Erik Schnetter
5d61888657
Correct Spack cc script
2015-12-17 10:13:39 -05:00
Todd Gamblin
6b6a82c147
Merge pull request #246 from LLNL/features/245-pdb-debug
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added option to enable pdb debug
2015-12-16 16:08:09 -08:00
Gregory L. Lee
107c0dd1a8
added option to enable pdb debug
2015-12-16 15:54:15 -08:00
Todd Gamblin
85c02dbe7b
Merge pull request #167 from mathstuf/hdf5-fix-mpi-dependency
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Hdf5 fix mpi dependency
2015-12-16 12:03:22 -08:00
Gregory Lee
9cab88071b
Merge pull request #239 from LLNL/bugfix/238-db-specs-not-concrete
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Fix #238 : Database specs need to be concrete when read in as well.
2015-12-16 11:37:51 -08:00
Todd Gamblin
9ac4c730fb
Merge pull request #241 from epfl-scitas/packages/gnuplot
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gnuplot : added package
2015-12-16 11:37:26 -08:00
Todd Gamblin
09b6e8e804
Merge pull request #242 from epfl-scitas/packages/gsl
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gsl : added package
2015-12-16 11:36:09 -08:00
Todd Gamblin
5b665226a2
Merge pull request #243 from nolta/patch-2
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minor comment tweak in modules.py
2015-12-16 11:33:56 -08:00
Mike Nolta
82aa366adf
minor comment tweak in modules.py
2015-12-16 11:43:07 -05:00
alalazo
cc9266e56c
gsl : added package
2015-12-16 12:45:58 +01:00
Massimiliano Culpo
d5018e77a3
gnuplot : modifications to build on RHLE 6
2015-12-16 09:32:48 +01:00
Todd Gamblin
2f9ee88408
Fix #238 : Database specs need to be concrete when read in as well.
2015-12-15 17:15:37 -08:00
alalazo
0a0cd4b9d3
gnuplot : added package
2015-12-15 16:29:36 +01:00
Todd Gamblin
dc3b54a681
Merge pull request #233 from LLNL/bugfix/206-value-error
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Fix #206 : need to make deps AND root concrete when read in.
2015-12-14 21:17:10 -08:00
Todd Gamblin
6e074a196a
Fix #206 : need to make deps AND root concrete when read in.
2015-12-14 21:06:32 -08:00
Todd Gamblin
3d39d035c1
Merge pull request #232 from LLNL/bugfix/package-cache-217
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Bugfix/package cache 217
2015-12-14 19:54:57 -08:00
Todd Gamblin
26b3d15ea0
Merge pull request #229 from epfl-scitas/packages/fftw
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fftw : added package
2015-12-14 10:12:22 -08:00
alalazo
1bfb16592b
fftw : added package
2015-12-14 16:31:02 +01:00
Todd Gamblin
afbd0e77d0
Make internal hash dep sort order match external one.
2015-12-11 16:47:34 -08:00
Todd Gamblin
3dd6cbc556
Fix #217 : update spec_dag test for new _cmp_key.
2015-12-11 13:07:20 -08:00
Todd Gamblin
6ee2eb21dd
Fix #217 : Use MUCH faster hashing, reduce number of DAG copies.
...
This changes the hash algorithm so that it does much less object
allocation and copying, and so that it is correct.
The old version of `_cmp_key()` would call `sorted_deps`, which would
call `flat_dependencies` to get a list of dependencies so that it
could sort them in alphabetical order. This isn't necessary in the
`_cmp_key()`, and in fact we want more DAG structure than that to be
included in the `_cmp_key()`.
The new version constructs a tuple without copying the Spec DAG, and
the tuple contains hashes of sub-DAGs that are computed recursively
in-place. This is way faster than the previous algorithm and reduces
the numebr of copies significantly. It is also a correct DAG hash.
Example timing and copy counts for the different hashing algorithms
we've tried:
Original (wrong) Spec hash:
```
106,170 copies
real 0m5.024s
user 0m4.949s
sys 0m0.104s
```
Spec hash using YAML `dag_hash()`:
```
3,794 copies
real 0m5.024s
user 0m4.949s
sys 0m0.104s
New no-copy, no-YAML hash:
```
3,594 copies
real 0m2.543s
user 0m2.435s
sys 0m0.104s
```
So now we have a hash that is correct AND faster.
The remaining ~3k copies happen mostly during concretization, and as
all packages are initially loaded. I believe this is because Spack
currently has to load all packages to figure out virtual dependency
information; it could also be becasue there ar a lot of lookups of
partial specs in concretize. I can investigate this further.
