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Author SHA1 Message Date
Glenn Johnson
7c87ebeb91
Some improvements to gate package (#22656) 
- set constraint for geant4 to version 10.6 as gate does not work with
  geant-10.7+
- set GATE_USE_ITK: Although RTK is built under ITK, there are some ITK
  macros that need to be set explicitly.
 2021-04-07 12:13:05 -05:00
Sergey Kosukhin
253c0d0ebb
hdf5: avoid compilation with -I/usr/include (#22808) 2021-04-07 09:49:16 -07:00
Vasily Danilin
ccc90e3a79
Integrate oneAPI 2021.2.0 release (#22821) 2021-04-07 09:44:12 -07:00
Robert Cohn
c8b4414230
[oneapi] fix mkl deps, externally installed, and docs (#22607) 2021-04-07 10:31:08 -06:00
Evili del Rio
6c16f5c5d5
Py py spy add libunwind 1 (#22827) 
* Add missing libunwarp dependency

py-py-spy fails to build with:
  = note: /bin/ld: cannot find -lunwind
          /bin/ld: cannot find -lunwind-ptrace
          /bin/ld: cannot find -lunwind-x86_64
          collect2: error: ld returned 1 exit status

* Correct libunwind instead of libunwarp

* Change libunwind dependency to unwind
 2021-04-07 16:10:08 +00:00
Evili del Rio
cfbb4abb79
Update package.py (#22826) 2021-04-07 10:44:02 -05:00
Mosè Giordano
ad3eb98c4b
libblastrampoline: Add version 3.0.4 (#22830) 2021-04-07 15:33:27 +00:00
Cameron Rutherford
c4a83aa22c
Create ExaGO Package (#22734) 
Co-authored-by: Asher Mancinelli <asher.mancinelli@pnnl.gov>
 2021-04-07 13:48:46 +02:00
Julius-Plehn
41ed95dbdf
iozone: adds 3.491 and fixes permissions (#22817) 2021-04-07 12:15:21 +02:00
Severin Strobl
b7d72e26bb
otf2: patch for uninitialized variable (#22719) 
As pointed out in https://github.com/STEllAR-GROUP/hpx/issues/5239,
there is an issues in OTF2 <=2.2 where a variable is not properly
initialized. As currently no release of OTF2 is available fixing this,
the patch should be applied.
 2021-04-07 11:55:24 +02:00
Vasileios Karakasis
58edc361be
ReFrame: add v3.5.1 and v3.5.2 (#22820) 2021-04-07 09:06:34 +00:00
Scott McMillan
51ac05483d
Update packages for NVIDIA HPC SDK 21.1 (#21975) 
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
 2021-04-07 09:41:43 +02:00
arjun-raj-kuppala
c188575cfe
roctracer-dev: add v4.1.0 (#22812) 2021-04-07 09:26:01 +02:00
Harmen Stoppels
3caf531f04
Add libxc 5.1.3 (#22816) 2021-04-07 09:23:26 +02:00
Brian Van Essen
4d417dcf2d
lbann: remove the specification of the high performance linkers (#22818) 
Allow the user to put them on the command line.
 2021-04-07 09:14:06 +02:00
archxlith
97d237dafa
py-scikit-image: add new version (#22363) 
* [py-scikit-image] Added py-setuptools back into depends_on. Otherwise it is putting skimage in scikit_image-version-pyX.Y-arch.egg dir under site-packages

* [py-scikit-image] Added latest version

* [py-scikit-image] Added py-numpy version dependency when package version greater than 0.18

* [py-scikit-image] Updates to python dependency

* Fix typo

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2021-04-07 03:32:38 +00:00
Adam J. Stewart
dbdb72d0ea
py-statsmodels: add v0.12.2 (#22620) 2021-04-06 14:44:33 -07:00
Robert Mijakovic
50f5ec7abf
valgrind: add version 3.17.0 (#22752) 2021-04-06 13:57:48 -07:00
iarspider
0166f7db08
New package: Oracle instant client (#22797) 2021-04-06 13:56:33 -07:00
darmac
23422dcc59
tcpdump: add version 4.99.0 (#22803) 2021-04-06 13:33:43 -07:00
Xavier Delaruelle
9505af42ff
environment-modules: add version 4.7.1 (#22811) 2021-04-06 20:23:01 +00:00
Desmond Orton
838bba70c6
salmon: New patch (#22686) 2021-04-06 12:37:32 -07:00
Glenn Johnson
442241d477
new package: py-python-box (#22814) 2021-04-06 14:36:53 -05:00
Harmen Stoppels
a989521052
Squashfuse: Enable or disable static and shared libs, and allow min size builds too, useful for appimages (#22669) 
* Enable or disable static and shared libs, and allow min size builds too, useful for appimages

* Fix master version
 2021-04-06 14:00:32 -05:00
Harmen Stoppels
bbc666a1d2
meson: added variants, changed defaults for the build system (#22715) 
- Use debugoptimized as default build type, just like RelWithDebInfo for cmake
- Do not strip by default, and add a default_library variant which conveniently support both shared and static
 2021-04-06 17:57:31 +02:00
Jen Herting
a4c3bc9893
New package: py-ilmbase (#22783) 
* [py-ilmbase] created template

