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Author SHA1 Message Date
Todd Gamblin
098af17971 Merge pull request #1208 from paulhopkins/bugfix/github1196-specify-preferred-variants 
Bugfix/github1196 specify preferred variants
 2016-07-21 08:36:19 -07:00
Todd Gamblin
5745ede31d Merge pull request #1328 from suraia/fix-recursive-module-load 
Fix recursive module loading
 2016-07-21 08:34:36 -07:00
Todd Gamblin
0b1d03abe6 Merge pull request #1327 from suraia/update-load-documentation 
Update documentation for recursive module loading
 2016-07-21 08:33:40 -07:00
Paul Hopkins
00280936da Flake8 fixes to ensure qa tests pass 2016-07-21 13:12:58 +01:00
Paul Hopkins
480fe9cb9a Re-add documentation for variant preferences 2016-07-21 12:32:00 +01:00
Paul Hopkins
bd91dd9d6d Allow users to supply preferred variants via packages.yaml 2016-07-21 12:32:00 +01:00
Michael Kuhn
732c24f603 Fix recursive module loading. 2016-07-21 13:15:53 +02:00
Michael Kuhn
4e1f86881a Update documentation for recursive module loading. 2016-07-21 13:15:10 +02:00
Gregory Lee
07d4c6cf0b Merge pull request #1205 from glennpj/psxe 
Setup environment for Intel Parallel Studio
 2016-07-20 21:14:34 -07:00
Glenn Johnson
ead1b93f75 MPI related changes 
- Redid the code for setting the itac symlink for the cluster edition.
- Removed the *PATH variables for MPI to avoid a conflict with other MPI
  environment modules.
- Added missing test for `+all` when checking variants.
 2016-07-20 20:03:05 -05:00
Glenn Johnson
0be4c7dfbd Changes as discussed in PR review 
- removed unneeded entry for `debugger/gdb/intel64_mic`
- set `+mpi` directory name to impi
 2016-07-20 20:03:05 -05:00
Glenn Johnson
5e5e36a659 Fix flake8 errors. 2016-07-20 19:54:35 -05:00
Glenn Johnson
16f67b5bb1 Setup environment for Intel Parallel Studio 
Set up the environment for the Intel compilers and tools. This commit
does the following:

- Unset variables that were incorrect from the auto guess prefix
  inspections.
- Add a RemovePath environment_modifications_formats for dotkit.
- Set the module environment variables appropriate for the different
  variants.
- Change the component logic so that the '+all' variant works. It was
  getting split by letter and leaving COMPONENTS empty.
- Added a variant checking function.
- Added NONRPM_DB_DIR to the silent.cfg so that the product database
  goes to the installation directory.
- With the product database in prefix the code to remove the product
  database file from the home directory is no longer needed and was
  removed.
- Reformat the 'tools' variant description.

There are probably more variables needed for the '+tools' for the
'professional' product version but I do not have access to that.
 2016-07-20 19:54:35 -05:00
Todd Gamblin
e389afedaa Merge pull request #1323 from glennpj/rlib 
Set environment variables for R
 2016-07-20 15:43:26 -07:00
Todd Gamblin
b9c79824a2 Merge pull request #1313 from sknigh/gnu-tools 
Added packages for GNU tools screen, datamash, and parallel
 2016-07-20 15:38:55 -07:00
Todd Gamblin
0777d3a5ba Merge pull request #1326 from mwilliammyers/package-openexr 
openexr : Add new package
 2016-07-20 15:35:36 -07:00
Mitchell Devlin
2344ffd0c7 add libxsmm package 2016-07-20 16:36:31 -05:00
Glenn Johnson
0c75174ec3 Fix indent/flake8 error. 2016-07-20 15:56:20 -05:00
mwilliammyers
e973adf84b openexr : Add new package 2016-07-20 14:49:03 -06:00
Glenn Johnson
f9137f606f Set environment variables 
This commit adds `setup_environment` to export the libraries and
headers.

