Todd Gamblin
f34b04e555 Merge pull request #87 from alfredo-gimenez/develop 
Added gui and cscope features to Vim package
 2015-08-12 23:58:27 -07:00
Alfredo Gimenez
d6bf9c9887 Cscope vim variant depends on cscope 2015-08-07 07:58:04 -07:00
Alfredo Gimenez
d017c5080a Fixed py-pandas package 2015-08-07 00:03:14 -07:00
Alfredo Gimenez
067ecb90b9 Added cscope (dependency for vim+cscope) 2015-08-06 09:28:28 -07:00
Tom Scogland
7182671f8f pre-alpha flux build and requisite dependencies 
NOTE: the ncurses package now installs *BOTH* versions, wide and non-wide
character for compatibility with packages that require either one.  It may be
desirable for this to be an option in the future.
 2015-08-03 11:59:52 -07:00
Mike Nolta
7ebb4fcedc add missing gmp dependency to mpfr package 2015-08-01 16:00:13 -04:00
Tom Scogland
016eef6a16 adding the bear compilation database generator 2015-07-29 14:21:03 -07:00
Alfredo Gimenez
00ab6eb616 Vim with added feature support, including gvim 2015-07-23 11:38:02 -07:00
Tom Scogland
6ad5210216 adding a zsh package 2015-07-22 11:35:51 -07:00
Jim Galarowicz
9fee7be695 Add the initial version of the OpenSpeedShop spack build file. OpenSpeedShop is an application performance analysis tool that runs on Linux and gathers a number of different types of performance data and displays that data in a command line tool (CLI) and via a graphical user interface (GUI). 2015-07-21 11:26:59 -05:00
Jim Galarowicz
e8235b10c6 Add the cbtf-lanl spack build package. cbtf-lanl is LANLs contribution to the CBTF project. It contains psTool and memTool which are example tools, showing use case examples for CBTF. 2015-07-21 11:23:23 -05:00
Jim Galarowicz
23971bae92 Add the cbtf-krell spack build package. cbtf-krell is the krell contribution to the CBTF project and includes services, messages, and core libraries and components that support performance information gathering, transfer, and reduction. 2015-07-21 11:20:27 -05:00
Jim Galarowicz
eff5016653 Add the cbtf spack build package. cbtf is the base package for the component based tool framework and is used for building and connecting cbtf components, including distributed components via the MRNet transfer mechanism. 2015-07-21 11:15:53 -05:00
Jim Galarowicz
a9c737f911 Add spack build package for Xerces-C which is a supporting package for the krell related projects. 2015-07-21 10:59:52 -05:00
Jim Galarowicz
f5093094eb Add the cbtf-argonavis project package file. cbtf-argonavis is a project based on CBTF that supports performance analysis of GPU applications. 2015-07-21 10:58:16 -05:00
Jim Galarowicz
15ec3cb3cd Add qt3 version support and a variant that controls patching the qt3 version for compile issues and answering yes to the license questions during build. 2015-07-21 10:51:53 -05:00
Jim Galarowicz
b4e0804b37 Add the latest version to the papi package. 2015-07-21 10:50:11 -05:00
Jim Galarowicz
64c8fd3fa1 Add krelloptions variant that is used to turn on a configuration option to build the thread safe lightweight libraries. 2015-07-21 10:49:15 -05:00
Jim Galarowicz
13421dc4aa Add patches that enable features added for krell related products. Update the package file to add a krellpatch variant to control adding the patches. 2015-07-21 10:20:05 -05:00
Jim Galarowicz
0591980cbe Add configuration change for krell related products, they expect the dyninst includes in include/dyninst. 2015-07-21 10:17:37 -05:00
Jim Galarowicz
d1f127d8ef Add changes for krell related products to binutils. Add a patch that installs libiberty_pic.a which krell products will favor/use. 2015-07-21 10:15:17 -05:00
Todd Gamblin
e097696390 Update concretize to check for more changes and iterate further. 2015-07-16 01:12:11 -07:00
Todd Gamblin
8828dbf2e8 Remove superfluous print in vim. 2015-07-14 23:48:07 -07:00
Todd Gamblin
2e90599283 Merge branch 'develop' of github.com:scalability-llnl/spack into develop 2015-07-14 23:43:59 -07:00
Todd Gamblin
6f8a4318c5 Remove python 2.6-incompatible format expression. 2015-07-13 18:25:18 +00:00
Tom Scogland
889485181e adding gnu global tags and exuberant ctags 2015-07-10 13:54:38 -07:00
Tom Scogland
fda208f6b8 adding YAPF (Yet Another Python Formatter) 2015-07-09 14:55:27 -07:00
Gregory L. Lee
2e37523428 for LaunchMON added latest git commit and dependences 2015-07-08 11:25:41 -07:00
Gregory L. Lee
ddfc276688 removed workaround 2015-07-02 15:14:30 -07:00
Florent Pruvost
e06d351f7a add cblas headers in install directory 2015-07-02 02:05:00 -07:00
Todd Gamblin
7625881cb3 Merge pull request #75 from alfredo-gimenez/develop 
Thanks!
 2015-07-02 01:27:47 -07:00
Todd Gamblin
6f94a2567b Add py-lockfile and py-python-daemon packages. 2015-07-02 00:40:25 -07:00
Alfredo Gimenez
25c1678004 Commented out old version 2015-06-23 17:39:23 -07:00
Alfredo Gimenez
9f27ddc256 New mpfr release invalidates previous download link (not sure where old version is...) 2015-06-23 17:36:57 -07:00
Todd Gamblin
a51d4afe3e Minor simplification (os.environ -> env) 2015-06-20 20:25:12 -07:00
Alfredo Gimenez
314ecc54fe Thrift python support 2015-06-18 17:29:16 -07:00
Alfredo Gimenez
f832719ceb Added silo 4.8 with HDF5 (for LULESH 2.0) 2015-06-18 12:31:01 -07:00
Alfredo Gimenez
0c028e24b4 Removed Lua dependency 2015-06-18 10:30:02 -07:00
Alfredo Gimenez
55e24548c3 Added Thrift (HBase management in C++) 2015-06-18 10:29:34 -07:00
Tom Scogland
912c29471a adding python pyelftools package 2015-06-17 15:19:46 -07:00