* [py-ilmbase] added dependencies and configuration options as necessary

* [py-ilmbase] added homepage and description removed fixmes

* [py-ilmbase] shortened lines for flake8
 2021-04-06 09:55:40 -05:00
Robert Mijakovic
b6668a1146
paraview: adds new cuda target, ampere (#22750) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
 2021-04-06 16:54:35 +02:00
Seth R. Johnson
1ed44f20f2
m4: force path where to look for autoconf (#22765) 
Uses the M4 environment variable
 2021-04-06 10:21:38 +00:00
Michael Kuhn
85cdb3d250
xfsprogs: add 5.11.0 and fix build with newer versions of gcc (#22665) 
xfsdump depends on an older version of xfsprogs that does not build with
recent versions of gcc.
 2021-04-06 11:21:48 +02:00
ravil-mobile
8b4cf24ba7
hipsycl: add v0.9.1 which partially implements SYCL 2020 standard (#22770) 
Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
 2021-04-06 11:21:05 +02:00
Gregory Lee
5b1fa20f87
stat: deprecate versions prior to 4.0 (#22650) 2021-04-06 11:16:54 +02:00
Sergey Kosukhin
47c13bc6ca
cdo: help libtool to find the correct paths to libraries (#22670) 
- Add a maintainer
- Help libtool to find the correct paths to libraries
- Handle externals from system directories
- Enable eccodes for older versions
 2021-04-06 11:15:29 +02:00
Gilles Grospellier
fbed5d1eb5
dotnet-core-sdk: add v5.0.4 and v3.1.13. (#22217) 2021-04-06 03:06:50 -06:00
Glenn Johnson
a586b8df20
itk: add v5.1.2 (#22655) 2021-04-06 11:03:53 +02:00
Harmen Stoppels
d2bf74242e
libtree: add v1.2.1 (#22795) 2021-04-06 09:01:08 +00:00
Thomas Gruber
cac8646e1c
likwid: add v5.1.1 (#22672) 2021-04-06 10:59:38 +02:00
Robert Mijakovic
f9837d8c66
qwt: add v6.1.6 (#22713) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
 2021-04-06 10:45:09 +02:00
Robert Mijakovic
1424dc6147
rdma-core: add v34.0 (#22710) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
 2021-04-06 10:44:46 +02:00
Axel Huebl
710d096b43
Update mailmap (#22739) 2021-04-06 10:32:35 +02:00
darmac
239be21391
libpcap: add v1.10.0, v1.9.1 (#22741) 2021-04-06 10:31:15 +02:00
darmac
4668f34682
capnproto: add v0.8.0 (#22743) 2021-04-06 10:23:49 +02:00
Harmen Stoppels
0fcda35a71
spack location: fix usage without args (#22755) 2021-04-06 08:17:58 +00:00
Robert Mijakovic
8c5f4c9c94
spark: add v3.1.1, v3.0.2, v3.0.2, v2.4.7 (#22753) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
 2021-04-06 10:14:28 +02:00
Tiziano Müller
d0a2e354bb
anaconda3: add v2020.11 (#22576) 2021-04-06 10:02:57 +02:00
Jen Herting
91bd16a850
r-assertive-base: new package (#22780) 
Co-authored-by: Alex C Leute <aclrc@rit.edu>
 2021-04-06 09:46:06 +02:00
Amiya Maji
7e6386803e
fltk: add explicit dependency on gl and a variant to activate it (#22761) 
* The fltk package can build libraries with opengl support. By default, the configure script looks for opengl headers in the sytem include paths. If 'devel' packages have not been installed on the system it omits the 'ftlk_gl.so' library. This can break packages like 'octave' which expects 'fltk' to have opengl support and looks for the library 'fltk_gl'.

Make opengl support explicit in fltk by adding a dependency on 'gl' and adding a new variant of the same name 'gl' (default On).

With these modifications 'fltk_gl' and 'octave' build successfully on CentOS8.

The default behavior is to always enable opengl.

https://www.fltk.org/doc-1.3/intro.html
 2021-04-06 09:45:00 +02:00
Greg Sjaardema
8dab9f0a81
seacas: add v2021-04-05 (#22784) 2021-04-06 09:41:11 +02:00
Andrew W Elble
a57f56c5b9
openmpi: allow to build with ^slurm ~pmi for >3.0.0 with PMIx (#22086) 2021-04-06 09:40:33 +02:00
Brian Van Essen
023524365c
hydrogen, lbann: forward the CXXFLAGS to the HIP_HIPCC_FLAGS variable. (#22744) 2021-04-06 09:38:37 +02:00
Harmen Stoppels
802f4d9ffa
zstd: add v1.4.9, switch to cmake to configure more easily (#22668) 
Also:
- Add variants to control the build
- Add a maintainer
- Add master version
 2021-04-06 09:37:08 +02:00