Fixes #1314.
 2016-07-20 15:37:31 -05:00
Todd Gamblin
8856a226c7 Merge pull request #1277 from mathstuf/special-deptypes 
deptypes: support special deptypes by string
 2016-07-20 13:15:57 -07:00
Todd Gamblin
d8acd41ba1 Merge pull request #1321 from mwilliammyers/package-ilmbase 
ilmbase : Add new IlmBase package
 2016-07-20 13:13:21 -07:00
Todd Gamblin
8efbec3c0b Merge pull request #1292 from eschnett/eschnett/hdf5-default-1.10 
Make newest HDF5 release the default version
 2016-07-20 12:57:45 -07:00
Todd Gamblin
4c7c9f4ff5 Merge pull request #1303 from adamjstewart/features/armadillo 
Updates to Armadillo package
 2016-07-20 12:56:41 -07:00
Todd Gamblin
cd4f429f72 Merge pull request #1319 from LLNL/cray-linker 
Cray linker
 2016-07-20 12:56:01 -07:00
Samuel Knight
24c14ff7a8 Added gnu packages datamash, parallel, and screen 2016-07-20 19:53:14 +00:00
Gregory Becker
eda1176ba7 added package as argument to setup_platform_environment 2016-07-20 12:26:31 -07:00
mwilliammyers
c9f4e8ce5a ilmbase : Add new IlmBase package 2016-07-20 13:13:47 -06:00
Gregory Becker
6983c1d30d Documented linker default 2016-07-20 12:04:00 -07:00
Gregory Becker
412618d531 fixed flake errors 2016-07-20 11:52:16 -07:00
Gregory Becker
7db4170062 removed commented-out code 2016-07-20 11:36:47 -07:00
Gregory Becker
f4fb9a0771 Set default link type to dynamic on cray. Includes hooks for platform-based environment changes 2016-07-20 11:35:13 -07:00
Todd Gamblin
79e066d53c Merge pull request #1315 from LLNL/improved-cray-detection 
Improved cray detection
 2016-07-20 11:11:56 -07:00
Gregory Becker
106147716a fixed flake errors 2016-07-20 11:00:56 -07:00
Gregory Becker
0d18f7249c fixed flake errors 2016-07-20 10:50:18 -07:00
Gregory Becker
26d1ddc176 Improved cray_xc detection bug fix 2016-07-20 10:28:38 -07:00
Gregory Becker
4c506b36c5 Improved cray_xc detection 2016-07-20 10:25:07 -07:00
Todd Gamblin
4434f482c0 remove FIXMEs 2016-07-20 09:48:54 -07:00
Todd Gamblin
3def8ef60e Merge branch 'cdo' of https://github.com/robertdfrench/spack into robertdfrench-cdo 2016-07-20 09:48:01 -07:00
Todd Gamblin
20584ab084 Merge pull request #1302 from robertdfrench/adios-url 
Get adios from github, not NCCS
 2016-07-20 09:47:23 -07:00
Todd Gamblin
7c28338d60 Merge pull request #1301 from robertdfrench/silver-searcher 
Silver Searcher 0.32 is out
 2016-07-20 09:47:12 -07:00
Todd Gamblin
17a63c9646 Merge pull request #1284 from eschnett/eschnett/py-h5py.2 
Declare dependency of "py-h5py +mpi" on "py-mpi4py"
 2016-07-20 09:45:54 -07:00
Todd Gamblin
01a361d637 Merge pull request #1288 from LLNL/features/cray_compiler_names 
Let packages call use_cray_compilers() in install to get , etc set to…
 2016-07-20 09:45:36 -07:00
Todd Gamblin
7f20678969 Merge pull request #1291 from eschnett/eschnett/netcdf-4.4.1 
Update NetCDF to version 4.4.1
 2016-07-20 09:34:14 -07:00
Erik Schnetter
69e36c9821 Ensure that per-4.4.1 NetCDF doesn't use HDF5 1.10 2016-07-20 11:25:46 -04:00
Todd Gamblin
c503b43e38 Merge pull request #1311 from adamjstewart/features/licenses 
Re-ignore licenses directory
 2016-07-20 07:14:47 -07:00
Adam J. Stewart
83330d2b59 Re-ignore licenses directory 2016-07-20 08:50:32 -05:00
Todd Gamblin
6501cba5a7 Merge pull request #1309 from LLNL/features/spack-defaults 
Add "default" configuration scope.
 2016-07-19 23:48:12 -07:00
Todd Gamblin
26480f14f9 Add "default" configuration scope. 
- Default scope is versioned with spack and can be overridden by site
  or user config.

- Default scope provides sensible default concretization preferences
  for all of Spack.

- per-platform concretization scope can be added later (to force a
  particular MPI on, e.g., Cray systems)
 2016-07-19 17:10:17 -07:00
Robert D. French
6b0fb476ab Draft CDO 2016-07-19 15:57:55 -07:00