2015-12-11 12:40:27 -08:00
Todd Gamblin
7526a89463
Fix #217 : Make package cache use DAG hash instead of sorted deps.
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- Gets rid of last vestige of old-style specs.
- Uses new hashing for lookup
2015-12-11 02:17:17 -08:00
Ben Boeckel
6f978af77b
hdf5: update dependents to declare MPI support
2015-12-10 11:53:40 -05:00
Ben Boeckel
79a641ccf1
paraview: update hdf5 comment
2015-12-10 11:51:54 -05:00
Ben Boeckel
c5b7eba457
hdf5: make mpi support optional
2015-12-10 11:51:54 -05:00
Gregory L. Lee
3163d016db
install python files to libxml2 prefix instead of python prefix and ignore non-python files when activating
2015-12-09 14:10:05 -08:00
Todd Gamblin
f6eb000381
Merge pull request #225 from epfl-scitas/packages/git
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Adding https support in git even if system lib are missing
2015-12-09 10:59:47 -08:00
Nicolas Richart
31863c68d8
Adding curl and expat support to git for https repos
2015-12-09 11:00:33 +01:00
Todd Gamblin
e46af913be
Merge pull request #148 from PaulDapolito/glib-dep
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added zlib dependency to glib package specification
2015-12-09 01:44:00 -08:00
Todd Gamblin
8ebac18f50
Merge pull request #224 from epfl-scitas/packages/gdb
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gdb : added package
2015-12-09 01:35:04 -08:00
Todd Gamblin
537451f0b1
bugfix: doc build needed additional sys.path due to externals change.
2015-12-09 01:32:12 -08:00
Todd Gamblin
e009a910cc
Fix travis badge URL.
2015-12-09 01:28:54 -08:00
Todd Gamblin
c41b9b7ddc
Change github.com/scalability-llnl to github.com/llnl everywhere.
2015-12-09 01:24:15 -08:00
Todd Gamblin
b8bb24d4bf
Update README.md and LICENSE with new github.com/llnl URLs
2015-12-09 01:10:14 -08:00
alalazo
4d5eb4ce7d
gdb : added package
2015-12-09 09:06:10 +01:00
Todd Gamblin
0356ba34a0
Merge pull request #223 from alalazo/fixes/gcc_sysroot_and_objdir
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Fix for #177
2015-12-08 10:15:40 -08:00
alalazo
c5b9732aed
Should fix #177
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gcc : changed objdir to something out of srcdir and added '--with-sysroot=/'
binutils : added '--with-sysroot=/'
2015-12-08 14:06:04 +01:00
Todd Gamblin
e7ab8d476d
Merge pull request #219 from eschnett/eschnett/gmp
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Update gmp to 6.1.0
2015-12-07 16:46:44 -08:00
Todd Gamblin
6bc86a6baa
Merge pull request #220 from eschnett/eschnett/mpc
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Update mpc to 1.0.3
2015-12-07 16:46:32 -08:00
Todd Gamblin
b0434fa486
Merge pull request #221 from davidbeckingsale/features/cleverleaf-boost
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Update CleverLeaf package to use Boost and fix SAMRAI MPI usage
2015-12-07 16:46:15 -08:00
Todd Gamblin
fcabf0ef0d
Merge pull request #222 from mplegendre/bugfix/github-203-gcc5-builds
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Fix issue with gcc 5.x not building on RHEL6
2015-12-07 15:55:21 -08:00
Matthew LeGendre
f8e046bb33
Fix issue with gcc 5.x not building on RHEL6
2015-12-07 15:49:47 -08:00
Gregory L. Lee
1a22a507d6
mesa requires +python variant of libxml2
2015-12-07 15:36:36 -08:00
David Beckingsale
36272c8136
Fix MPI selection in SAMRAI and remove narrow dependency specification
2015-12-07 14:58:16 -08:00
David Beckingsale
77bf133cd2
Update CleverLeaf package to use Boost and fix SAMRAI MPI usage
2015-12-07 14:33:31 -08:00
Erik Schnetter
aff95ee587
Update mpc to 1.0.3
2015-12-05 11:23:40 -05:00
Erik Schnetter
29537b9991
Update gmp to 6.1.0
2015-12-05 11:21:47 -05:00
Gregory L. Lee
5891847ae4
added py-pillow and updated py-basemap to depend on it
2015-12-03 15:35:28 -08:00
Gregory L. Lee
a56c7e5f1a
Merge branch 'develop' of https://github.com/scalability-llnl/spack into develop
2015-12-03 15:02:49 -08:00
Gregory L. Lee
0f4efc018d
updated package versions
2015-12-03 15:01:44 -08:00
