Commit graph

32817 commits

Author SHA1 Message Date
Andrey Parfenov
b1e33ae37b
add info about devito and qe for intel env (#39357)
Signed-off-by: Andrey Parfenov <andrey.parfenov@intel.com>
2023-08-09 12:47:35 -04:00
Jordan Galby
c36617f9da
Fix package.py error handling bug (#39017) 2023-08-09 17:47:43 +02:00
dependabot[bot]
deadb64206
build(deps): bump black from 23.1.0 to 23.7.0 in /lib/spack/docs (#38982)
Bumps [black](https://github.com/psf/black) from 23.1.0 to 23.7.0.
- [Release notes](https://github.com/psf/black/releases)
- [Changelog](https://github.com/psf/black/blob/main/CHANGES.md)
- [Commits](https://github.com/psf/black/compare/23.1.0...23.7.0)

---
updated-dependencies:
- dependency-name: black
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-08-09 17:19:49 +02:00
Massimiliano Culpo
9eaa88e467
caliper: deprecate old versions (#39352) 2023-08-09 17:11:57 +02:00
Juan Miguel Carceller
bd58801415
dd4hep: fix setting LD_LIBRARY_PATH (#38015)
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-08-09 16:42:05 +02:00
Juan Miguel Carceller
548a9de671
py-setuptools-scm: add a git dependency (#36770)
* Add a git dependency

* Add the dependency only for building

* Change dependency to build and run

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-08-09 10:38:46 -04:00
Harmen Stoppels
8e7c53a8ba
package import: remove magic import line (#39183) 2023-08-09 14:28:06 +00:00
Tamara Dahlgren
5e630174a1
cpmd: convert to new stand-alone test process (#35744) 2023-08-09 15:59:51 +02:00
Cristian Di Pietrantonio
175a65dfba
libzmq: do not treat warnings as errors during compilation. (#39325)
The package won't compile with newer compilers because warnings
are converted to errors. Hence, disable such conversion.

Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 15:57:43 +02:00
Adam J. Stewart
39d4c402d5
Fix suffix of tab completion scripts (#39154) 2023-08-09 08:28:55 -05:00
Harmen Stoppels
e51748ee8f
zlib-api: new virtual with zlib/zlib-ng as providers (#37372)
Introduces a new virtual zlib-api, which replaces zlib in most packages.

This allows users to switch to zlib-ng by default for better performance.
2023-08-09 09:22:58 -04:00
Alec Scott
f9457fa80b
cxxopts: add v3.1.1 (#37977) 2023-08-09 14:31:10 +02:00
Alec Scott
4cc2ca3e2e
rclone: add v1.63.1 and remove previously deprecated versions (#39148) 2023-08-09 14:30:33 +02:00
Massimiliano Culpo
3843001004
Fixed bugs discovered in conflicts directives (#39338) 2023-08-09 14:20:49 +02:00
Cristian Di Pietrantonio
e24bb5dd1c
Changes the way MPICC is set (#39327) 2023-08-09 07:04:04 -05:00
Cristian Di Pietrantonio
f6013114eb
nwchem: make sure to link both single and double precision fftw libraries. (#39333)
With the previous version of the recipe I would get linking errors due
to missing `-lfftw3f`.

Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 14:03:15 +02:00
Martin Aumüller
bdca875eb3
protobuf: fix build for 3.21 on Centos 8 (#39162)
apply upstream patch
2023-08-09 13:44:05 +02:00
pabloaledo
af8c392de2
fq: add new package (#39205)
Signed-off-by: Pablo <pablo.aledo@seqera.io>
2023-08-09 06:23:44 -04:00
Jonathon Anderson
9aa3b4619b
containerize: ensure bootstrap images contain all system dependencies (#36818)
This also makes `spack bootstrap status` exit 1 if some dependency is missing
2023-08-09 09:46:59 +02:00
Cristian Di Pietrantonio
3d733da70a
idg: add new package (#39316)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 02:45:34 -05:00
Cristian Di Pietrantonio
cda99b792c
miniocli: add new package (#39318)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-09 03:43:29 -04:00
Gerhard Theurich
9834bad82e
esmf: specify build dependency on CMake when using internal ParallelIO (#39347) 2023-08-09 09:14:28 +02:00
Peter Scheibel
3453259c98
Spec versions: allow git. references for branches with / (#38239) 2023-08-09 09:07:04 +02:00
Adam J. Stewart
ee243b84eb
py-lightly: add v1.4.15 (#39348) 2023-08-09 09:01:41 +02:00
Adam J. Stewart
5080e2cb45
py-torchmetrics: add v1.0.3 (#39349) 2023-08-09 09:01:23 +02:00
Cristian Di Pietrantonio
f42ef7aea7
ior: add lustre variant (#39320)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:59:21 +02:00
Jon Rood
41793673d9
hypre: fix typo in --with-sycl option. (#39351) 2023-08-09 08:37:15 +02:00
Cristian Di Pietrantonio
8b6a6982ee
caliper: add KOKKOS variant. (#39312)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-09 08:35:56 +02:00
Cristian Di Pietrantonio
ee74ca6391
beast2: add dependency on libbeagle. (#39311)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:33:53 +02:00
Cristian Di Pietrantonio
7165e70186
chgcentre: fix compilation error by using explicit casting (#39315)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09 08:32:58 +02:00
Massimiliano Culpo
97d632a161
Push conflict between rocm and blt down to packages that actually use blt (#39339) 2023-08-09 07:53:17 +02:00
Alec Scott
571919992d
go: add v1.20.6 and v1.19.11, deprecate previous versions due to CVE-2023-29405 (#39149) 2023-08-08 16:38:21 -07:00
snehring
99112ad2ad
Update py-gtdbtk to 2.3.2 (#39296)
* fastani: adding version 1.34 and changing build_system

* py-gtdbtk: adding version 2.3.2

* fastani: adding requested changes

* py-gtdbtk: adding requested changes

* fastani: remove conditional
2023-08-08 18:33:56 -05:00
Paul Kuberry
75c70c395d
trilinos: Add version 14.4.0 (#39340) 2023-08-08 18:48:23 -04:00
Jen Herting
960bdfe612
[py-model-index] new package (#39301) 2023-08-08 17:20:37 -05:00
Jen Herting
97892bda18
[py-opendatalab] New package (#39302) 2023-08-08 17:19:18 -05:00
Jen Herting
cead6ef98d
[py-linkify-it-py] New package (#39305)
* [py-linkify-it-py] New package

* [py-linkify-it-py] Added version 1.0.3
2023-08-08 17:13:11 -05:00
eugeneswalker
5d70c0f100
e4s ci: add libpressio (#34222)
* e4s ci: add libpressio

* libpressio ~cuda, +cuda: add +mgard
2023-08-08 12:03:23 -07:00
Adam J. Stewart
361632fc4b
Ensure that all variants have a description (#39025)
* Ensure that all variants have a description

* Update mock packages too

* Fix test invocations

* Black fix

* mgard: update variant descriptions

* flake8 fix

* black fix

* Add to audit tests

* Relax type hints

* Older Python support

* Undo all changes to mock packages

* Flake8 fix
2023-08-08 09:29:49 -05:00
simonLeary42
6576655137
Name clash error message include hash of clashing packages (#39234)
Co-authored-by: Simon <simonleary@umass.edu>
2023-08-08 14:36:49 +02:00
Mikael Simberg
feb26efecd
hpx: add v1.9.1 (#39336) 2023-08-08 05:28:04 -04:00
Mikael Simberg
4752d1cde3
pika-algorithms: add v0.1.4 (#39335) 2023-08-08 05:23:10 -04:00
Paul Kuberry
a07afa6e1a
OpenMPI: require compilers for F77 and "modern" Fortran (#39266) 2023-08-08 11:10:27 +02:00
Adam J. Stewart
7327d2913a
ML CI: get more packages working on macOS (#39199) 2023-08-08 10:59:24 +02:00
Axel Huebl
8f8a1f7f52
C-Blosc2: add v2.10.1 (#39297)
This adds the latest C-Blosc2 release, the first to add CMake
CONFIG install files for easier downstream usage of the installed
library and CMake targets.
2023-08-08 10:08:12 +02:00
Carlos Bederián
eb8d836e76
aocc: add v4.1.0 (#39280) 2023-08-08 10:07:12 +02:00
Jen Herting
bad8495e16
parallel-hashmap: add new package (#39299) 2023-08-08 10:03:01 +02:00
Cristian Di Pietrantonio
43de7f4881
plumed: add v2.9.0, v2.8.3 (#39324)
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-08 09:59:03 +02:00
Hariharan Devarajan
84585ac575
cpp-logger: add new package (#39303) 2023-08-08 09:27:44 +02:00
Harmen Stoppels
86f9d3865b
Fix broken inode assertion (#39188) 2023-08-08 09:21:23 +02:00