Todd Gamblin
607f263fbc Merge pull request #61 from alfredo-gimenez/develop 
Mitos 0.9.1
 2015-06-11 16:31:28 -07:00
Todd Gamblin
3cb10f92af Merge pull request #62 from trws/tmuxinator 
Partial ruby extension and tmuxinator package
 2015-06-11 16:31:15 -07:00
Todd Gamblin
9955df896b Merge pull request #63 from trws/silver-searcher 
adding package for the silver searcher
 2015-06-11 16:31:04 -07:00
Tom Scogland
a087fd71e4 Removing comment line 
Missed that the auto-generated comment line stuck around.
 2015-06-11 13:57:19 -07:00
Tom Scogland
d92ac2a6b2 Small ruby enhancement and tmuxinator package 
It is currently less painful to pull the source from github, compile it into a
gem, then install the gem, than it is to download a gem and install it.  This
still lacks an activation mechanism, but `spack use tmuxinator` is functional.
 2015-06-11 13:51:53 -07:00
Alfredo Gimenez
afe3c5b6bb Mitos 0.9.1 2015-06-11 11:02:51 -07:00
Tom Scogland
cd581d1d5a adding package for the silver searcher 2015-06-10 14:24:38 -07:00
Tom Scogland
2d465ffd10 partial upgrade to vim package 2015-06-10 14:14:31 -07:00
Todd Gamblin
04bcf43649 Merge pull request #58 from trws/python-cffi 
Python cffi
 2015-06-10 00:36:37 -07:00
Todd Gamblin
874326a1ad Merge pull request #56 from trws/uuid-task-and-taskd 
package files for libuuid, needed for flux and taskwarrior packages
 2015-06-10 00:35:30 -07:00
Tom Scogland
c8ad456fd6 nettle depends on gmp, without it the nettle build fails on gcc 4.9.2 2015-06-09 19:37:42 -07:00
Tom Scogland
8839eeb421 new package files for python-cffi and its dependency pycparser 2015-06-09 19:36:08 -07:00
Tom Scogland
eab3d4811e package files for libuuid, needed for flux and taskwarrior packages, along with the taskwarrior packages 2015-06-09 19:26:49 -07:00
Todd Gamblin
e64c0f4e4e Fix Boost finding in Dyninst 8.2.1. 2015-06-09 17:48:38 -07:00
Todd Gamblin
bde9c7eee3 Upate ATLAS and netlib-blas. 2015-06-07 15:41:15 -07:00
Todd Gamblin
0570660d81 Make blas a virtual dependency, default netlib-blas. 2015-06-06 18:23:12 -07:00
Todd Gamblin
26b9592780 Add disablement of cpu throttle check. 2015-06-06 18:19:05 -07:00
Todd Gamblin
8b9dcfe635 Delete lapack/atlas combined package. 2015-06-06 18:18:51 -07:00
Todd Gamblin
5d94864b6c Rename netlib_blas -> netlib-blas 2015-06-06 18:18:44 -07:00
Todd Gamblin
50d7b3df2b Merge branch 'psaravan-fastmath' into features/fastmath 
Conflicts:
	var/spack/packages/lapack/package.py
 2015-06-06 18:17:59 -07:00
Todd Gamblin
8215c85619 Merge branch 'develop' into features/fastmath 2015-06-06 18:15:52 -07:00
Todd Gamblin
c43b5d670b Remove dummy fastmath package. 2015-06-06 17:48:33 -07:00
Todd Gamblin
b6ad37557f fix up Saravan's petsc install 2015-06-06 17:41:15 -07:00
Todd Gamblin
d266bf0184 Working Hypre, PARPACK. 2015-06-06 17:21:11 -07:00
Todd Gamblin
5294e2b9b9 CGM package working on cab. 2015-06-06 16:56:59 -07:00
Todd Gamblin
c5ab3f4e82 CBLAS package working and patching in spack compilers. 2015-06-06 16:29:37 -07:00
Todd Gamblin
f29fc5822b Working boxlib package. 2015-06-06 16:16:19 -07:00
Todd Gamblin
b9746de52e Working ARPACK package. 2015-06-06 15:26:54 -07:00
Todd Gamblin
03780ea105 Remove autosave files from saravan's PR 2015-06-06 15:26:54 -07:00
Todd Gamblin
422a75e4b8 Clean up arpack build, use the Spack f77 compiler. 2015-06-06 15:26:54 -07:00
Saravan Pantham
1f0246f970 Updated HDF5 to use MPI. 2015-06-06 15:26:43 -07:00
Saravan Pantham
9d71093500 Updated Zoltan. 2015-06-06 15:26:42 -07:00
Saravan Pantham
fd34f4b119 Added more FASTMath packages. 2015-06-06 15:26:38 -07:00
Saravan Pantham
c174fe6199 Fixed BLAS and Lapack installations 2015-06-06 15:26:31 -07:00
Saravan Pantham
d461aa3722 Added Lapack package 2015-06-06 13:06:18 -07:00
Saravan Pantham
a23e1579e3 Added BLAS package 2015-06-06 13:06:17 -07:00
Todd Gamblin
ab31f989db Merge Alfredo's Mitos changes from github with Greg's Python changes. 2015-06-06 12:53:28 -07:00
Gregory L. Lee
96ec75f7fe Merge branch 'develop' of ssh://cz-stash.llnl.gov:7999/scale/spack into develop 2015-06-04 15:49:57 -07:00
Gregory L. Lee
5ac5c021b8 new package versions 2015-06-04 15:49:55 -07:00
Alfredo Gimenez
dae33a31c0 Dyninst 8.2.1+ dependency for cmake 2015-06-03 22:02:47 -07:00
Alfredo Gimenez
15aee0de1a Mitos updated with new release 2015-06-03 21:58:44 -07:00
Gregory L. Lee
c4f5a881e6 new Python extensions 2015-06-03 10:08:07 -07:00
Gregory L. Lee
6dffe2ddd1 updated url 2015-06-03 10:07:21 -07:00
Gregory L. Lee
74b0a9c059 updated Python extension versions 2015-06-01 08:39:01 -07:00
Gregory L. Lee
83af842a74 fixed cython activation conflict 2015-06-01 08:38:32 -07:00
Todd Gamblin
f813d823a1 Merge branch 'features/optional-deps' into develop 
This includes:
- Much better variant support (+debug/-debug)
- Optional dependency support (depends_on(... , when='<condition>')
- New config file format (YAML in ~/.spack)
- New Spec format (YAML in $prefix/.spack/spec.yaml)
 2015-05-18 16:16:20 -07:00
Matthew LeGendre
46b91ddf57 YAML config files for compilers and mirrors 2015-05-18 16:01:21 -07:00
Gregory L. Lee
50970b72d8 added py-pandas 2015-05-12 13:47:48 -07:00
Todd Gamblin
cd5fa128c5 Work on SPACK-41: Optional dependencies work for simple conditions. 
- Can depend conditionally based on variant, compiler, arch, deps, etc
  - normalize() is not iterative yet: no chaining depends_ons
  - really need a SAT solver, but iterative will at least handle
    simple cases.

