Commit graph

12924 commits

Author SHA1 Message Date
Adam J. Stewart
41e0b069d7
Fix external numpy package support (#13197) 2019-10-12 20:21:03 -05:00
Adam J. Stewart
3df6b05c04
Add py-setuptools 41.4.0 (#13184) 2019-10-12 20:20:41 -05:00
Adam J. Stewart
ebfd06d248
Add py-pytest 5.2.1 (#13181) 2019-10-12 20:18:31 -05:00
Adam J. Stewart
328583decc
Add py-pluggy 0.13.0 (#13176) 2019-10-12 20:14:12 -05:00
Adam J. Stewart
2ced690efb
Add py-pandas 0.25.1 (#13174) 2019-10-12 20:12:41 -05:00
Adam J. Stewart
50e9dc5e2e
Add py-packaging 19.2 (#13173) 2019-10-12 20:12:19 -05:00
Adam J. Stewart
101c287e7b
Add py-numexpr 2.7.0 (#13172) 2019-10-12 20:11:57 -05:00
Adam J. Stewart
db4d06f953
Add py-importlib-metadata 0.23 (#13168) 2019-10-12 20:08:33 -05:00
Adam J. Stewart
1d7eab10ac
Add py-certifi 2019.9.11 (#13165) 2019-10-12 20:05:00 -05:00
Adam J. Stewart
a59e77e374
Add missing test dependency to py-bottleneck (#13164) 2019-10-12 20:04:34 -05:00
Adam J. Stewart
1078dfb6cc
Add py-atomicwrites 1.3.0 (#13162) 2019-10-12 20:03:01 -05:00
Adam J. Stewart
b18e4ad142
Add missing libiconv dependency to wget (#13161) 2019-10-12 20:02:41 -05:00
Adam J. Stewart
7a43817205
Add missing gettext dependency to watch (#13160) 2019-10-12 20:02:24 -05:00
Adam J. Stewart
6beb5da497
Fix valgrind concretization on macOS (#13159) 2019-10-12 20:02:05 -05:00
Adam J. Stewart
22e9aafe5f
Add SCons 3.1.1 (#13157) 2019-10-12 20:00:28 -05:00
Adam J. Stewart
73b2b2a70f
Add LLVM OpenMP 9.0.0 (#13154) 2019-10-12 19:57:36 -05:00
Adam J. Stewart
94d57446c7
Add libjpeg-turbo 2.0.3 (#13152) 2019-10-12 19:55:44 -05:00
Adam J. Stewart
1e2754f0d2
Add help2man 1.47.11 (#13151) 2019-10-12 19:55:14 -05:00
Adam J. Stewart
681c5bcceb
Add graphviz 2.42.2 (#13150) 2019-10-12 19:54:46 -05:00
Adam J. Stewart
0a8be4e311
Add cmake 3.15.4 (#13148) 2019-10-12 19:52:47 -05:00
Adam J. Stewart
18ab375968
Add utf8proc package (#13144) 2019-10-12 19:40:05 -05:00
Greg Becker
1808ba3c68 install: add --cache-only option (#12729)
* add `--cache-only` option to install
* testing for `--cache-only`
* remove extraneous stage creation at stage destroy time
2019-10-12 11:43:37 -07:00
Nichols A. Romero
ebb5ce4b69 F18 Oct2019 Minor Update (#13192)
* Minor clean-up of package information.

* Add variants, fix dependencies, and add conflicts for compilers that do not support C++17.

* Correct dependency type for CMake.
2019-10-12 12:30:43 -05:00
Todd Gamblin
64bdc3251f checksums: enforce that all mainline packages use sha256 checksums
- Add a test that verifies checksums on all packages

- Also add an attribute to packages that indicates whether they need a
  manual download or not, and add an exception in the tests for these
  packages until we can verify them.
2019-10-12 07:19:43 -07:00
Todd Gamblin
8cbd349cb4 checksums: fix packages that needed new download locations
Some packages had incorrect checksums because they needed to be
downloaded from a new place or the package needed tweaking somehow.
These packages to sha256 and the new checksums have been verified by
fetching over https.
2019-10-12 07:19:43 -07:00
Todd Gamblin
45a9cfcdd7 packages: remove packages that are no longer fetchable
These packages have either been retired or are no longer retrievable from
any site we can find. They also aren't needed by other packages, so we're
removing them from Spack.

