Commit graph

6566 commits

Author SHA1 Message Date
Levi Baber
535b09d811 singularity: new version 2018-08-31 08:47:24 -07:00
Michael Sternberg
a86f22d755 Intel prefixes (#7469)
Consolidate prefix calculation logic for intel packages into the
IntelPackage class.

Add documentation on installing Intel packages with Spack an
(alternatively) adding them as external packages in Spack.
2018-08-29 21:09:34 -07:00
Mark W. Krentel
e860307c31 binutils: add variant 'nls' for native language support (#9124)
Add variant 'nls' for native language support with default True.
The default inside binutils was always on, but this gives a way of
turning it off, if desired.

Adjust the dependencies.  Flex is never used for a one-time build.
Bison and m4 should not be needed, except that prior to rev 2.30, gold
did not include its generated files, so bison is needed when +gold.

Drop configure option --enable-interwork.  This option does not exist.
2018-08-29 20:32:41 -07:00
Adam J. Stewart
1383834d15
Add MDB driver support to GDAL (#8614) 2018-08-29 12:35:56 -05:00
Andreas Baumbach
1e0c337fe9 New package: NEST Simulator (#9092) 2018-08-29 13:30:29 -04:00
Abhinav Bhatele
23f89ccc0b ROSS package: fix build error and add v7.0.0 (#9128) 2018-08-29 13:13:50 -04:00
Andrew Gaspar
ebf21d1d87 Adds a package for optional-lite header-only library (#9117) 2018-08-29 18:14:59 +02:00
Christoph Junghans
5de47da740
flecsi: fix build (#9129) 2018-08-29 09:23:02 -06:00
Andrew Gaspar
f540b2ca1b Adds a package for span-lite header-only library (#9118) 2018-08-29 11:01:35 +02:00
Geoffrey Oxberry
eeaa924a6f hdf5@1.10.3: new version (#9121) 2018-08-29 10:58:24 +02:00
Geoffrey Oxberry
c7a8b47e74 ipopt@3.12.10: new version (#9120) 2018-08-29 10:58:05 +02:00
Massimiliano Culpo
cf807f6fd1
New package: channelflow (#9111) 2018-08-29 10:54:34 +02:00
Douglas Duckworth
1a7e9e58d0 added star 2.6.1a (#9103) 2018-08-29 07:34:04 +02:00
Michael Kuhn
3d7457edde go: Update to 1.11 (#9101) 2018-08-29 07:00:40 +02:00
Andrew Gaspar
168c6d9428 Add string-view-lite package for header only library (#9125) 2018-08-29 06:54:20 +02:00
Christoph Junghans
cefc1069e6 gasnet:version bump (#9127) 2018-08-29 06:48:52 +02:00
Jannek Squar
b78ccb74d8 atk package: hotfix #9099 (#9102)
Adds explicit python3 dependency for meson
2018-08-28 16:35:30 -04:00
Adam J. Stewart
be42b8df19 Java updates: new versions, classpath, and JAVA_HOME (#8613)
This PR includes the following changes:

* Added JDK 10
* Changed the JDK version numbers according to the consensus reached
  in #2284
* Added spec['java'].home and spec['java'].libs, similar to #3367
  (JDK and IcedTea)
* Added a check to prevent people from installing JDK on macOS
* Set CLASSPATH for packages depending on Java (JDK and IcedTea)
* Add TODO for extending virtual packages (not currently possible)
* Add TODO for adding Java dependents to views
* Add TODO for packages which extend multiple packages (e.g. Java
  and Python)
2018-08-28 14:35:13 -04:00
Douglas Duckworth
04c25ac468 perl-star-fusion package: update latest version (#9104) 2018-08-28 13:22:18 -04:00
Sasha Nícolas
2fdfa46735 dyninst: add dependency on libiberty (#8806)
* Adding dependency of libiberty to Dyninst package configuration.
* Now it depends on libiberty package and not binutils.
2018-08-27 14:34:05 -07:00
Alan Williams
c56992587e Add line in trilinos/stk configuration to enable stk_ngp package. (#9082)
The Trilinos/stk configuration is pretty Nalu specific right
now (and is acknowledged as such in a comment in package.py), and
this commit enables a module that Nalu will be needing.
2018-08-26 19:49:35 -05:00
Levi Baber
bba5967dcc r-goseq: new package (#8939)
* r-goseq: new package

* r-goseq: git not url

* r-goseq: adding packages needed at runtime

* r-goseq: package type

* r-goseq: dep types

* r-goseq: one more
2018-08-26 19:45:23 -05:00
lingnanyuan
7c06492d94 braker: add new version 2.1.0 (#8946)
* braker: add new version 2.1.0

* Set verison in descending order.

* Update URL.