- Added "strict" option to Spec.satisfies()
  - strict checks that ALL of other's constraints are met (not just
    the ones self shares)
  - Consider splitting these out into two methods: could_satisfy() and
    satisfies()
    - didn't do this yet as it would require changing code that uses
      satisfies()

- Changed semantics of __contains__ to use strict satisfaction (SPACK-56)

- Added tests for optional dependencies.

- The constrain() method on Specs, compilers, versions, etc. now
  returns whether the spec changed as a result of the call.
 2015-05-12 09:56:59 -07:00
Todd Gamblin
ef9deeccd1 Merge branch 'features/yaml-spec' into features/optional-deps 2015-05-10 19:28:47 -07:00
Todd Gamblin
43e5465592 Fix bug in directory layout hidden files() 2015-05-10 17:56:27 -07:00
Todd Gamblin
3b1898b8e4 Fix SPACK-40: Finish adding variant directive. 
- Variants are now declarable in packages using the variant() directive.
- Variants are checked - you can't just ask for a random variant, it has to be declared.
- conditional logic (@when, if, '+debug' in spec, etc.) still required in package to
  implement variant.
 2015-05-10 12:24:03 -07:00
Cyrus Harrison
8c4fe6d249 added simple spack package files for uncrustify and cppcheck 2015-04-30 22:42:53 -07:00
Alfredo Gimenez
0f5b26c9cd MemAxes and Mitos 2015-04-09 14:46:33 -07:00
Todd Gamblin
37a5c3b09f Version bump for adept-utils 2015-04-01 00:05:26 -07:00
Matthew LeGendre
89731d4a7d Add binutils as a gcc dependency so it doesn't use the system linker/assembler. 2015-03-30 14:23:02 -07:00
Matthew LeGendre
50687e08cb Fix QT with gcc 4.9 build error where QT's -Wl,--no-undefined interfered with gcc's implicit libgcc_s.so library 2015-03-27 17:32:37 -07:00
Todd Gamblin
c10773503b Merge branch 'benjaminwalters-develop' into features/blas 
Conflicts:
	var/spack/packages/lapack/package.py
 2015-03-26 00:31:34 -07:00
Todd Gamblin
fa53bb835c Merge branch 'kev40293-develop' into features/blas 2015-03-26 00:12:41 -07:00
Benjamin Walters
1b75b34eb6 Removed subprocess.call calls and replaced with spack symlink calls 2015-03-19 04:37:21 -05:00
Benjamin Walters
3d2df174d1 Added package files for Lapack (has virtual dependency blas) and Netlib blas (provides virtual dependency blas). 2015-03-19 03:20:24 -05:00
Todd Gamblin
32244ac733 MPICH provides environment vars to make MPI compilers behave like spack. 2015-03-13 13:32:24 -07:00
Todd Gamblin
b80e091f46 metis package. 2015-03-13 00:03:33 -07:00
Todd Gamblin
32e2f21e8d Working scotch package. 2015-03-12 08:49:45 -07:00
Todd Gamblin
81d518438c Point ravel download at the github release page. 2015-03-12 06:54:15 -07:00
Todd Gamblin
b24aca6da2 Add -Wno-dev to avoid cmake policy warnings. 2015-03-12 06:54:15 -07:00
Todd Gamblin
e624ebec07 Working ravel package. 2015-03-12 06:54:15 -07:00
Todd Gamblin
14a79a2ddf Add OTF package. 2015-03-12 06:54:14 -07:00
Todd Gamblin
d6c14f40b2 SAMRAI builds on cab with new URL. 2015-03-11 19:14:43 -07:00
Todd Gamblin
f8044e0290 SAMRAI URL update. 2015-03-11 18:58:29 -07:00
Todd Gamblin
fbebb94cd6 Add cram package. 2015-03-05 11:05:42 -08:00
Todd Gamblin
30e45df8a5 Updates to atlas packages. 2015-03-04 09:34:42 -08:00
Kevin Brandstatter
8921d52a82 Working lapack install linking to installed ATLAS 2015-03-03 22:27:16 -06:00
Kevin Brandstatter
0de021d427 Added LAPACK package file that depends on and builds against ATLAS 2015-03-03 19:21:02 -06:00
Kevin Brandstatter
08f37d478f Removed FIXME comments from atlas 2015-03-01 21:26:37 -06:00
Kevin Brandstatter
2f2eab0e15 Merge branch 'develop' of github.com:kev40293/spack into develop 2015-02-26 14:42:12 -06:00
Kevin Brandstatter
bbfc519ee5 Added packaging files for ATLAS with and without netlib's LAPACK 2015-02-26 14:41:46 -06:00
Todd Gamblin
ffdb90f39a Last minute Qt bugfix. 2015-02-24 10:42:35 -08:00
Todd Gamblin
daef78f538 Update packaging documentataion. 2015-02-23 10:31:22 -08:00
Saravan Pantham
14e70ad689 Added netcdf package support. 2015-02-18 18:05:57 -08:00
Todd Gamblin
c7b8a4e25c Fix for SPACK-46: cleanup spack clean, spack restage. 2015-02-18 14:00:37 -08:00
Todd Gamblin
db11373351 Resurrect combined qt4/5 package from b7dacb 2015-02-18 13:16:22 -08:00
Gregory L. Lee
59198e29f9 Merge branch 'develop' of ssh://cz-stash.llnl.gov:7999/scale/spack into develop 2015-02-18 13:14:26 -08:00
Gregory L. Lee
6e13d0985c fixed deps for python packages 2015-02-18 13:13:19 -08:00
Todd Gamblin
3e5aa4b0f5 llvm/clang version bump 2015-02-18 10:59:03 -08:00
Todd Gamblin
959ce4f985 Downgrade standard version of ImageMagick to a non-changing URL. 
- bleeding edge still available but commented by default.
 2015-02-18 10:59:03 -08:00
Gregory L. Lee
44003449d5 fixed install steps for version 4 2015-02-17 16:26:00 -08:00
Todd Gamblin
17ac609d23 Merge branch 'features/memaxes' into develop 
Conflicts:
	var/spack/packages/libpng/package.py
 2015-02-17 00:49:52 -08:00
Todd Gamblin
724b72bdaf take out dyninst 8.2 for now. 
- doesn't build correctly with boost 1.55
 2015-02-17 00:47:35 -08:00
Todd Gamblin
4af85441db Merge branch 'features/python-modules' into develop 2015-02-17 00:44:02 -08:00
Todd Gamblin
57f331e2ac Ignore conflicting nose tests in py-nose and py-matplotlib. 2015-02-17 00:22:18 -08:00
Todd Gamblin
67db8ddca8 Factor ignore logic into a predicate builder. 2015-02-17 00:21:15 -08:00
Todd Gamblin
06d6b0b205 More py-setuptools dependencies added. 2015-02-16 21:53:55 -08:00
Todd Gamblin
13376efafc Add package-specific rpath back to shiboken and pyside. 2015-02-16 21:53:34 -08:00
Todd Gamblin
614c22fc1b Allow forced deactivation -- best effort unlinking 
spack deactivate -f will unlink even if Spack thinks the package isn't enabled.
Made deactivate routines idempotent.
 2015-02-16 12:41:22 -08:00
Todd Gamblin
8aa3afcfde Python package cleanup. 
- Added a number of dependencies to python packages.
- Python packages may still not build without some OS support.
- Example: Numpy needs ATLAS, and will use a system ATLAS install.
  - Atlas requires turning off CPU throttling to build.
  - can't do this as a regular user -- how to build ATLAS with Spack
  - currnetly relying on a system ATLAS install.
 2015-02-15 23:04:20 -08:00
Todd Gamblin
847ed8ad39 Add libxslt, cleanup libxml2. 2015-02-15 23:04:04 -08:00
Todd Gamblin
b86eb69552 libgcrypt and libgpg-error packages. 2015-02-15 23:03:33 -08:00
Todd Gamblin
65d60f92f5 qhull package. 2015-02-15 23:02:51 -08:00
Todd Gamblin
36579844d9 Add Tcl/Tk packages. 2015-02-15 23:02:36 -08:00
Todd Gamblin
ce011501f9 Add R package. 2015-02-15 23:02:21 -08:00
Todd Gamblin
b11061f99d Rename py-pyqt4 to py-pyqt. 2015-02-15 12:40:02 -08:00
Todd Gamblin
2f67cdaf10 Better time output on build completion. 2015-02-15 12:39:10 -08:00
Todd Gamblin
3c0048dd89 py-sip installs properly into a prefix 2015-02-15 01:59:36 -08:00
Todd Gamblin
c0c0879924 Better extension activation/deactivation 2015-02-15 01:58:35 -08:00
Todd Gamblin
0c94a6e2b0 Merge branch 'features/python-modules' into features/memaxes 
Conflicts:
	var/spack/packages/qt/package.py
 2015-02-12 10:01:58 -08:00
Gregory L. Lee
5c2608b032 typo: Self -> self 2015-02-09 15:55:18 -08:00
Todd Gamblin
25af341954 Python package improvements. 2015-02-09 02:54:49 -08:00
Alfredo Gimenez
27617670f0 qt with hardware accelerated opengl working 2015-02-09 00:01:07 -08:00
Todd Gamblin
20ec80295d setup_extension_environment is now setup_dependent_environment. 
- other packages, like Qt, can now use this to set up relevant build
  variables and env vars for their dependencies.

