* Adding a package for wcs.
* Turning on sbml for wcs.
* The cpp flag needs to be available for wcs.
* Wcs needs SBML to properly define the namespace.
* Flake8 fixes.
* Fixing the help string with the description.
* Changing cpp to use the new variant syntax.
* Fixing flake8 errors.
* Forgot to delete one last fixme comment.
* Spack "develop" needs to link to repo "devel"
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Robert Blake <rob.c.blake.3@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Cray: fix Blue Waters support
* pkg-config env vars needed on Blue Waters
* cray platform: fix support for user-build MPI on cray machines
* reintroduce cray environment cleaning behind cnl version guard
* cray platform: fix support for user-build MPI on cray machines
Co-authored-by: Gregory <becker33@llnl.gov>
* Add new package: py-devlib
* Update var/spack/repos/builtin/packages/py-devlib/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* add depends
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* [hsf-cmaketools] add package
* fix formatting
* Apply suggestions from code review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* [hsf-cmaketools] remove cmake_prefix_path which is set already by spack
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
gcc 9.3.0 and glibc 2.31 (found in the base install of Ubuntu 20.04)
cause the gcc package to error during build with the error:
"size of array 'assertion_failed__####' is negative"
Previous to this fix, the error was resolved for v8.1.0 <= gcc <= v9.2.0
via two patches.
This fix backports those patches for v5.3.0 <= gcc <= v7.4.0
Potentially these patches need to be backported to versions of gcc
before v5.3.0, but other compile issues need to be resolved for earlier
versions of gcc first.
Fixes#16968
* intel-tbb: Fix for #16938 add custom libs method
Override the libs method to look for libraries of form libtbb*
(instead of inherited which looks for libintel-tbb*)
* Fixing pre-existing flake8 issues
* py-flake8: add version 3.8.2
* This version depends on different versions of py-pycodestyle
and py-pyflakes
* When built for python@:3.7, this depends on the
py-importlib-metadata backport library
* py-pycodestyle: add version 2.6.0
* py-pyflakes: add version 2.2.0
Builds can be stopped before the final install phase due to user requests. Those builds
should not be registered as installed in the database.
We had code intended to handle this but:
1. It caught the wrong type of exception
2. We were catching these exceptions to suppress them at a lower level in the stack
This PR allows the StopIteration to propagate through a ChildError, and catches it
properly. Also added to an existing test to prevent regression.
