Commit graph

9489 commits

Author SHA1 Message Date
Rao Garimella
52d0940b42 Variant for enabling tests, versions, cleanup (#13882)
* add variant for enabling testing

* enable tests and clean up other options

* add numbered versions

* updates to avoid enable_tests variant; correct versioning

* fixes for style

* appropriate partitioners are enabled if 'all' is specified - so no need to check in spec

* define url so spack knows how to fetch the tar.gz files for different versions
2019-11-26 10:48:34 -06:00
Vivek Kale
07cda58bcc Updating package for SOLLVE (#12607)
* Add SOLLVE package with Shintaro's help on rebasing.

Co-authored-by: Vivek Kale <vivek.lkale@gmail.com>

* sollve: reflect suggestions by @adamjstewart

* sollve: update target detection

Copied from llvm/package.py.

* sollve: fix a few things

- url -> git
- remove git in version()
- explicit cmake options in else clauses
- add newlines for better readability
2019-11-26 10:45:27 -06:00
Hector Martinez-Seara
ad2cc38f22 Py-pymol package has been updated to the latest version (#13764)
* Added new package libmmtf-cpp required by py-pymol

* Added SPDX-License-Identifier to MIT

*  Updated py-pymol to version 2.3.0

* py-pymol: Added mising py-pmw dependency

* py-pymol: flake8 minor change

* py-pymol: Added patch for apbstools_tcltk8.6

This patch is borrowed from archlinux
https://bugs.archlinux.org/task/39526

* libmmtf-cpp: flake8 compliance

* libmmtf-cpp: flake8 compliance

* libmmtf-cpp: change license to  (Apache-2.0 OR MIT) when refering to the MIT license

* libmmtf-cpp: Added header text about license as in examples

* py-pymol: removed unnecesary dependency mesa-glu

* py-pymol: removed unnecesary patch

* py-pymol: Removed empty line at the end of the file to comply with flake8.
2019-11-26 10:42:39 -06:00
Christoph Junghans
7d3d03dea9 cmake: add support for xlf and ninja (#13796) 2019-11-26 11:29:25 -05:00
darmac
577391e62b httperf: added new package (#13875) 2019-11-26 13:38:48 +01:00
Joe Koning
c171ff6335 Add the py-coloredlogs package (#13852)
* Add the py-coloredlogs package

* Remove extraneous line.

* Remove dashed line.

* Add version for humanfriendly dep and build to type.

* Change source url to use pypi.
2019-11-25 16:56:34 -06:00
Hadrien G
b4049c484f Forgot a trailing _PLUGIN (#13884) 2019-11-25 16:56:09 -06:00
Andreas Baumbach
5c8e34160d add new versions to py-mistune (#13887) 2019-11-25 16:55:53 -06:00
Tim Haines
7872435753 Add intel-tbb versions 2019.5 to 2019.8 (#13891) 2019-11-25 16:52:46 -06:00
G-Ragghianti
0aab6068ff Improved library access for lm-sensors and implemented use in papi. (#13885)
* Improved library access for lm-sensors and implemented use in papi.

* Fixed comment formatting

* Removed explicit "None" from return of libs().

* Added two new software release versions.
2019-11-25 15:42:14 -06:00
René Widera
9c10b80591 add package cuda@10.2.89 (#13819)
* add package cuda@10.2.89

add CUDA 10.2 support

* CudaPackage: Add 10.2 Conflicts

* CUDA: Modernize Run Environment

See #11115
2019-11-25 13:23:48 -06:00
David M. Rogers
552ffed171 Updated LAMMPS package to use gpu and kokkos options. (#13886) 2019-11-25 13:22:31 -06:00
iarspider
3eb1a0226d Fix ROOT dependencies (for +r variant) (#13839) 2019-11-25 13:02:03 -06:00
Sinan
70e4377348 Mapnik: fix runtime error involving py-pycairo and PDF (#13865)
* fix runtime error involving py-pycairo and PDF

* Update var/spack/repos/builtin/packages/py-python-mapnik/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* fix env setup
2019-11-25 13:01:14 -06:00
Joe Koning
c349759acd Add the py-importlib-resources package (#13854)
* Add the py-importlib_re package

* Rename package to conform with spack naming convention.

* Rename package to py-importlib-resources
Add python depend modules for previous python versions and depends_on python.

* Add whitespaces.
2019-11-25 13:00:45 -06:00
Toyohisa Kameyama
87e757ee93 cctools: fix python related error. (#13802)
* cctools: fix python related error.

* patch bugfix.
2019-11-25 12:57:09 -06:00
Sinan
448e09e5b2 Add latest version of bazel (#13813)
* use bazel commit in #13112, and add version 0.24.1, and corresponding cc_env patch

* undo preferred java version by dodo47

* patch for v0.26

* Update install steps

* Add patches for more versions

* Add unit tests

* Update patches for new Spack env vars

* env is already defined, use spackEnv
2019-11-25 11:59:12 -06:00
Joe Koning
289aa6ad8a py-celery: added new package (#13851) 2019-11-25 16:28:06 +01:00
Joe Koning
be9c551add py-amqp: added new package (#13848)
* Add the py-amqp package

* Add the py-vine dependency.