- not just extensions anymore.
 2015-02-08 19:41:17 -08:00
Todd Gamblin
e51e01f4f0 Cleaned up python to remove redundant line. 2015-02-08 19:39:36 -08:00
Alfredo Gimenez
9e878075ac mesa 8.0.5 working 2015-02-08 16:09:13 -08:00
Alfredo Gimenez
cc684a3ebe older mesa for 2.6 kernel (not workin yet) 2015-02-08 13:34:45 -08:00
Alfredo Gimenez
1605e04d44 mesa and systemd (systemd not working yet) 2015-02-07 22:08:50 -08:00
Alfredo Gimenez
932f3930f4 util-linux added 2015-02-07 09:18:34 -08:00
Alfredo Gimenez
676cc84c9e more mesa dependencies 2015-02-06 17:24:55 -08:00
Alfredo Gimenez
5fdf5438ea flex and bison 2015-02-06 16:55:48 -08:00
Alfredo Gimenez
d95d48bbe6 py-mako and fix for setup-env.sh 2015-02-06 16:43:21 -08:00
Gregory L. Lee
5cc369c2b8 add dependent packages to PYTHONPATH for build 2015-02-06 16:35:35 -08:00
Alfredo Gimenez
a4ac1977a4 merge with python-modules 2015-02-06 16:27:33 -08:00
Todd Gamblin
457f2d1d51 Fix libpng to use a better URL 
Sourceforge URLs like this eventually die when the libpng version is bumped:
    http://sourceforge.net/projects/libpng/files/libpng16/1.6.14/libpng-1.6.14.tar.gz/download

