Commit graph

25000 commits

Author SHA1 Message Date
Todd Gamblin
2badd6500e unparse: Make unparsing consistent for 2.7 and 3.5-3.10
Previously, there were differences in the unparsed code for Python 2.7 and for 3.5-3.10.
This makes unparsed code the same across these Python versions by:

    1. Ensuring there are no spaces between unary operators and
       their operands.
    2. Ensuring that *args and **kwargs are always the last arguments,
       regardless of the python version.
    3. Always unparsing print as a function.
    4. Not putting an extra comma after Python 2 class definitions.

Without these changes, the same source can generate different code for different
Python versions, depending on subtle AST differences.

One place where single source will generate an inconsistent AST is with
multi-argument print statements, e.g.:

```
    print("foo", "bar", "baz")
```

In Python 2, this prints a tuple; in Python 3, it is the print function with
multiple arguments.  Use `from __future__ import print_function` to avoid
this inconsistency.
2022-01-12 06:14:18 -08:00
Todd Gamblin
b324fe5d95 externals: add astunparse
Add `astunparse` as `spack_astunparse`. This library unparses Python ASTs and we're
adding it under our own name so that we can make modifications to it.

Ultimately this will be used to make `package_hash` consistent across Python versions.
2022-01-12 06:14:18 -08:00
Andrew W Elble
a38cdddd37
perl-tk: add missing dependencies (#28240) 2022-01-12 14:53:25 +01:00
Dylan Simon
2cf22ad5f2
e2fsprogs: fix non-root install (#28255) 2022-01-12 14:52:46 +01:00
Harmen Stoppels
c8e01752a1
Use depends_on over load in lmod module files generated by Spack (#28352) 2022-01-12 13:29:22 +00:00
snehring
640a4f7dcd
poamsa: fix build errors for gcc10+ (#28262) 2022-01-12 14:09:55 +01:00
Danny McClanahan
435a241869
yarn: add runtime dependency on node-js@4.0: (#27654) 2022-01-12 13:05:49 +00:00
H. Joe Lee
a5ff3206f9
HDF5 GPU VFD: add new package. (#28272) 2022-01-12 13:59:51 +01:00
Melven Roehrig-Zoellner
5bb5bf3efb
ITensor: add v3.1.10 and 'shared' variant (#28370) 2022-01-12 05:20:10 -07:00
Adam J. Stewart
55a62a1ee5
py-async-timeout: fix checksum issue (#28329) 2022-01-12 10:53:12 +01:00
Nils Leif Fischer
7fa81a66af
libtheora: disable docs by default (#28330) 2022-01-12 10:24:58 +01:00
Nils Leif Fischer
4e0372b9b7
curl: add support for external detection (#28331) 2022-01-12 10:24:10 +01:00
Massimiliano Culpo
5476e5d035
Remove tut since it requires deprecated Python 3.6 (#28360) 2022-01-12 09:34:50 +01:00
kwryankrattiger
363a565ce3
Packaging: Virtual package for libllvm (#27200)
Add an abstraction around libllvm to allow libllvm
providers to be specified for all packages.

This is targeting allowing mesa to build against
llvm-amdgpu or intel-llvm or llvm or any other
custom llvm variant that arises for specific GPU
toolchains
2022-01-11 13:28:13 -08:00
Erik Schnetter
d4a468c160
memkind: add v1.12.0 (#28306) 2022-01-11 11:23:36 -07:00
Erik Schnetter
6690bb7411
openblas: New version 0.3.19 (#28308) 2022-01-11 16:55:23 +01:00
Adam J. Stewart
2ab871dd17
py-aiohttp: switch to PyPI tarball (#28333) 2022-01-11 14:33:02 +01:00
Adam J. Stewart
2ea8abef34
Open3D: add missing LLVM dep (#28334) 2022-01-11 14:32:34 +01:00
Erik Schnetter
67d9abb5f1
ffmpeg: add v4.4.1 (#28300) 2022-01-11 14:21:43 +01:00
Harmen Stoppels
f611eb0283
hdf5: prefer stable over experimental releases (#28340) 2022-01-11 10:32:28 +01:00
Harmen Stoppels
78debc1143
mbedtls: add v2.16.12, v2.28.0 and v3.1.0(#28281) 2022-01-11 10:28:58 +01:00
Adam J. Stewart
7b76e3982f
Deprecate Python 2 installations (#28003)
* Deprecate Python 2 installations

