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Author SHA1 Message Date
Oliver Breitwieser
4c4aba5f9e ack: Fix install modifying download cache (#13836) 
This makes several installs from the same download cache impossible once
the hash of the used perl-install changes.

Fixes: #13824

Change-Id: I5f10d9d54ae999d0ca7e4171f989dfca2e6a7169
 2019-11-24 17:33:49 -06:00
Christoph Junghans
959f52dbf5
tinker: initial commit (#13869) 2019-11-24 10:31:15 -07:00
Christoph Junghans
8b1d800d53
ncurses: don't run strip internally (#13843) 
* ncurses: don't run strip internally

* setup_environment -> setup_build_environment

* fix ABI change
 2019-11-23 20:47:59 -07:00
Adam J. Stewart
c3c5abb9cc
py-matplotlib backend dependencies needed at runtime (#13867) 2019-11-23 21:23:45 -06:00
Adam J. Stewart
42a0061cb0
Add py-scipy 1.3.3 (#13866) 2019-11-23 16:50:02 -06:00
Joe Koning
c7472e0cbe Add the py-humanfriendly package (#13853) 2019-11-23 19:12:03 +01:00
Adam J. Stewart
e5588880d5 Fix setuptools dependency in py-snowballstemmer (#13844) 2019-11-23 15:25:24 +01:00
Joe Koning
0a14a0c48d Add the py-billiard package (#13849) 2019-11-23 14:14:28 +01:00
Joe Koning
836b6016e4 Add the py-parse package (#13856) 2019-11-23 09:36:29 +01:00
Joe Koning
2c8a867a81 Add the py-vine package (#13857) 2019-11-23 09:35:07 +01:00
Sajid Ali
ff64004a7b likwid: added version 5.0.0 (#13858) 2019-11-23 09:21:59 +01:00
Joe Koning
99650d6caf py-cached-property: added new package at v 1.5.1 (#13850) 2019-11-23 09:20:24 +01:00
darmac
b95961d26b ethtool: new package at version 4.8 (#13864) 2019-11-23 09:17:49 +01:00
Satish Balay
da883f2270 petsc: add version 3.12.2 (#13859) 2019-11-22 20:35:16 -06:00
George Hartzell
48420d0c24 New package: py-wub, with supporting fixes (#13773) 
* Add py-wub, with supporting fixes

- add py-wub
- add py-pycmd because py-wub needs it
- update py-statsmodels, which needs at least v0.9.0 to work with
  python3.7 because cython.

* Update based on Adam's comments

* Fix dependency types for py-six in py-wub

* statsmodels tests fail, update comment w/ Issue #

The statsmodels tests weren't run in the previous version of the
package.  If I enable them, the fail.

Update the package comment with the statsmodels issue I opened to
track the problem:
https://github.com/statsmodels/statsmodels/issues/6263

* Update dependency types in py-wub/package.py

* flake8 cleanups

* Make statsmodels tests work

- need to use patsy@0.5.1:
- need to run the tests from within the build/lib* dir
 2019-11-22 20:34:43 -06:00
Christoph Junghans
b23d2efd99
votca-*: add v1.5.1 (#13822) 2019-11-21 16:09:03 -07:00
George Hartzell
73038a3f51 Add mg, a gnu-emacs like fork of microemacs (#13812) 
* Add mg, a gnu-emacs like fork of microemacs

* Use Package, since not really an Autotools package

Switch from AutotoolsPackage to Package.  Even though mg has a
configure script, it's not really an Autotools package.

* Need to also provide --prefix to configure
 2019-11-21 11:40:13 -07:00
Toyohisa Kameyama
bed7e40dcc cbtf-krell: add rpcsvc-proto and libtirpc dependency. (#13800) 2019-11-21 11:38:09 -07:00
Elizabeth Fischer
9a6a19d464 doxygen: added missing dependencies to the package (#10589) 
See http://www.doxygen.nl/manual/install.html
 2019-11-21 15:30:31 +01:00
t-karatsu
49b9365205 texinfo: fix unescaped braces, and update locale handling (#13815) 
* texinfo: Fix unescaped braces for older version.

* texinfo: update locale handling.
 2019-11-20 20:54:55 -07:00
Shintaro Iwasaki
71cd91e4c1 update Argobots and BOLT (#13765) 
* argobots: update to 1.0rc2

* bolt: update to 1.0rc3

* argobots/bolt: add maintainers

* argobots: use "master" for the master branch
 2019-11-20 19:04:46 -07:00
Douglas Duckworth
100fcc2c8e added hmmer v 3.3 (#13793) 2019-11-20 19:04:27 -07:00
Brian Van Essen
2f069b571d Updated versions numbers for Aluminum and Hydrogen. (#13814) 2019-11-20 19:04:01 -07:00
t-karatsu
9cd778f152 ampliconnoise: Change return type of function. (#13766) 
* ampliconnoise: Change function type.

* ampliconnoise: updated api call to setup run environment
 2019-11-20 16:03:51 -07:00
健美猞猁
1e52aa750a find-circ: a new package. (#13767) 
* find-circ: a new package.