But ones like this give you a "permanently moved", which curl -L will follow:
    http://download.sourceforge.net/libpng/libpng-1.6.16.tar.gz
 2015-02-06 08:37:22 -08:00
Todd Gamblin
2d9190d264 Add extensions command. 2015-02-02 11:20:36 -08:00
Gregory L. Lee
48f1ff87f8 added more Python modules 2015-02-02 11:19:54 -08:00
Gregory L. Lee
2bc3f74df2 added more Python modules 2015-02-02 11:19:54 -08:00
Todd Gamblin
de91c95e8e Ability to ignore files in activate/deactivate for extensions. 2015-02-02 11:19:54 -08:00
Todd Gamblin
ff9cb94f4f Add arguements to extends() and activate/deactivate. 2015-02-02 11:19:54 -08:00
Gregory L. Lee
9fa489b7f2 added several modules 2015-02-02 11:19:54 -08:00
Gregory L. Lee
7992f415fe added py-nose 2015-02-02 11:19:54 -08:00
Todd Gamblin
bcccf02020 Add setup_extension_environment() method. 
- lets packages do some setup before their extensions run install()
 2015-02-02 11:19:53 -08:00
Todd Gamblin
9977543478 Added feature: package extensions 
- packages can be "extended" by others
- allows extension to be symlinked into extendee's prefix.
- used for python modules.
  - first module: py-setuptools
 2015-02-02 11:19:00 -08:00
Todd Gamblin
2c1eda66c4 First python extension package: setuptools 2015-02-02 11:16:23 -08:00
Alfredo Gimenez
6a496ef620 PSAPI v0.6 -> Mitos v0.7 2015-01-23 16:58:15 -08:00
Todd Gamblin
0ac6ffb3ef Add extra gcc dependencies. 
- not used until optional/conditional deps are implemented.
 2015-01-23 00:05:23 -08:00
Todd Gamblin
3e37903ffd Packages have rpath property. 2015-01-23 00:03:51 -08:00
Alfredo Gimenez
e97db785d6 psapi v0.6 2015-01-21 20:42:44 -08:00
Todd Gamblin
2a0e33876e Add PSAPI 2015-01-19 20:45:27 -08:00
Todd Gamblin
d08c0703a0 Initial build of MemAxes GUI. 2015-01-19 14:07:41 -08:00
Todd Gamblin
b7dacb427d Qt5 & VTK builds. VTK works with Qt 4 and 5. 2015-01-19 14:07:09 -08:00
Todd Gamblin
0211adbdb6 version bump libpng 2015-01-19 14:06:25 -08:00
Todd Gamblin
53c8b4249a Make dbus put a machine id file in the right place. 2015-01-19 14:06:09 -08:00
Todd Gamblin
a4c19eee14 Qt5 webkit requires gperf 2015-01-19 14:00:54 -08:00
Todd Gamblin
4e3662f318 Dyninst 8.2 works. 2015-01-17 17:09:42 -08:00
Todd Gamblin
fa67d69585 Merge branch 'develop' of github.com:scalability-llnl/spack into develop 2015-01-13 00:53:04 -08:00
Todd Gamblin
917d82be0d Add list_url for ompss 2015-01-13 00:45:12 -08:00
Luc Jaulmes
844c083848 Updated versions in OmpSs and Extrae, which resolves version-dependency problems with MPI 2015-01-12 20:38:32 +01:00
Todd Gamblin
36198c525b Merge pull request #10 from justintoo/rose 
Add Packages for ROSE and JDK
 2015-01-08 09:10:52 -08:00
Justin Too
3a07ec6c7d (Package) Add ROSE compiler package 2015-01-07 14:07:35 -08:00
Justin Too
cd9e4b5b7f (Package) Add Oracle JDK package 2015-01-07 14:07:02 -08:00
Todd Gamblin
9dabcc8703 Git package. 2014-12-26 00:07:15 -08:00
Todd Gamblin
b0ce1b81ba Fix SPINDLE and SCR download URLs. 2014-12-25 18:42:03 -08:00
Todd Gamblin
0bc861db6e Fix up bzip2 install 2014-12-25 17:55:19 -08:00
Todd Gamblin
d98e475361 Qt4 builds successfully with proper RPATHs. 2014-12-25 16:09:42 -08:00
Todd Gamblin
01ca61c7cc Updates for Qt dependencies 2014-12-23 14:43:05 -08:00
Todd Gamblin
8edf299dd2 gnutls, nettle, wget, dbus 2014-12-23 14:43:05 -08:00
Todd Gamblin
e0b5890ab5 Initial versions of Qt and some dependencies. 2014-12-23 14:43:04 -08:00
Todd Gamblin
983f35f32a Tweak extrae indentation. 2014-12-22 23:24:21 -08:00
Adam Moody
a9be5e7239 add gperftools (tcmalloc and friends) 2014-12-18 11:31:58 -08:00
Todd Gamblin
588955a987 Disable pkgconfig files until I support this better. 2014-12-05 08:45:51 -08:00
Todd Gamblin
7dc90c7097 Add experimental gasnet package for legion. 2014-12-04 10:53:52 -08:00
Todd Gamblin
c19347a055 Merge branch 'features/mpibash' into develop 2014-12-02 23:00:11 -08:00
Adam Moody
0f04f75fa3 add autoconf and libcircle dependencies, call autoconf before configure 2014-12-02 22:59:33 -08:00
Todd Gamblin
908400bfc5 Fix dyninst 8.1.1 checksum. 2014-12-02 21:57:37 -08:00
Todd Gamblin
0c12e26026 Bugfix in boost build. 
- b2 used to be called bjam
 2014-12-02 14:25:52 -08:00
Todd Gamblin
79414947ae Merge branch 'features/gcc' into develop 
Conflicts:
	lib/spack/spack/package.py
 2014-11-08 22:30:46 -08:00
Todd Gamblin
57076f6ca4 URL parsing improvements 2014-11-08 11:42:54 -08:00
Todd Gamblin
9033ae6460 Add package for Sandia QThreads. 2014-11-07 00:20:39 -08:00
Todd Gamblin
d78ece658b Change to faster gcc mirror that allows spidering. 2014-11-07 00:13:52 -08:00
Todd Gamblin
b97ee67a4b Working GCC package. 2014-11-05 09:54:43 -08:00
Todd Gamblin
a37828bafb Packages for gcc and its dependencies. 2014-11-04 13:42:47 -08:00
Todd Gamblin
488a6737b7 Merge branch 'features/python' into develop 2014-11-03 14:20:37 -08:00
Todd Gamblin
7905b50dcb Bump ImageMagick version 2014-11-03 14:19:24 -08:00
Todd Gamblin
6c4bac2ed8 Update libmonitor URL to point to google code. 2014-11-03 14:17:10 -08:00
Todd Gamblin
6c8c41da98 Working Python 2.7.8, ncurses, readline 2014-11-03 14:12:16 -08:00