* Add vine version and python dependency.
2019-11-25 16:26:59 +01:00
iarspider
53c2b618da py-qtpy: enable use with pyqt5, pyside and pyside2 (#13837) 2019-11-25 16:14:57 +01:00
Joe Koning
0cb5460a52 py-kombu: added new package (#13855) 2019-11-25 16:02:03 +01:00
t-karatsu
b8c18068c2 prank: use Spack compilers and remove x86_64 opts from Makefile (#13877) 2019-11-25 15:14:18 +01:00
darmac
3a94c032c7 netperf: added new package (#13876) 2019-11-25 15:12:32 +01:00
darmac
bb6a203fe1 ltp: added new package (#13878) 2019-11-25 14:38:25 +01:00
Hadrien G
fa37387373 ACTS v0.11.0 + adding maintainer (#13880) 2019-11-25 14:33:16 +01:00
darmac
2f2dd879f7 add new package : py-cssselect (#13879) 2019-11-25 14:32:04 +01:00
Oliver Breitwieser
4c4aba5f9e ack: Fix install modifying download cache (#13836)
This makes several installs from the same download cache impossible once
the hash of the used perl-install changes.

Fixes: #13824

Change-Id: I5f10d9d54ae999d0ca7e4171f989dfca2e6a7169
2019-11-24 17:33:49 -06:00
Christoph Junghans
959f52dbf5
tinker: initial commit (#13869) 2019-11-24 10:31:15 -07:00
Christoph Junghans
8b1d800d53
ncurses: don't run strip internally (#13843)
* ncurses: don't run strip internally

* setup_environment -> setup_build_environment

* fix ABI change
2019-11-23 20:47:59 -07:00
Adam J. Stewart
c3c5abb9cc
py-matplotlib backend dependencies needed at runtime (#13867) 2019-11-23 21:23:45 -06:00
Adam J. Stewart
42a0061cb0
Add py-scipy 1.3.3 (#13866) 2019-11-23 16:50:02 -06:00
Joe Koning
c7472e0cbe Add the py-humanfriendly package (#13853) 2019-11-23 19:12:03 +01:00
Adam J. Stewart
e5588880d5 Fix setuptools dependency in py-snowballstemmer (#13844) 2019-11-23 15:25:24 +01:00
Joe Koning
0a14a0c48d Add the py-billiard package (#13849) 2019-11-23 14:14:28 +01:00
Joe Koning
836b6016e4 Add the py-parse package (#13856) 2019-11-23 09:36:29 +01:00
Joe Koning
2c8a867a81 Add the py-vine package (#13857) 2019-11-23 09:35:07 +01:00
Sajid Ali
ff64004a7b likwid: added version 5.0.0 (#13858) 2019-11-23 09:21:59 +01:00
Joe Koning
99650d6caf py-cached-property: added new package at v 1.5.1 (#13850) 2019-11-23 09:20:24 +01:00
darmac
b95961d26b ethtool: new package at version 4.8 (#13864) 2019-11-23 09:17:49 +01:00
Satish Balay
da883f2270 petsc: add version 3.12.2 (#13859) 2019-11-22 20:35:16 -06:00
George Hartzell
48420d0c24 New package: py-wub, with supporting fixes (#13773)
* Add py-wub, with supporting fixes

- add py-wub
- add py-pycmd because py-wub needs it
- update py-statsmodels, which needs at least v0.9.0 to work with
  python3.7 because cython.

* Update based on Adam's comments

* Fix dependency types for py-six in py-wub

* statsmodels tests fail, update comment w/ Issue #

The statsmodels tests weren't run in the previous version of the
package.  If I enable them, the fail.

Update the package comment with the statsmodels issue I opened to
track the problem:
https://github.com/statsmodels/statsmodels/issues/6263

* Update dependency types in py-wub/package.py

* flake8 cleanups

* Make statsmodels tests work

- need to use patsy@0.5.1:
- need to run the tests from within the build/lib* dir
2019-11-22 20:34:43 -06:00
Christoph Junghans
b23d2efd99
votca-*: add v1.5.1 (#13822) 2019-11-21 16:09:03 -07:00
George Hartzell
73038a3f51 Add mg, a gnu-emacs like fork of microemacs (#13812)
* Add mg, a gnu-emacs like fork of microemacs

* Use Package, since not really an Autotools package

Switch from AutotoolsPackage to Package.  Even though mg has a
configure script, it's not really an Autotools package.

* Need to also provide --prefix to configure
2019-11-21 11:40:13 -07:00
Toyohisa Kameyama
bed7e40dcc cbtf-krell: add rpcsvc-proto and libtirpc dependency. (#13800) 2019-11-21 11:38:09 -07:00
Elizabeth Fischer
9a6a19d464 doxygen: added missing dependencies to the package (#10589)
See http://www.doxygen.nl/manual/install.html
2019-11-21 15:30:31 +01:00
t-karatsu
49b9365205 texinfo: fix unescaped braces, and update locale handling (#13815)
* texinfo: Fix unescaped braces for older version.

* texinfo: update locale handling.
2019-11-20 20:54:55 -07:00
Shintaro Iwasaki
71cd91e4c1 update Argobots and BOLT (#13765)
* argobots: update to 1.0rc2

* bolt: update to 1.0rc3

* argobots/bolt: add maintainers

* argobots: use "master" for the master branch
2019-11-20 19:04:46 -07:00
Douglas Duckworth
100fcc2c8e added hmmer v 3.3 (#13793) 2019-11-20 19:04:27 -07:00
Brian Van Essen
2f069b571d Updated versions numbers for Aluminum and Hydrogen. (#13814) 2019-11-20 19:04:01 -07:00
t-karatsu
9cd778f152 ampliconnoise: Change return type of function. (#13766)
* ampliconnoise: Change function type.

* ampliconnoise: updated api call to setup run environment
2019-11-20 16:03:51 -07:00