* url

* braker: change url format.
2018-08-26 19:44:53 -05:00
TZ
2ae1bfd283 patch for OF.com@18.06 to correctly find KAHIP (#8982)
- OpenFOAM-v1806/wmake/scripts/have_kahip must check
  $KAHIP_ARCH_PATH instead of $METIS_ARCH_PATH to detect the KAHIB
  library
- use a local patch file until the issue is hopefully fixed upstream
2018-08-26 19:44:06 -05:00
Adam J. Stewart
cc01e89d6b
Update to latest version of pytest and dependencies (#9087)
* Update to latest version of pytest and dependencies

* Fix bug in installation tests
2018-08-25 14:12:46 -05:00
Todd Gamblin
3c292de6bd bugfix: 'submodules' attribute should imply git fetch
- 'submodules' wasn't properly declared as an optional attribute for git
  fetcher

- add it and add a test.
2018-08-25 10:20:39 -07:00
Hadrien G
a7f3fa01d5 new package: GSL - C++ Guideline Support Library (#9091)
Since "GSL" is a highly overloaded acronym, the package name is "cppgsl".
2018-08-24 17:45:18 -04:00
Hadrien G
afff196a06 Update the pocl package (#9090)
* Update the pocl package

* Use url_for_version

* Clarify hwloc version requirements

* Apply hwloc dependency suggestion
2018-08-24 12:26:17 -05:00
Hadrien G
b7e4be4d29 Add new CLHEP releases and move to sha256 hashes (#9089) 2018-08-24 09:49:38 -05:00
Hadrien G
4fbcecd0cd range-v3 package (#9093)
* Add first version of a Range-v3 package

* Add C++ standard variant to range-v3 package
2018-08-24 09:41:25 -05:00
Matthias Diener
95ca99bbdd htop: add version 2.2.0 (#9086) 2018-08-23 18:50:01 -05:00
Matthias Diener
30cbca2c32 bison: add new version (#9085) 2018-08-23 17:00:26 -05:00
Christoph Junghans
ca2e1e9019 lammps: add v20180822 (#9081) 2018-08-23 12:17:27 -05:00
Brian Spilner
87c2214b02 add cdo releases 1.9.4 and 1.9.5 (#9079) 2018-08-23 10:27:35 -05:00
Michael Kuhn
983957f7c0 mvapich2: Use rdma-core for mrail and nemesis*ib* fabrics (#9072) 2018-08-23 07:32:46 -05:00
Daniel Topa
05c4ff4e92 Open mpi add v3.1.2 (#9078)
* Add latest release 3.0.2
https://www.open-mpi.org/software/ompi/v3.0/:x

Signed-off-by: Daniel Topa <dantopa@lanl.gov>

* 1. Added correct md5 sum for Open MPI v3.1.1 (https://www.open-mpi.org//software/ompi/v3.1/)
2. Made v3.1.1 the default version
3. Added libmpiso versions for v3.1.1 and 3.0.2

Signed-off-by: Daniel Topa <dantopa@lanl.gov>

* Added Open MPI v2.14 to version list; Tested build; Added libmpi.so version

Signed-off-by: Daniel Topa <dantopa@lanl.gov>

* Open MPI 3.1.2 built and tested

Signed-off-by: Daniel Topa <dantopa@lanl.gov>
2018-08-22 23:17:48 -05:00
Sam Gutiérrez
8c89e67669 libquo: Packaging updates. (#9076)
* libquo: Packaging updates.

This commit accomplishes a few things:
* Changes distribution fetch source
* Removes a deprecated version (1.2.9)
* Changes dependencies based on version type
* Adds a custom autoreconf stage when using the 'develop' version,
  omitting this step when building from a distribution

* Reintroduce v1.2.9.
2018-08-22 23:17:15 -05:00
Michael Kuhn
a6826a7a2d glib: Add 2.56.2 (#9071)
This should finally fix build failures on RHEL6-based distributions.
Also fix the patch to apply to the correct versions and distributions.
2018-08-22 14:21:54 -05:00
Sam Gutiérrez
66971f6ac8 libfabric: Add develop version option. (#9074)
Add develop version option to libfabric, conditionally bringing in
additional build dependencies: m4, autoconf, automake, libtool.
2018-08-22 14:21:30 -05:00
Michael Kuhn
0b2a4aea6d leveldb: Fix header installation (#9069)
leveldb headers are typically included via <leveldb/c.h>. The migration
to install_tree in 73c978ddd9 caused the
headers to end up in prefix.include, which breaks existing applications.
2018-08-22 09:46:11 -05:00
Levi Baber
8b092c242f r-genefilter: new version (#9063)
* r-genefilter: new version

* r-genefilter: fix version in dep
2018-08-22 09:45:56 -05:00
Levi Baber
0b47741400 r-annotate: new version (#9061) 2018-08-22 09:45:11 -05:00
Levi Baber
51b3edc4f4 r-geneplotter: new version (#9060) 2018-08-22 09:44:48 -05:00
Levi Baber
96913f1876 r-qvalue: new version (#9059) 2018-08-22 09:44:21 -05:00
Levi Baber
b474e0bdc9 r-rtracklayer: new version (#9056) 2018-08-22 09:43:25 -05:00
Levi Baber
bfe58cd4a9 r-genomicfeatures: new version (#9057) 2018-08-22 09:41:38 -05:00
Levi Baber
711c3d7d69 r-delayedarray: new version (#9053) 2018-08-22 09:39:52 -05:00
Levi Baber
9a98f45064 r-genomicranges: new version (#9052) 2018-08-22 09:39:23 -05:00
Levi Baber
c0aabecbb1 r-genomeinfodb: new version (#9051) 2018-08-22 09:38:28 -05:00
Levi Baber
a38e7c783d r-genomeinfodbdata: new version (#9050) 2018-08-22 09:37:56 -05:00