Todd Gamblin
1656f62a12 Add bzip2 package and spack pkg add command. 2014-11-03 14:12:16 -08:00
Todd Gamblin
8c8fc749be Initial versions of python and libffi. 2014-11-03 14:12:06 -08:00
Todd Gamblin
132c32076a Add Muster parallel clustering library. 2014-10-28 16:44:35 -07:00
Todd Gamblin
ee50a4ccce Merge branch 'features/mpe2' into develop 2014-10-27 21:30:58 -07:00
Todd Gamblin
f918ea1ba7 Merge branch 'features/coreutils' into develop 2014-10-27 20:44:32 -07:00
Todd Gamblin
1c4948e1b0 Fix long-standing multimethod test error. 
- New inclusive version ranges from git-fetching branch enable a fix.
- Can now write :1 to include 1.3, 1.4, etc.
  - couldn't do this before so provides() was weird.
 2014-10-27 20:02:24 -07:00
Todd Gamblin
e2af2a27bf Merge branch 'features/git-fetching' into develop 
Conflicts:
	lib/spack/docs/packaging_guide.rst
	lib/spack/spack/cmd/info.py
	lib/spack/spack/package.py
	lib/spack/spack/stage.py
 2014-10-27 19:53:05 -07:00
Bob Robey
f9149b6cb6 Fixing errors in depends_on and updating version for ImageMagick 2014-10-25 21:59:01 -06:00
Bob Robey
76ed5c212c Adding autotools and ImageMagick and patch for mpe2 2014-10-25 21:25:25 -06:00
Todd Gamblin
340b5590f1 Add coreutils package. 2014-10-25 14:41:06 -07:00
Todd Gamblin
ce1b30c229 Adding initial version of MPE2 package. 2014-10-23 21:08:13 -07:00
Todd Gamblin
c08985f7d1 Add bib2xhtml 2014-10-22 01:08:08 -07:00
Todd Gamblin
e4c2891d4b Test for URL extrapolation. 2014-10-22 00:49:16 -07:00
Todd Gamblin
fb3003f664 Bug fixes for URLs and mirror fetching. 2014-10-16 06:56:00 -07:00
Todd Gamblin
1fcfb80bdd SPACK-19 no longer an issue. Removing libtool copy. 2014-10-10 09:23:28 -07:00
David Boehme
8857b1f69e Add Scalasca 2.1 2014-10-08 17:31:11 -07:00
Todd Gamblin
4c614ac768 Add SUNDIALS solver package. 2014-10-08 03:10:29 -07:00
Todd Gamblin
36a87f5bf9 Update documentation to add an auto-generated list of packages. 2014-10-08 03:08:40 -07:00
Todd Gamblin
4cae48c8df Add libNBC (non-blocking collectives) 2014-10-06 13:48:50 -07:00
Todd Gamblin
616d232257 Add package for Torsten's netgauge tool. 2014-10-06 10:26:54 -07:00
Todd Gamblin
37e96ff6e1 Added test for Mercurial fetching. 2014-10-04 18:38:47 -07:00
Todd Gamblin
0fa1c5b0a5 Add Mercurial fetch strategy and lwm2. 2014-10-03 16:57:32 -07:00
Todd Gamblin
faae720c36 add tests for svn fetching. 2014-10-03 16:55:53 -07:00
Todd Gamblin
da84764e97 Add test case for git fetching. 2014-10-03 16:55:53 -07:00
Todd Gamblin
c74cd63389 Callpath build works when a tag is fetched from git. 2014-10-03 16:55:53 -07:00
Todd Gamblin
1b67c8493e Merge branch 'features/automaded' into develop 2014-09-28 11:05:42 -07:00
Todd Gamblin
3bd52678be MPICH sets MPI compilers to use real compilers and not spack wrappers. 2014-09-27 21:36:42 -07:00
Todd Gamblin
63292c5826 Update callpath to 1.0.2 2014-09-27 16:07:20 -07:00
Todd Gamblin
bff2192498 Added SWIG package. 2014-09-23 21:48:44 -07:00
Todd Gamblin
2de2d4bea7 Modify MPI installs to work without fortran. 2014-09-23 14:59:30 -07:00
Todd Gamblin
c9fbba22a2 First version of AutomaDeD package. 2014-09-19 09:55:31 -07:00
Todd Gamblin
fa5594e13f Merge branch 'features/llvm' into develop 
- merging parts of LLVM that can be built now.
- need to wait for standalone builds for some of the others.
 2014-09-18 23:30:32 -07:00
Todd Gamblin
9165a000a3 Better C++11 support, remove non-standalone llvm-compiler-rt. 
- LLVM non-standalone add-ons are difficult to build outside LLVM.
- May have to wait for future versions of LLVM to build some of these
 2014-09-18 23:22:03 -07:00
Todd Gamblin
e46e1d51c2 Merge branch 'features/fileutils-deps' into develop 2014-09-18 21:39:41 -07:00
Todd Gamblin
4d2ccfa028 Take fileutils out and just merge the deps into develop. 2014-09-18 21:33:09 -07:00
Todd Gamblin
e85830e313 Fileutils successfully finds libarchive; can't find dtcmp despite config arg. 2014-09-18 01:49:30 -07:00
Adam Moody
250ffc28a3 update libcircle to download tarball from github/hpc 2014-09-17 23:40:16 -07:00
Todd Gamblin
607b4c8414 Merge branch 'features/scorep-packages' into develop 2014-09-17 13:38:33 -07:00
David Boehme
31bd1e069c Add Score-P 1.3 release. Works for gcc, still some issues with Intel builds. 2014-09-17 12:28:33 -07:00
Adam Moody
6c94fc4fd2 added mpileaks (finally!) 2014-09-17 12:28:00 -07:00
Todd Gamblin
881fdb66ae Merge branch 'develop' into features/fileutils 
Conflicts:
	lib/spack/spack/packages.py
 2014-09-16 23:53:44 -07:00
Todd Gamblin
a4c8e945c7 Some fixups for Adam's callpath and adept-utils packages. 
- Make spack packages RPATH *ALL* dependencies (i.e. the whole tree)
- prevents callpath link from finding wrong libelf -- always uses the one dyninst used.
 2014-09-16 21:59:46 -07:00
Adam Moody
656cf12cda add adeptutils and callpath packages 2014-09-16 16:50:54 -07:00
Todd Gamblin
ec44791aa3 Remove examples from default STAT build to avoid MPI dependence. 2014-09-05 10:52:43 -07:00
Todd Gamblin
eb5efed421 Merge branch 'features/postgresql' into develop 
- add spack cd command.
- Fix bug in modules hook