* flake8.
 2019-11-20 16:02:34 -07:00
健美猞猁
5e9ca0f939 miranda: a new package. (#13768) 2019-11-20 16:01:41 -07:00
Figroc Chen
ace47cecbe tensorflow-serving-client: add new package (#13771) 2019-11-20 16:01:04 -07:00
t-karatsu
af9281b843 bpp-suite: Clarify 'isinf' function's namespace. (#13777) 2019-11-20 15:52:44 -07:00
David Hows
ad4986be94 Fix for overlong shebang in valgrind (#13779) 
Fix for some overlong shebangs in valgrind. Borrowed from verrou/package.py
 2019-11-20 15:50:14 -07:00
noguchi-k
894267e02e py-numexpr3: fix version (#13781) 2019-11-20 15:49:13 -07:00
Ken Raffenetti
f25cf16b11 mpich: Add 3.3.2 (#13790) 2019-11-20 15:48:11 -07:00
Justin S
63874db562 genrich: new package at 0.6 (#13791) 2019-11-20 15:47:36 -07:00
Justin S
38ae7ab6cd sentieon-genomics: add 201808.07 (#13794) 2019-11-20 15:46:22 -07:00
Adam J. Stewart
4e4e3d192e
Add old version of py-gast (#13806) 2019-11-20 15:21:03 -07:00
Adam J. Stewart
0d1e9c6e06
Add py-google-pasta package (#13807) 2019-11-20 15:20:47 -07:00
Adam J. Stewart
d43364d679
Add new py-grpcio package (#13808) 2019-11-20 15:20:28 -07:00
Adam J. Stewart
d19eb21181
Add c-ares 1.15.0 (#13809) 2019-11-20 15:20:08 -07:00
Adam J. Stewart
33059daff4
Add old versions and missing dependencies to py-protobuf (#13811) 2019-11-20 15:19:47 -07:00
Adam J. Stewart
ea42d67a9a
Add old version of jdk (#13805) 
* Add old version of jdk

* setup_environment -> setup_build_environment
 2019-11-20 15:19:22 -07:00
Brian Van Essen
66cf530459 Added package for Clara command line parser (#13763) 
* Added package for Clara command line parser
 2019-11-20 00:12:43 -07:00
albestro
f25a4ab089 add MAX_CPU_COUNT variant to HPX package (#13769) 
* add MAX_CPU_COUNT variant to HPX package

* compatibility with python2

* correct variant description

Co-Authored-By: Mikael Simberg <mikael.simberg@iki.fi>

* add maintainers list
 2019-11-19 12:49:32 -07:00
George Hartzell
d00be588e3 zlib: use setup_build_environment for build env (#13786) 
zlib was using the deprecated setup_environment call.  Now it's using
the current setup_build_environment.

(noticed this in some `spack -d` output)
 2019-11-19 12:29:35 -07:00
ktsai7
bb0667ceaf add more legion version and expose more flecsi options (#13741) 
* add more legion version and expose more flecsi options

* formatting

* update version pointing to master to master

* fix indentation

* Update package.py

* Update package.py

* Update package.py

* Update package.py

* Update package.py

* Update package.py

* use self.run_tests

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>

* Update package.py

* Update package.py

* Update package.py

* Update package.py
 2019-11-18 23:51:41 -07:00
Greg Becker
99dfff4475
binary distribution: relocate text files properly in relative binaries (#13578) 
* Make relative binaries relocate text files properly
* rb strings aren't valid in python 2
* move perl to new interface for setup_environment family methods
 2019-11-18 14:13:42 -07:00
健美猞猁
e433a5dc0b py-rnacocktail: a new package. (#13761) 
* py-rnacocktail: a new package.

* flake8.

* Add build-time dependencies.
 2019-11-18 14:09:39 -07:00
albestro
e0746a2a07 fix libxml2 url (#13770) 
http to https
 2019-11-18 10:58:16 -07:00
Xavier Delaruelle
e5b3202352 environment-modules: add version 4.4.0 (#13772) 2019-11-18 10:53:06 -07:00
Massimiliano Culpo
ab62ad463d
py-xattr: fix a package that was pointing to a fork (#13685) 
The package now points to the official github repository for master
and to PyPI for release versions.
 2019-11-18 12:09:47 +01:00
oracleLee
686e613e94 Update scalpel package.py (#13746) 
* Update package.py

Update scalpel version 0.5.4

* Update package.py
 2019-11-17 12:45:16 -07:00
Cyrus Harrison
d3c1547dba update to add ascent 0.5.0 release (#13709) 
* fix metis src dl url

* update ascent, vtk-h and vtk-m recipes

* update conduit package

* fix vtk-m shas

* mfem conduit fix

* use vtk-h develop

* fix issue with stripped include paths in mfem

* more metis fixes

* simpler fix for mfem conduit include issue

* finish mfem changes

* pin to cmake 3.14, since we hit cuda issues with 3.15

* add rtd theme as dep for ascent

* add vtk-h 0.5.0 release, update ascent to use it

* add ascent 0.5.0 release

* fix cmake pin to allow all vers of 3.14

* fix format string error in mfem pkg

* review fixes for mfem pkg

* review fixes for vtk-h and vtk-m packages

* address review comments for ascent pkg

* changing default off of develop broke downstream use

* revert prefed
 2019-11-17 12:36:14 -07:00