- allinea-reports: is now arm performance reports
- globus-toolkit: retired, globus is now a paid service.
- uberftp: used globus-toolkit, github site is retired.
- mpiblast: site is dead; no longer fetchable.
- py-mxnet: site and github are gone
- soap2, soapindel, soapsnp: site is gone, unfetchable
- arlecore: could not verify md5 securely
2019-10-12 07:19:43 -07:00
Todd Gamblin
00f91ab22b checksums: Remove or fix up unfetchable or unverifiable md5 versions
This commit either removes remaining md5 checksums, or it replaces them
with sha256 checksums verified by fetching over https.
2019-10-12 07:19:43 -07:00
Todd Gamblin
62927654dd checksums: use sha256 checksums everywhere
We'd like to use a consistent checksum scheme everywhere so that we can:

    a) incorporate archive checksums into our specs and have a
       consistent hashing algorithm across all specs.

    b) index mirrors with a consistent type of checksum, and not one that
       is dependent on how spack packages are written.

- [x] convert existing md5, sha224, sha512, sha1 checksums to sha256
2019-10-12 07:19:43 -07:00
Matthew LeGendre
87fa7c15fc Add adiak package, version 0.1.1 2019-10-11 21:22:33 -07:00
Massimiliano Culpo
f8a4a3802c Autotools build system to patch config.guess based on a range check 2019-10-11 21:21:57 -07:00
Massimiliano Culpo
8dd95c1705 Fixed options to compile generic code on ppc64 and ppc64le 2019-10-11 21:20:28 -07:00
Patrick Gartung
d248b0e9d5
Fix python3 errors from string and byte concatenation (#13141) 2019-10-11 03:21:45 -05:00
Massimiliano Culpo
fd97f5c491
Fixed constraints in recipes for packages that depends on fftw (#13125) 2019-10-11 07:55:15 +02:00
Nichols A. Romero
884964d551 Fix f18 install method (#13123)
* Install method is broken and not needed. Built-in install method works fine. Just delete.

* Change version to master.
2019-10-10 21:52:29 -05:00
Tamara Dahlgren
93a44c822c tests: cleanup config:build_stage handling (fixes #12651, #12798) 2019-10-10 16:50:05 -07:00
Tamara Dahlgren
87cdfa2c25 Add support for nested "overrides" scopes. 2019-10-10 16:50:05 -07:00
Massimiliano Culpo
b07460ab5f Added NEON to the list of features required for the aarch64 family
Both floating-point and NEON are required in all standard ARMv8
implementations. Theoretically though specialized markets can support
no NEON or floating-point at all. Source:

https://developer.arm.com/docs/den0024/latest/aarch64-floating-point-and-neon

On the other hand the base procedure call standard for Aarch64
"assumes the availability of the vector registers for passing
floating-point and SIMD arguments". Further "the Arm 64-bit
architecture defines two mandatory register banks: a general-purpose
register bank which can be used for scalar integer processing and
pointer arithmetic; and a SIMD and Floating-Point register bank".
Source:

https://developer.arm.com/docs/ihi0055/latest/procedure-call-standard-for-the-arm-64-bit-architecture

This makes customization of Aarch64 with no NEON instruction set
available so unlikely that we can consider them a feature of the
generic family.
2019-10-10 16:24:36 -07:00
Massimiliano Culpo
77444dff10 ArchSpec: fix constraint satisfaction for targets
fixes #13111

Due to a missing case we were treating a single target that was not
equal to the one we were comparing to as a range open on the right.
2019-10-10 16:22:38 -07:00
Adam J. Stewart
7af8c206ac
Add patches and missing dependency to bash (#13084) 2019-10-10 12:48:49 -05:00
Adam J. Stewart
c131a725af
Add mpfr 4.0.2 (#13091) 2019-10-10 12:48:32 -05:00
Adam J. Stewart
06dffaefed
Add tar 1.32 (#13099) 2019-10-10 12:48:16 -05:00
Jannek Squar
02564ef4ab sublime-text: New version, adapt install process (#13074)
* Added new version, reworked installation process

* Removed explicit addition to PATH
2019-10-10 12:13:00 -05:00
Adam J. Stewart
e925dbcefe
Add expat 2.2.9 (#13085) 2019-10-10 12:10:48 -05:00
Adam J. Stewart
f940e8616c
Add gettext 0.20.1 (#13086) 2019-10-10 12:10:19 -05:00
Adam J. Stewart
4d2b300da0
Add isl 0.21 (#13087) 2019-10-10 12:10:03 -05:00
Adam J. Stewart
15d7e2efd5
Add libiconv 1.16 (#13088) 2019-10-10 12:09:46 -05:00
Adam J. Stewart
c570c09cbf
Add libsigsegv 2.12 (#13089) 2019-10-10 12:09:28 -05:00
Adam J. Stewart
db8178d99a
Add latest openssl releases (#13092) 2019-10-10 12:09:02 -05:00
Adam J. Stewart
ace11d857f
Add latest Perl releases (#13093) 2019-10-10 12:08:40 -05:00
Adam J. Stewart
f35c845330
Add pkgconf 1.6.3 (#13094) 2019-10-10 12:08:19 -05:00