Conflicts:
	lib/spack/spack/cmd/stage.py
	lib/spack/spack/hooks/dotkit.py
	share/spack/setup-env.bash
 2014-08-21 22:59:39 -07:00
Todd Gamblin
e301d62332 Remove development TAU version from package. 2014-08-20 11:46:59 -07:00
Todd Gamblin
fa3b19000d update tau tarball 2014-08-11 22:47:24 -07:00
Todd Gamblin
6127b0baa6 new prototype TAU tarball from Kevin 2014-08-11 22:47:24 -07:00
Todd Gamblin
90cd0c7efa Add Kevin's experimental TAU version 2014-08-11 22:47:24 -07:00
Todd Gamblin
0b68d1292d Add package for openssl, have postgres use it. 
- Updated version wildcard to include [a-z]|alpha|beta
  to accommodate all the letter suffixes on openssl.
 2014-08-11 22:47:23 -07:00
Todd Gamblin
0740c576a7 Package for postgresql. 2014-08-11 22:47:23 -07:00
Todd Gamblin
c55041e9d4 Partial commit of more packages. 2014-08-04 07:54:22 -07:00
David Beckingsale
8738a3a88c Added LLVM package 2014-08-04 07:54:22 -07:00
Todd Gamblin
782e45e5b1 Fix up versions to match new version format, minor formatting. 2014-08-04 07:54:05 -07:00
Adam Moody
3779c78c00 adding libarchive 2014-08-04 07:54:05 -07:00
Adam Moody
a27e178ac2 add libcircle package 2014-08-04 07:54:05 -07:00
Adam Moody
712a2c3742 fileutils package 2014-08-04 07:54:04 -07:00
Adam Moody
6e7a7d127d adding dtcmp package 2014-08-04 07:54:04 -07:00
Adam Moody
3dd8e561b9 add lwgrp package 2014-08-04 07:54:04 -07:00
Adam Moody
741084faf4 add mvapich2 package to handle different compilers and variants 2014-08-04 07:54:04 -07:00
Todd Gamblin
d7a3c7e555 Fix up Matt's openss packages. 2014-08-03 12:57:09 -07:00
David Boehme
557ae64d51 Fix cube compiler configuration 2014-08-01 16:40:57 -07:00
Matthew LeGendre
b7fbc77bab Add sqlite to spack 2014-08-01 15:50:43 -07:00
Matthew LeGendre
d1de958daa Add libmonitor to spack. Still needs svn support for checkout 2014-08-01 15:48:59 -07:00
David Boehme
513b5aecf1 Improve compiler configuration in otf2 package 2014-08-01 10:16:08 -07:00
Todd Gamblin
61e2cb56a4 Got version 1.2.1 building, but 1.3 and onwards are different. 2014-08-01 09:09:57 -07:00
David Boehme
e377abc18c Add Score-P packages. 2014-07-31 17:51:23 -07:00
Todd Gamblin
e011b767fa Converting Luc's packages to the new version format. 2014-07-31 14:09:38 -07:00
Luc Jaulmes
5f3bcbfded Addind missing dependency nanos->extrae necessary for traces 2014-07-31 13:57:45 -07:00
Luc Jaulmes
853784d382 Added Paraver and dependencies, restricted Extrae to OpenMPI 1.6 2014-07-31 13:57:45 -07:00
Luc Jaulmes
5a4881c086 Adding Extrae and OmpSs with some of their dependencies, hwloc and PAPI. 
Extrae does not compile for latest versions of any MPI implementation.
 2014-07-31 13:57:44 -07:00
Luc Jaulmes
5dffa26711 first try for ompss build script 2014-07-31 13:51:37 -07:00
Todd Gamblin
1ad474f1a9 Allow per-version URLs instead of one single URL per package. 2014-07-30 23:30:07 -07:00
Todd Gamblin
5829b44648 Fix Jeff Keasler's issues and add parmetis package. 2014-07-09 01:37:24 -07:00
Todd Gamblin
5f8724650a Fix for SPACK-35: Fortran not working properly 
- Spack needed symlinks in env for fortran compilers.
- 'fc' is a bash bulitin, so can't use it for fortran compiler.
  - switched to 'f90' for this.