* Deprecate py-python-meep

* Deprecate older easybuild backend libs

* Deprecate Python 3.6

* Deprecate miniconda2
2022-01-10 15:45:35 -06:00
Erik Schnetter
675210bd8b
automake: New version 1.16.5 (#28299) 2022-01-10 21:33:14 +01:00
Erik Schnetter
0236e88af4
gawk: New version 5.1.1 (#28301) 2022-01-10 21:32:53 +01:00
Erik Schnetter
c939af8185
gdbm: New version 1.22 (#28302) 2022-01-10 21:32:40 +01:00
Erik Schnetter
33d8e8f31c
grep: New version 3.7 (#28303) 2022-01-10 21:32:33 +01:00
Erik Schnetter
f678d5818f
lorene: Beautify package title in documentation (#28305) 2022-01-10 21:32:20 +01:00
Erik Schnetter
4ef8e15ed3
wi4mpi: New version 3.5.0 (#28313) 2022-01-10 21:31:30 +01:00
Erik Schnetter
09ca7c4d9c
wget: New version 1.21.2 (#28312) 2022-01-10 21:31:13 +01:00
Erik Schnetter
76d9adae8c
openssl: New version 1.1.1m (#28310) 2022-01-10 21:30:58 +01:00
Peter Scheibel
9f7fb6d01a
stage.steal_source: preserve symlinks
This avoids dangling symlink errors. ignore_dangling_symlinks option would be more-targeted but is only available for Python >= 3.2 (#28318)
2022-01-10 10:10:49 -08:00
Adam J. Stewart
cc32b08205
Python: set default config_vars (#28290)
* Python: set default config_vars

* Add missing commas

* dso_suffix not present for some reason

* Remove use of default_site_packages_dir

* Use config_vars during bootstrapping too

* Catch more errors

* Fix unit tests

* Catch more errors

* Update docstring
2022-01-10 12:00:06 -06:00
Marcus Boden
5958306466
New packages: google-crc32c and py-google-crc32c (#28293) 2022-01-10 08:58:02 -06:00
Erik Schnetter
464d294b63
z3: New version 4.8.14 (#28314) 2022-01-10 14:31:52 +01:00
Erik Schnetter
b7f4a421e4
hwloc: New version 2.7.0 (#28298) 2022-01-10 12:00:51 +01:00
Peter Brady
fe64afb479
New package: petaca (#28326)
* Add the petaca fortran/c package

* Adopt date for version name and remove variants
2022-01-09 19:49:49 -05:00
luker
0277067e5f
blaspp: set BLA_VENDOR for cray (#28104)
* for Cray's libsci in blaspp, set BLA_VENDOR=all

* Update package.py

* Update package.py

* Update package.py
2022-01-08 15:41:50 -05:00
Adam J. Stewart
334102addd
SQLite: add new version/variant (#28204) 2022-01-08 12:57:57 -06:00
Erik Schnetter
52d475e89b
openssh: New version 8.8p1 (#28325) 2022-01-08 13:10:28 +01:00
Martin Diehl
2bb844ee0e
Damask improvements (#28178) 2022-01-08 06:50:38 -05:00
Jógvan Magnus Haugaard Olsen
897616f073
Dalton package: add versions and variants (#28226)
* Update existing 2020.0 version to use tag
* Add versions 2018.2 and master
* Add patches for GCC/Intel
* Use MPI compiler wrappers when +mpi
* Constrain CMake build dependency (need >= 3.1)
* Add variants for optional components (e.g QFIT library)
2022-01-07 18:59:17 -08:00
Anton Kozhevnikov
34f0222fdd
ELPA package: don't check threading support during build (#28227)
./configure tries to execute an MPI test, which is not possible on
most HPC platforms (if you don't build on a compute node), so this
check is disabled to allow the build to proceed. Ideally we could
check this by placing constraints on the MPI that Spack builds (e.g.
require building a version that is guaranteed to have threading
support).
2022-01-07 18:13:46 -08:00
Peter Brady
d125bdfaa0
Catch2 package: add versions 2.13.8 and 3.0.0-preview4 (#28297) 2022-01-07 16:55:49 -08:00
Satish Balay
6a60201e80
petsc, py-petsc4py: add versions 3.16.3 (#28277) 2022-01-07 17:15:27 -06:00
Glenn Johnson
a3f5b712d3
py-pyzmq: adjust constraints for python-3.9 (#28264)
Version 18.1 builds with python-3.9
2022-01-07 15:08:02 -06:00
Filippo Spiga
b2336402a7
NVIDIA HPC SDK package: add version 22.1 (#28288) 2022-01-07 12:02:46 -08:00
Glenn Johnson
5091dc2124
r-kegg-db: mark deprecated, removed from bioconductor-3.13 (#28271) 2022-01-07 11:17:36 -07:00
Robert Cohn
7bed76786d
py-matplotlib: fix config for oneapi compiler (#28265)
* py-matplotlib: fix config for oneapi compiler

* Small change to trigger CI restart
2022-01-07 11:17:14 -07:00
Glenn Johnson
0e45ad2d7f
r-illuminahumanmethylationepicmanifest: remove invalid homepage (#28269) 2022-01-07 10:59:19 -07:00
Sebastian Pipping
43e064880e
uriparser: Add latest release 0.9.6 with security fixes (#28291) 2022-01-07 10:14:11 -07:00