- mpich 3 builds with fortran now.
  - enabled shared libs in mpich package
 2014-07-09 01:28:23 -07:00
Todd Gamblin
295ffd8c50 Adding dotkit support to TAU. 
- New spack.hooks package
  - contains modules with pre and post install hooks

- New dotkit hook module
  - generates/removes dotkits on install/uninstall

- New spack use, spack unuse commands
  - use same syntax as install/uninstall

- New setup-env.bash script
  - Sets up path, dotkit support

- new spack dotkit command
  - used by script to parse specs, generate
    specs of installed pckages for dotkit file names
 2014-07-08 01:58:20 -07:00
Todd Gamblin
0551638944 Add TAU package and routines to filter files, fix sed calls. 
- TAU doesn't install to directories with '@' in the name.
- Need to fix up its scripts.
- routines to filter files as sed would, but using python regular expressions.
  - TAU package uses this.
 2014-07-02 23:24:10 -07:00
Todd Gamblin
c091c6d412 Make tests use mock compiler configuration. 
- makes sure tests don't fail on systems that don't have some compilers (e.g. clang).
- more control over specific test cases for compilers.
 2014-06-22 12:50:35 -07:00
Todd Gamblin
3653cfe6f0 Compiler support now uses configuration files. 
- no more need for compiler python files.

- Default compilers are found in user's environment and added
	to ~/.spackconfig automatically

- User can add new compilers by editing configuration file
 2014-06-22 12:50:34 -07:00
Todd Gamblin
b6f10dcdf3 Adding per-compiler python files 2014-06-22 12:50:09 -07:00
Todd Gamblin
f784757113 Initial ability to swap compilers. 
Fixes SPACK-16 and forces compiler script to build using compiler wrappers.

- works with gcc and clang on laptop.
 2014-06-22 12:49:34 -07:00
George Todd Gamblin
c66a6a16f9 Merge pull request #11 in SCALE/spack from features/tmux to develop 
# By David Beckingsale
# Via David Beckingsale
* commit 'e402a2e27cc2942a20916615c8eb06999c0320e6':
  Added tmux and supporting packages (ncurses and libevent)
 2014-06-05 17:40:00 -07:00
George Todd Gamblin
d89ee5795b Merge pull request #12 in SCALE/spack from features/samrai to develop 
# By David Beckingsale (1) and Todd Gamblin (1)
# Via David Beckingsale
* commit '2632bd97459e48404fe3fad0695219bf5bbb6f3f':
  Package builds and installs SAMRAI and deps with GNU and OpenMPI
  Preliminary SAMRAI package
 2014-06-05 17:36:13 -07:00
David Beckingsale
2cb06155a7 Added package for vim 2014-06-02 08:56:55 -07:00
David Beckingsale
2632bd9745 Package builds and installs SAMRAI and deps with GNU and OpenMPI 2014-06-02 08:36:45 -07:00
David Beckingsale
e402a2e27c Added tmux and supporting packages (ncurses and libevent) 2014-05-30 09:26:59 -07:00
Todd Gamblin
9b9fc86f6c Preliminary SAMRAI package 2014-05-29 08:54:02 -07:00
Gregory L. Lee
642778b6ff added patch to STAT to find MPICXX 2014-05-20 15:53:10 -07:00
Gregory L. Lee
e6e1b332be added mrnet-4.1.0 and stat-2.1.0 2014-05-07 08:41:03 -07:00
Todd Gamblin
703e611043 Make mrnet depend on boost. 2014-05-01 23:27:09 -07:00
Todd Gamblin
39d5a337ad Merge branch 'features/launchmon' into develop 2014-05-01 23:02:32 -07:00
Todd Gamblin
f092572672 Add Dong's 1.0.1 release URL to the launchmon package. 2014-05-01 23:01:19 -07:00
Todd Gamblin
a0c91791c5 SPACK-25: Add package for boost. Works on Linux currently. 2014-04-29 10:59:37 -07:00
Todd Gamblin
554f554dc2 Starting to get launchmon working. 2014-04-15 15:40:22 -07:00
Gregory L. Lee
d224718d96 copy config header files to prefix/include 2014-04-14 15:22:02 -07:00
Todd Gamblin
79c5dd0952 Fix SPACK-21: stage names are too long 
Stage names now hash dependencies like install prefixes.
 2014-04-13 17:32:22 -07:00
Todd Gamblin
81dc27bf41 Move packages and mock packages to /var/spack 2014-03-16 17:05:15 -07:00